Array 1 2739-1909 **** Predicted by CRISPRDetect 2.4 *** >NZ_BILX01000107.1 Paenibacillus ehimensis NBRC 15659 PEH01S_CON0107, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 2738 30 100.0 35 .............................. CGTGATAAACTTTGGGTGAAGACGAACTATCAAGT 2673 30 100.0 37 .............................. GAGCCCAGCCAACTTCTTCCCGGATCCGAAGGTGCAC 2606 30 100.0 38 .............................. TTTGACGGCAGGATGGTCGCGGGCTTCGAAACTCCCGA 2538 30 100.0 36 .............................. TTCACTTTGATTTGTTTAAAACGGTCTGACAGAGAC 2472 30 100.0 35 .............................. ATCGCCGCGAGAAGGCCTTCCAAGAGGTTGACCTC 2407 30 100.0 37 .............................. TATGAAATTACAACTTGTCCTGAATTTTTACATCGTC 2340 30 100.0 41 .............................. TGGGGCAAGAGATAGCTCGAGTGATGAGTGGGATTCTGCCA 2269 30 100.0 38 .............................. GTTTTACAAGAATTTAATCTAAAGCCTTCTGATTTTAG 2201 30 100.0 37 .............................. TGGATAACACCATTAAGGGATTAACAGCCGGATTAGG 2134 30 100.0 38 .............................. GGCTTCGATACACGGCTGCATATTGAAGTTTATTTTCG 2066 30 96.7 35 .........A.................... TTTCTTTTCGCGGGTTACTCCTATGCGGAACCTCA 2001 30 100.0 33 .............................. AGGTCATGACCATTCAGATAAACGACGCCGATC 1938 30 83.3 0 CC.C..GT...................... | ========== ====== ====== ====== ============================== ========================================= ================== 13 30 98.5 37 GTTTAGAACGTACCTATGAGGAATTGAAAC # Left flank : TCGAAGCCTTTTTCTTTGAACAGCTTTATGGACTGTGCGAAAATGAGATTTTTCAGTTCTTGCTTTCGGGATGCTCTAAGCATGGGGGAGGGTCACCGCCTTATTAAGAAAATGACTTTGGTCATTTTATGACTTTGGTCATGATTTTACTCCTGTTTTTGGTATTGTTCAAGTATCAAAAAAGATACGAAGTATTCGAAGTTTGTGGTAAGGTAGAAGTGCGAGGTTTTTCCAACGATTATTTATTGAAAAAGGCCGGGAATTGAGGAGTACCAAAAATATTTGCAAAGGCTTAAAATTCAGTAAATCACGATCTTGGAAAAAGGTGGACGAAAGCTTATAATTCAATTATGCAATTTGTCGTCGACCCCCAATGCTGCAAAAATCCCGGGGGATCGACGACAAGGATAGCAGCGCGGTAGAAGGGATTACGGTATTTTCTGTGGTCGATATATCATTTTGGGACATGTAGAAATGGCTTAACGGCGGGATTTTGATGG # Right flank : ATTTTCCCAAAAGCGCGCATACTAAGAACAACTTGGATGAGTCCGGCATGGAAGGAATGGATGCAAAGAGGCAGGAGGCGGAACAGGCTGGGGACGGCACCGCGGCCGCAGCGTATGAGCAGCAGGCCGATTACATTCATTGGCTGGCGAATGAGCTAAGAAAAGCATCCGGGCAGCCGACGACATAGAATTTAAAGGGCAAGGGTCACTACCGTTTATATTGCGATGTGACCCTTGTTTCTAGCGTTTTCTCTTAAAATTAATAACTAATGCCAAGGTAGCAAGGGGGCCGATAATAAGAGAAATGAAAAACCAAAATAATCCATTGAGATTCTTACTTTGAGCAAGCCCTGTGTTTACAAGCGCAAGCGAAATCCAGTAAATAAGATGATATTCTATCTAAAGCACCTCCCAATTATTTCAAGGTTGGGATGCTGTCATTATACCAAATTTTTTGCCATGCCTTTATTGATGTTATTTAGAGTATTCCCTTCAAATTT # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAGAACGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 2 6324-5316 **** Predicted by CRISPRDetect 2.4 *** >NZ_BILX01000107.1 Paenibacillus ehimensis NBRC 15659 PEH01S_CON0107, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================================================================================================================================================================================================== ================== 6323 30 100.0 39 .............................. CCTTTTAAAGAAGCGAAAGGACCGAATGGCTGCGGAAAG 6254 30 100.0 36 .............................. CCCGTCTTGACCTCGCTGTAGACGAAAAGAGGTACC 6188 30 100.0 35 .............................. CCGTATGCCTGTCTATATGACAAGCAAATTTTTGT 6123 30 100.0 38 .............................. CTTCACGTCCTTTCCGGAATTCATGGCTGCCGAGTTGG 6055 30 100.0 37 .............................. ACGCCGTTCGCCAAGACAACAAACTTTGTGATCTTCC 5988 30 96.7 38 ............T................. TGGTATGGCGGTATACGTACGGATTCCATCGGGACGAC 5920 30 100.0 36 .............................. CCGTTGATTTGTGTGTTGACAGAGTTTATCAAACTG 5854 30 100.0 37 .............................. CGACGATCTTCTCCTGTACGGCCGCCGGCACCAGTAC 5787 30 100.0 39 .............................. AGCGCATAGAAAACGAAGTAGAACCGGAGGAAGCAGCGG 5718 30 100.0 37 .............................. CCCGCTACTTTTTCGTCGGCAGCGGGAGTTTCCAACG 5651 30 100.0 210 .............................. AGCCCAGCAATGTCTGCGACGGTTGCGGCCTTGGAAAAAGGTGGGCGAAGGCTTTTAATTATGCAATTTGTCGTCGACCCCCAATGCTGCAAAATATCGGGAGATCGACGACAATGATAGCAGCGAGGTGGAAGGGGTTACAGTTATTTACTCTAGTCGATATGTAATTTTGGGATATATAGAAATGGCTTAACGGCGGGATTTTTATGG 5411 30 83.3 36 ....A....A......CA...........T TCGCTTAGCGCCGTCGCAGTTGGCAGCGCAGCCGAA 5345 30 90.0 0 ....A............A........T... | ========== ====== ====== ====== ============================== ================================================================================================================================================================================================================== ================== 13 30 97.7 52 GTTTTGAACGTACCTATGAGGAATTGAAAC # Left flank : ATGGGCGAGAAAAGCTATGAGCCGTTCGAGGCTTTATGGTAAGGCCGGGCGTGTGTTAGCTGGTTCTGGAAAGAGGTGATGCTTCTGTTTGCGATCATTGTGTACGATGTTGGGGAGAAACGCGTAGCCCGCGTACTCAAGACATGCCGTAAATATTTGAACTGGGTCCAAAACTCCGTGCTTGAAGGGGAAATTACGGAGACAAATCTGAAGAAACTGAAGGCGGAGCTGAATAAAATTATCGAAGACGATGAGGACTCGGTTATTTTTTATACGTGGCGTACCCAAAAGTACTCGGATCGGGAGATCATGGGGTTGGAAAAAGGTGGACAAAGCCTTATAATTTAACTATGTTTTTTGTCGTCGACCCCCAATGCTGCAAAAACACCCGGGGGTCGACGACAACGATAGTCGCGCTGCAGAAGGGATTGCGGCGGTAGCTGTTGGAGAAACGAAATTGCGGGATATGCGGGAAAGGCGTAGTAGAGGGATTGTTACGG # Right flank : GGGAGCCCGTAACCTGGGTATTGTTAAAAGGAGTTGAGCGGATGACGACGGAAGTACGAATGGCTACAGCCGACGATGCGGCAGACCTTGCAAGATTGAACCAAGCTTTTAACGGCGGGGAGTTGTTGCCTGCGTCGGAAATTATTGAGAGCATGAACCGAAACAGCGAATTGATCGTTGTAGCGACCATGAATGGTAGAGTCGTAGGCTTTGCTTGCGCACAAAGCTACAAGTCGTTTTGCTATCGGGAAGGGCTGGGAGAAATCACCGAAATGTATATCGAACAAGCAGCCCGGAGAAAGGGACTTGCCACCTCCATGATTGCCTTGTTGGAAGACAAGCTGGCAGAGCGCGGAGTAAAGGTGATAAAAATACTAACGGGCAGCGATAACGACCCGGCCATCAAAACCTATGAACGCTGCGGTTATGTTAAAGACGATGAGATCTTTCTTCAAAAAGAACTATAGCCTGTGGCGGGAGAGTTAAAAAATGACGGACCA # Questionable array : NO Score: 7.68 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:-1.46, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGAACGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 3 16355-16983 **** Predicted by CRISPRDetect 2.4 *** >NZ_BILX01000107.1 Paenibacillus ehimensis NBRC 15659 PEH01S_CON0107, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 16355 30 100.0 35 .............................. CACGAACACATGTACGGTTCATAGCTCGTTCACAA 16420 30 100.0 37 .............................. AACAAAAACTCCTGTGTGATGACGTTCGCCATCGGTA 16487 30 100.0 36 .............................. CAGCATGACCGAGGCACGCAGAATGGCCGCAAGCGA 16553 30 100.0 37 .............................. TCGGCCGTCCGTGCTAGGGCGGTCTTTTGTTTTGTCT 16620 30 100.0 37 .............................. AAGCAAACAGCAACCCTGTCGCCCGGCTGAACGCCTG 16687 30 100.0 37 .............................. TCGGTTAATCCAGATGACATGTCGGAGGGCTCATTGA 16754 30 100.0 38 .............................. CGTGAAATGGTACTTTACGCTCAAGTTTTTGATTGCCG 16822 30 96.7 35 ................C............. ATCTCTCCATTGATGTCATGCAGCGCGGCGTAGTA 16887 30 93.3 37 ................CT............ AACAACGTTTCTCGGAGAACCGTACTCGCCTCGATCG 16954 30 93.3 0 ...............T.A............ | ========== ====== ====== ====== ============================== ====================================== ================== 10 30 98.3 37 GTTTTGAACGTACCTATGAGGATTTGAAAC # Left flank : TTCAAAACATACCGCCCTTGTAGCGGATATTGTTCTTGAGACCCATGTTAGCGCATGAGCCTCCTAATTGAACATATCATGATTGAAATTATACTGGCAACTATAAATAGAAAAAACCCGGTCAAAATCAAGGAAAAAGCTGTTTATCATCGCTCACTCCATTTATGCTTAAACTCCACGTAGTTTGTTTCGCTTCTAATTTCAGACATGATCGGGGCTCGCTAATTTGACACTCAAACAAAGAATTATGTTATTTATTTCCTTTGAAGTCCATTCAAGCTACAATATGCTACAGGTAAATAATTTTAAAAGCTTGGAAAAAAGAGGACAAATCATTATAATTTAGCTATGTTCATTTTGTCGTCGACCCCCAATGCTGCAAAAAAGCCGGGGGATCGACGACAAGGATAGCCGCGTGGCGAAAAGGATTGTGACGCTAGCCGTTAGAAAAACTAAATTATGGGATATGCAGGAATGGCGTAGTGGCAGGGTTTTTATGG # Right flank : CATGGTCGGATGAACTGTACCCCTCCTCTATCTCTTTGTTTTGAACGTACCTTT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGAACGTACCTATGAGGATTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 17312-17145 **** Predicted by CRISPRDetect 2.4 *** >NZ_BILX01000065.1 Paenibacillus ehimensis NBRC 15659 PEH01S_CON0065, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 17311 33 93.9 34 .GG.............................. CTCACCGATCGAAGGACCAAAGGAAGATTGGCGA 17244 33 100.0 34 ................................. TTGGAAGACTGGACTTGACAAAACTGCTAAGTCT 17177 33 97.0 0 ............T.................... | ========== ====== ====== ====== ================================= ================================== ================== 3 33 97.0 34 CTCGTTTTGAACGTACCTATGAGGAATTGAAAC # Left flank : TGAACCGATCAGTCCAGAAAGGATGGAAAGAAGACTTGCTTTTTAACTGTCTGCCTGTCTCGATCAGTATGAGAATCCGCAGCATGCCTACACGAAGTCGCTGCTTCGTTAAAGTGAAGAAGGGTCATTGGGTGGCGATTGCTGAAGGGGAGGTTTAGGTAGGGTTTGGGAGAGCGGGCGGGAGTTATAACGAAAAAATTAGGAGTCGGTTCCGTTCTCTGTGTTCAGCCGCTAGAAAAAATTGAAGGTAAGGACACTAAAGAGGTAGAATTAGCATAAGCGATATAGGAACAAACCAAAGCAGAGTTGAGTTCTGTTGGAAAAAAACGGGTAAAGCTTTATAATGGAACTGCGCATTTGTGTCGTCGACCTCCAATGCTGCAAAAAAGCCGGGGGATCGACGACAACGAGGGCCGCGCGAGAACAGACATTTTGGTAGTTGGCGTGAGTGAGATTTGTTTTTTTTATATGTGAAAAATGGCGTCATTGCGGCGTTTTTG # Right flank : ATTTGCGCCAGCAATTCTTTCCAATCCATTGTGTCGTTTTGAACGTACGAGGATTGTTTCAGGGATCAGGACTTACTTTTCAATTGGAGCCGCTACCACCGAGTACGCGCAGCTCAATCGCTACAGGAGCAAACGGAAATGCTGCGCGTGCGGTTATGCGACCGACCCGGATTTATACGAAAGTTGATGAATTTGATTGCAAACTACTCGCTTGAACAATACGACAAGGAGGCCAATGCTTGATGCAGGGGGAGCCAATACGATTATCGGTACATGGATGAGCCGACATGGAAGGAGCTGGACGTAAACGGCAGGAGACGGAGCGTGCCGGGGACGGCACCACTGCCGCGGCTATCAGCAACAGGCCGATTATATTCAATGGCTAGTGAACGAGCTGAGGAGTCCGTCTGGGTAACTGGAACAATAGTAAAAGACCCCCGTCGGCTATGCTGACAGGGGAAAGCAAACTTTTAGTGTACTTTTTTAGACTTCTTCGTAAA # Questionable array : NO Score: 8.52 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCGTTTTGAACGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.61%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : NA // Array 2 22657-21825 **** Predicted by CRISPRDetect 2.4 *** >NZ_BILX01000065.1 Paenibacillus ehimensis NBRC 15659 PEH01S_CON0065, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 22656 30 96.7 38 ....G......................... TTCAAGGCGAAATCACGCTTGACCTGCCGATCACTATC 22588 30 96.7 36 ....G......................... CCGGATCTTCTCGGCCAGTTCTTTCTTCTGCCGCTC 22522 30 96.7 36 ....G......................... CCTCCAAACCTAACTTTTCCGAGGTAGCGATCATTA 22456 30 96.7 38 ....G......................... GGGGGCTGTCTGCTCGCTTCCCTCCGCCTCTCAGCTCT 22388 30 100.0 34 .............................. TAAGACCGACCAAGTGTAAGCAAGCGTACAAACG 22324 30 100.0 36 .............................. CCTGCATTATCTATAGTCCGGGCAGACACCGTTGTC 22258 30 100.0 37 .............................. TCCACTAGGCTGCCCTCATGGAAGGATGCACGTTCAT 22191 30 100.0 37 .............................. CGAATATGGCCGAAATCTCCGCAGCACTTATTCCTGT 22124 30 100.0 39 .............................. AGGATATCCAACTAAACTTGTCGCAAGCGTTTTTGCCAA 22055 30 100.0 38 .............................. TACTCGCCGACCTTCCGCCCGATCGCGGCCCATTTAGC 21987 30 100.0 38 .............................. TCTCCATTTGCTTTCTTAGCCTGCTTCACGAGCTGATT 21919 30 96.7 35 .........A.................... AGGTTCTTTCAAAAGAACGGTGATGGGTAAGCTTT 21854 30 86.7 0 ....A............CT......T.... | ========== ====== ====== ====== ============================== ======================================= ================== 13 30 97.7 37 GTTTTGAACGTACCTATGAGGAATTGAAAC # Left flank : GAATCCGCAGCATGCCTACACGAAGTCGCTGCTGGCCGCGATCCCGGTTCCCGATCCGAAGGTGGAATCGCGGAAGTCGTTCACCGCTTATGAGGAATCCTCGAAGGCGGACTCGTACGGCTTGGAGCGCTCACGCTTCGTTGAAGTGAAGAAGGGGCATTGGGTGGCGGTTGCTGAAGGGTAGGGGAGTTAGGAATTAGGAGCCGTTCCGTTCGCTATGTTCAGCTGCGGGAAGAGATTGAGGGCGAGGATATTAAAGAGGTAAAATTGGCTTAAGCCATAGGAATAAACCAAAGCGTCAGAGTTTAATTCCGTTGGAAAAAAACGGGCAACGTTGTATAATGTAACTGCGCATTTGTGTCGTCGACCTCCAATGCTGCAAAAAAGCCGGGGGATCGACGACAACGAGGGCCGCGCGGGAACAGAGGTTTTGGTAACTGGCGTAAGGGAGAAGTGTTTGTTGGATATGTGGGAATAGCGTAACGACGGCGTTTTTACGG # Right flank : TCGAAAGCTCCTTTACGTCCTATCTTGAAACATCCTTCGGCGACTGCGGACGTCATAGTCGAAGTTGTTCCAGTTAGGCATATTTTCGGATTCCCAACATCTAGAGCTTCGAAAAAGAGGATATGGGTTCGAAGAAAGAAAAGTCTTTACGGGTTGACACCTGTATCCGGAGCAACATGATTGGTGATAAACCTGCATCAAAGAGCATCCTCTTCCTTGGAAAAAAATGCTCCCTTGAAACTAATGGTTTCATTATGACCCCAATGGAAGCTGTTTTGCGGCCTTTGCATATATCCGTGTCGATTCTTACAATCTGAATAGATTAAGTATGAAGCGCCCGGGCCATCGCATCCATATAGCTTTGAACGGCGCGCTGACTCACTTCCGCTTCTGGAACGAATTTTTCAAAAAGGTGAAAGCATCCGGGATACAGGTGAAATTCGACATTTACACCTGCTTGTGCAAGCCGCGTTACATATTCGATCGTCTCATCTCGGAAC # Questionable array : NO Score: 9.11 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.96, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGAACGTACCTATGAGGAATTGAAAC # Alternate repeat : GTTTGGAACGTACCTATGAGGAATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 45-464 **** Predicted by CRISPRDetect 2.4 *** >NZ_BILX01000080.1 Paenibacillus ehimensis NBRC 15659 PEH01S_CON0080, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 45 30 100.0 35 .............................. AAATTCCGTGCATCAAGATCGGTATGGCTCTCGTC 110 30 96.7 36 ......................G....... CTCTCATTTTGATACAGATCGATAGTGTCGTATGGC 176 30 100.0 37 .............................. CAGGGCGTTAGGCAAGAAGGCGGACTCGATATGAGTA 243 30 100.0 38 .............................. TCTGAAATAGCTCCGTCTTTGAAACATCAATTGTAGAA 311 30 100.0 37 .............................. ATCAAACATACCGCCTTGATGACTCCCGACTTCGAGA 378 30 86.7 28 .........A.....ACG............ ATATTGGCGATTTGTTAGAGTATCAACA Deletion [436] 436 29 76.7 0 C....-.........A.G....A..C.G.. | ========== ====== ====== ====== ============================== ====================================== ================== 7 30 94.3 35 GTTTTGAACGTACCTTTAAGGATTTGAAAC # Left flank : TTTGAAACTTTTGTGGTCAAGTCAAAAACCTTGACACCATCCAAG # Right flank : CCATTGTACAACCGTAACATGCATCGATAAAACAAAAAAAGCACCGCGAATACCAAGGCAGCTACCCCTTCGTTTCGCAGTGCTTCATAATTGTTTATTTGGACGATAGAATGCTACTCAAGTGGAGTAAAACCGATTCAGGAACGAACCAACAACTCTACAAAAATCTTCGTTCCATCCTGCTTATACGGAAGCTTTAATAGTCCTGCAGACGTTAACCCCTAACGTAAGTAAGCGGAATTAATATAGAAGAATTCAAACTTGCTGTCGCTGAAATTGGCGAACGAAGCCTTCAATTTGTCGTTCGTATGGGCGCTGTACTGCATCGTCACCGTATCGTTAGCGACGACAAACATCACATGGGAGTAATCCAAGGCGCTGATAAATCCGCCGGCCGGCGTGGTAGCTTTCTTGGTTTTGTAGAAATATTTTTTGGTACGCACCATGTAATCTTCCAAGCCGTTGCTCACATTGCGGCCTGTGTTCACCCAAGCCATCGA # Questionable array : NO Score: 2.97 # Score Detail : 1:0, 2:0, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGAACGTACCTTTAAGGATTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //