Array 1 16706-17779 **** Predicted by CRISPRDetect 2.4 *** >NZ_VZDH01000054.1 Prevotella copri strain iT2515 NODE_39_length_20191_cov_177.337_ID_77, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 16706 30 100.0 35 .............................. TACAACCAGTAGCAGCATGCGCAAACGTCTGCTGA 16771 30 100.0 35 .............................. TACAACACCTGACCAGTCAGCATGATGCCAATTTC 16836 30 100.0 36 .............................. TACAACAGTTTGCTGCATGCCGAGTGAATCAAATTC 16902 30 100.0 35 .............................. TACAACTCATCTGCTACCGATAAGCGACGTGTTGG 16967 30 100.0 35 .............................. TACAACCCTTACAAGAAAAAGTAATCATTTTACAA 17032 30 100.0 35 .............................. TACAACGGAAGTGCAACGGCCGCTATTATTTCGTA 17097 30 100.0 35 .............................. TACAACGTTTTGCAACGCTTACAGGTGTTAGCGGT 17162 30 100.0 36 .............................. TACAACACCCCTCACAATATATAAATAAGGTAACGA 17228 30 100.0 36 .............................. TACAACAGGACGGCAGTTAAACAACTCAGGCGCAAG 17294 30 100.0 35 .............................. TACAACACCCATTTTTCACTGTGCGCTACACGGAA 17359 30 100.0 36 .............................. TACAACTTTTTCCTGCCTCGTTAGTCCATCCTCAAC 17425 30 100.0 35 .............................. TACAACCGACAACGAAAAGTTTAGATTAAGAAGAA 17490 30 100.0 35 .............................. TACAACGTCATATTTGCAAAGTTAAGATAATACAG 17555 30 100.0 35 .............................. TACAACAGTACATGAAATAGGCAACAACATGCCAG 17620 30 100.0 35 .............................. TACAACACTTATTCAAAGACCACTCATTTTGTTGG 17685 30 100.0 35 .............................. TACAACGCAAAGTTCCAAAAGTAACACCATCTTCT 17750 30 96.7 0 ..........................T... | ========== ====== ====== ====== ============================== ==================================== ================== 17 30 99.8 35 GTTGTGGTTTGATGTAGGAATCAAAAGATA # Left flank : ATATTATTCTGGAGAAATAAAAAAACTTTCCTTACCTATTATGACATGACTGAAGATAGACTAAATGCTTATCATATAATGTGGTTATTTGTGTTTTTCGATTTACCTGTTACTACGAAAAAAGAGATGAAGGCTGCTTCTCTTTTTCGTAAAAACTTGGAGAAAGATGGTTTCTCTATGATGCAATTTTCTGTCTATATCCGTCATTGTGCATCAAGGGAAAGTTTGGAAGTGCATGTAAAACGGGTAAAATCTTTGCTTCCGGAGGCTGGAAAAGTAAGTTTGTTAAGTGTAACAGATAAGCAATATGGAGATATCTATAACTTCTGGGGTAAGCCCAAAAGTATTAATAAGAGTAAAATATCGAAAAAAGTTATCAGCGAACCTATTCAATTGGAGTTTTTTTAGTACTTTTGCATTAGAAATTATATCCTACTCACCATTTCTTATTAGATAGAGTGTTTGTTATGCGCTGAAAATCAGTATGTTCAAATCTGTAG # Right flank : ATATTATATACACGAGAATGGCATAGGGGCTGGCGCAGTTTCTGAATATCTTGGAATATAGGCAAGAAAGAGTCTTGTTCTCCACGGACTTCAATCTTTTCAAAAGAAGAACGGAAAAGATAAAAGTATCTCTGTCAGTATATGATAGTGCGGTAAAATGTATTGAGGAAGTGGAATGTGGCAAAAGAACTCAGCAAAACTATTCTTCTGAACTAAGAAACACCATTTGCCCAATAGATAAGAAAAACAATGCTGATGTGACGATAAGGGCCAACACGCCGTAGATTGATTGGGGATTGTTGACACAGTATCCTATGCAGGCAACCCAAACAGCGAAGGACAAAAGGCTGTTGTCACCCAACGCTCATATTTCTTAGAGTGCTTCGGGGGAGTATCTTCGCCTACTACTTCAATGCTAACGATTTCTACCTTTATTTCATGTTCGGGCTTGTTCGATTCTTCGTTGTTGTTTGCTGCGTCTGATATGCTGTTGTTGTTCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATGTAGGAATCAAAAGATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTGTGGTTTGATGTAGGAATCAAAAGATA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.80,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //