Array 1 23543-23842 **** Predicted by CRISPRDetect 2.4 *** >NZ_VADR01000122.1 Campylobacter coli strain MON358 1012300122, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 23543 36 97.2 30 T................................... GAAAGGTTAAAGATGAAAGTAGAATTAATT 23609 36 100.0 30 .................................... ATAATATCGGTTTTAAACCTTAAAAATATA 23675 36 100.0 30 .................................... AAAATCATTATAGGTTTTTCGCTTGTATTG 23741 36 100.0 30 .................................... TTCAATGAAACCACAGGAAAATTAGAATAC 23807 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 99.4 30 GTTTTAGTCTCTTTTTAAATTTCTTTATGATAAAAT # Left flank : GAAGATTATTTTGCTAGGGTTGCTATAAACTGCGTAGCATTGTTTATTTTTATTTATGCTGCGGTAAACATTTCGATGACTATAGGATTTGCGCCTGTTGTTGGTATCCCGCTGCCTTTTTTTAGCTATGGAGGAAGTTCTTTTACGATTTTTATGATTTTCTTTGGAATTTTGCAGCATTTGATTACTTTTAGATATTTTTGGATAGATAGTAAAAATAAAATAAAATAATTTTAAGCAAAAATAAGATATAATTTTATCTTTAAAAATTAAGGCGGATTTATAGCTCAGTTGGTTAGAGCAACCGGCTCATAACCGGTTGGTCGCAGGTTCGAGTCCTGCTAAATCCACCATTACTTTAAATATCTAATCTTAAATATGCATTAAACTATTCAAACTTTAAATAATATTTAAATCATTTGCTGTCACCATAAGACAAAATAGAAATTAATATTTTTTAAGTAAAATCTTTTATATATAGTGCTTTAGTTGATGATGAT # Right flank : GATGGCATAGATTTTGA # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTCTCTTTTTAAATTTCTTTATGATAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: F [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //