Array 1 65190-67069 **** Predicted by CRISPRDetect 2.4 *** >NZ_VBUH01000007.1 Aliarcobacter thereius strain DSM 23385 NODE_7_length_142572_cov_49.476773, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 65190 36 100.0 30 .................................... TCTGTTCAAGATGCACTAAGATTAAAGAGT 65256 36 100.0 30 .................................... ACTTTTGGTTTTATAATGCTTTTCACCTTT 65322 36 100.0 30 .................................... TAGATGATGTGCGACAAGGTCAAGAGCTTA 65388 36 100.0 30 .................................... ATGAAGATGATGGAACAGAAAAAGAATACG 65454 36 100.0 30 .................................... ATACCTAGTTTATAACCCACCTAGAGACCA 65520 36 100.0 30 .................................... ATTATATAATTCAACTCCAATTCCCCATCT 65586 36 100.0 30 .................................... AGAGTTTTTAGAATTAGTTAGTACAGAAGA 65652 36 100.0 30 .................................... ATGACTCATATATCCATTTTTTACAAAACT 65718 36 100.0 30 .................................... AGAGCCTGTTCATAGTGGAGCAGATATTAA 65784 36 100.0 30 .................................... CATTGTCGAGAGGGGAACAACCCAGACTAA 65850 36 100.0 29 .................................... TTGGTTAAAAAAGGAATATTAGTAACTGT 65915 36 100.0 30 .................................... CAGGAGCAGTTGAAATAATTACTTCAAGAA 65981 36 100.0 29 .................................... TTGTTTATTTGTGAATTTCACGGCTAATT 66046 36 100.0 29 .................................... TTACTATATAGGCGAACCAATAAGACCGA 66111 36 100.0 30 .................................... TAGATGGAGAAATTATAAATCTTGAAAAAT 66177 36 100.0 29 .................................... TCATAGTTATATTGGAAACCCGACTCGCT 66242 36 100.0 30 .................................... ATAGACAATATCATCTTCGTACCTTGGATT 66308 36 100.0 30 .................................... ATTATAAAATTGAAGATGTAGAGCAAATAA 66374 36 100.0 30 .................................... AGAAACTAATCCTGAAAAATCAATCCATTT 66440 36 100.0 30 .................................... CTGTTTGTAGTTCTATTGTATCATCAATCT 66506 36 100.0 30 .................................... AGAGTTTTATCTTGATAATTCACTTATAGT 66572 36 100.0 30 .................................... TGGTTGCCATCTAACTATGGATATGCTGAA 66638 36 100.0 30 .................................... TTTATTCTTTAGCTCATATATTTCAAGTCA 66704 36 100.0 30 .................................... GTACGAGTGCAGTTATAACAGCTTATATAC 66770 36 100.0 30 .................................... ACTAAATGCAATGTATACAAGTGTAAAAAT 66836 36 100.0 30 .................................... TAGGATATGAGTCAAATACTAGAATTATCA 66902 36 100.0 29 .................................... GCTTCAATTTATTCAAATATTAAAAATTT 66967 36 100.0 30 .................................... TAAGATGGATAAATTAACGGCAAAATCAAT 67033 36 94.4 0 ...............................T...G | G [67064] ========== ====== ====== ====== ==================================== ============================== ================== 29 36 99.8 30 ATTATATCAAATGGGGATTTGAGAGTAGATTAAAAC # Left flank : TCAACGAGTTCAAATATCATATTGCATGAAACAAATAGTTGCAAACTATCAAAGTATATGTTTGGGTAAAGTTGAAGATTTAAAGCTTTTTAGATTATGAAAAAGCAAAAAAAAGAAGAGATAAGTAGGTATAGAAAAATGGTACTCTTTGCAATGTTTGATATGCCAACAGATACAAAAGGTGATATTAAAAAATATACAAAATTTAGAAAAAAACTTCTAGAGATGGGGTTTATAATGTTTCAATTCTCTATTTATGTGAGATTTTGTAACAGTTTAGAAACAGCACAAAAATATGAGAGAAAAATCAAAGAAATTGCACCAACAAAAGGTTCAATAAGAGTATTAAAAGTAACAGAAGCACAATATAAAAATATGATTATTATAGAAAATTATCGCAAAAAACCTGAAAAAAAAGTAGAAAAACAGACTCAAACAGTGCTTATTTTTTAGTGTAAAAACTTTATAAAACCCTGTATTACAGGGTTTTTGCCTACTCT # Right flank : GAAGCTTTAGTTTCCTAAAGCCTCTTTAATAGCAAAAATTTCATTCATTGTTTTATAAAGTTGATCAATATGAAGCATATTTGGACCATCACTTTTTGCAACTTTTGGGTCAATATGCGTTTCAAAGAAAAATCCATCAACTCCAACACTAGCAGCCGCTCTTGCCATATATGGTACAAAAGAGCTATTTCCCCCAGTTGTTCCACCAGTGCTTGGAATTTGAACACTATGTGTTGCATCAAAAATCACAGGAGCATATTGTTTAAGAAGTAGTAAGTTTCTCATATCTACAACCAAAGCACCATATCCAAAAGTATTTCCTCTTTCACAAAGCCAAACACCAGCTTCTTTACTGCTTTCATAACTTACTTCATTTACTCCTCTTGTGTTTAATACTTTTTCAACAGGATGTTTCATAGCATCAGCTGCTAAAAATTGACCTTTTTTTATATTTATTTTTGCAGGAGTTTTAGCAGCAGCTACAAGTAAATCGGTTTGTC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATATCAAATGGGGATTTGAGAGTAGATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.60,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 95951-98350 **** Predicted by CRISPRDetect 2.4 *** >NZ_VBUH01000007.1 Aliarcobacter thereius strain DSM 23385 NODE_7_length_142572_cov_49.476773, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================================================================================= ================== 95951 37 100.0 40 ..................................... TTTAAATAAACAGATTTTAACATTAACAGGGATATAGGAA 96028 37 100.0 37 ..................................... ATCTATGCTATTATAACTAGCAAAGTTGCTTCTATCA 96102 37 100.0 39 ..................................... AATATTCTGTTCCCAAAAAAGCCCCAACTATTACAGGTA 96178 37 100.0 41 ..................................... GTTGGATTTTATTTAAAATATTAGGGTTGCACAAAGTACAA 96256 37 100.0 103 ..................................... TTGAATCTTCATGATTCAACTCTTTGAGTTTAATGCCTGGCACTAAAATCACCCACTTTCATTAAGACTTGAATCTTCATGATTCAACTCTTTGAGACATAGG 96396 37 100.0 36 ..................................... CTACATATAGGCTAAAAAACTTTTCGTTTGTATGTC 96469 37 100.0 38 ..................................... TTTTTCCATGAATAAAATGGAAAACCATAACTGCTTTC 96544 37 100.0 33 ..................................... TCTCTTTTTAGAGACCCTAAATTTTCTAAACCA 96614 37 100.0 39 ..................................... TTTGAACACAGCCTGCAAACCGTTTGCTAGGTTTGCTCC 96690 37 100.0 36 ..................................... AAAAGGAACAACCACAGAACAGTGGTTTCCTTTTAA 96763 37 100.0 36 ..................................... ATGTCCCTTCGCTCTCAGGAGCTAATTTCCAATCAA 96836 37 100.0 41 ..................................... ATTTCCCTCCACAATCTCAGAAGATATAGGGAAGCCAGAAA 96914 37 100.0 36 ..................................... ACATCTGTTCCATAAAAGAAGTTTGCTTCTTTTACG 96987 37 100.0 34 ..................................... AAGATATAAATCCTCTTTTATTTCTTTTAGTTCT 97058 37 100.0 35 ..................................... TTCATCCAGCAGTTTTAAAAGAAGATATAAATCTT 97130 37 100.0 34 ..................................... AAGAGAATAAATCCTCATCTTTAACACTTTTTGA 97201 37 100.0 35 ..................................... AACTATGAAAAAGATAATGCGTAAGCTATTTGCTT 97273 37 100.0 33 ..................................... TACTTTTATAGAATTTATCCTATGTTTTTGTGG 97343 37 100.0 35 ..................................... GAAGAATCCTTTTTGATATGCAAGTTGTTGCATAC 97415 37 100.0 39 ..................................... TTTGTATCAGGGGCAATGCAATCTGTTCTTCCCAATTCT 97491 37 100.0 35 ..................................... ATGCTTAAATTAATTTTAGCTATTTGCTCTAATAC 97563 37 100.0 38 ..................................... GTTCTGAACTTTGCCTCAAAAGTTTTTCTATCAAACTT 97638 37 100.0 40 ..................................... TTTGCTCGTAAGCATCCTCGTTAATTATATTTGAGAAAAA 97715 37 100.0 37 ..................................... TCAAATTTTTCTTCAAGCCTTATTGTCTCTTCTCTAG 97789 37 100.0 43 ..................................... AATGTATCAAAAAAATTTTTTGATGTCGAAGATGCGTTAATAA 97869 37 100.0 39 ..................................... TTCGTAGATTTCTACGACATACTGAGTATCATTTAGAAG 97945 37 100.0 37 ..................................... GATAATAACCAAATTATATCTAACATTTCACAAACTG 98019 37 100.0 39 ..................................... TTTAACTTTGGCTTGAAGCCAAATATCTCTTCCAACCAC 98095 37 100.0 36 ..................................... TTGAAGCCAAATGTCGTTACCAACTATCATAAAGTT 98168 37 100.0 36 ..................................... CATCCTCGTTGTTAGCATATGAGCCAAAGTTTATAT 98241 37 100.0 36 ..................................... CTATTTCAAAAAGCTTATTATAGATTGTGTCTATAA 98314 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================================================================================= ================== 32 37 100.0 39 ATTCAATAACAATGACCCGATTTAAGGGGATTAAGAC # Left flank : TTTACGACTATATCATCTTTGTGAGAGTTGTATTCCAAAATCTTTTGAGCTTTGTAATAGGGAGGAAATTTTTGAAAAAAAAGAGTATTTTATATAAAAAATAGTTTGCGAACTTTTTTTGACTGATTTAAGGGCTTTTAAGCTAAACTTCAAGATAAAAAGTTCGCAAACCTATGTTTTATAAAAGTTAATATATAGGTTTGCGAGCTTTTAGTTTTGTTTAAGATTTAAAATGCCATTTTATGGTACTTCTGAAACTTAAATAAAGCTAAAAAATAGAAAATCTCTATTTTTGAGTTTTTTATCTTTTGGTTTGCGAACTTTTTTTATAAGAAAAAGTCCATAAAATCGAGTTTTTTAACAATTTATTGTCAAAACACTAGAGTTGCTTTTTTAAAAATGGTATATATTTGCGAACTTTTTTGATACATTATGAGTATATAGTAATTTTAAGTAAAGATTAAATACTATTTTAGCTGTGAAAAATGGATTTAATGGCT # Right flank : CGCTTTTCGCGAAATAATCTGCAACCTTTAAGACTATTCAATAACAATGACCCGATTATTTTTGCCTTTGGCAAATTCAGTCATCACTAAAAATTACGAAAAGCTAAAGCTTATTCTATTTTTAGGACTCAGAAGAGGGGATTTATAGAAATGGAATTTTTATCAATACTTGCTTTGCAATATTTCCTTCTAAGCTATTCTATCAATAAAGCAGGTGGTGAAATTAAAATAAAGATTTGACTAAAGTCTAATTTCGAAACTAAGAATTAATTTTTTTCTTGAGGTAAAATTATATAAAATAAATTTAACGACAGTTTCTGTCAAAAAGATATATTAGAATTCTTCCAAATTAAAAGGGAGAAAAAATGAAAAAATCAATTATCTTATCACTCGTTTTAATAGGAAGTTCAAATCTATTATTTGCAAGTAATAAAGTATATAGTACTAATTTAGAGTATCACTATAATTATGGTAATAAAAAATGTTTAAAAACAGATTTC # Questionable array : NO Score: 3.08 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.17, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCAATAACAATGACCCGATTTAAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA //