Array 1 17371-12235 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFIT01000005.1 Acinetobacter baumannii strain 4300STDY7045723, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 17370 30 96.7 30 ............................C. GACAAGCCTTTCCCCTGCCGCAAAGTTATT 17310 30 93.3 30 ............................CA ACGATAAAACCAAAGTGCCTTTTGACATTT 17250 30 96.7 30 ............................A. GTTCACCCCGATACGGGTAAGCCATATGAA 17190 30 96.7 30 ............................C. TGAGCTTGATGGGGGTAATAGATTTGATGA 17130 30 96.7 30 ............................A. CATGTCGAATCATCGTGATATCTACAACCT 17070 30 93.3 30 ............................AC CTGAACAGGTGATCGCTTTGTTATCTGCCA 17010 30 93.3 30 ............................AA TATATCCCTTAAAAATAATTCTATTTAGCC 16950 30 93.3 30 ............................AG TGACTTCAATATAAAAATGCTCGTTTACAA 16890 30 100.0 30 .............................. TAAAAGTCAAAGCAAACTCTTGAAAAAGTT 16830 30 93.3 30 ............................GA GTTCATGAACTTTGTAGACTGTGTAATTAA 16770 30 96.7 30 ............................C. AAAGAATGCTCAAAACATTTTTGGGCGCAT 16710 30 96.7 30 .............................G CTTGTACCCAAGAAAGTACAGGGAGCTTAT 16650 30 93.3 30 ............................AG TCTCGGCGTGTCAATATTATGCAGATTTTA 16590 30 96.7 30 .............................G AAAAGCGTAATGCCGAATTGCAGGCTAAAA 16530 30 96.7 30 ............................A. TACGTACATGTAAACAAAACCCAGATGGTA 16470 30 100.0 30 .............................. CTTGCCAAGTTGAAAAAGGCTAAGGCTAAA 16410 30 93.3 30 ............................CA TGACCCTAAAGCTTTAGCTATGCACAGAGC 16350 30 96.7 30 .............................G AAAGACGGTGAAGCGTTTGCAGGGGGTGGC 16290 30 100.0 30 .............................. CTAAAAATTCAGGCTCATTACTAACGCCCT 16230 30 96.7 30 ............................A. CTGCATTCTGAAGTGGAGTTTCTTCTAAAT 16170 30 96.7 30 ............................G. GAGTGTCGGTAGGAATTTCAATCCACCATC 16110 30 100.0 30 .............................. GCCGCAATATCTCAGAAAAGCAAGATCAGT 16050 30 93.3 30 ............................AA ACTGCATAGATGACCATTAGAGACATCCCC 15990 30 96.7 30 ............................G. AGTGGGGACATTGTGTACGCTCATGATGTT 15930 30 96.7 30 .............................C ATGCCAGTTGCAAAGTCCAAGCCCACTGCT 15870 30 96.7 30 .............................A CTAACTGTAAAACAGAAGACTTGCCAACTT 15810 30 93.3 30 ............................GG TTTAAGTCCCCGAACATTACATAAGTAAAT 15750 30 93.3 30 ............................AA TGGCATTTGCTGCTGACGGGGATTTCGACT 15690 30 93.3 30 ............................AA ATCAAAATCGTGGCAGATAACAAAGCGATC 15630 30 96.7 31 .............................A ATCTCGGTATTTACGCCAAGGGCGCTATTCA 15569 30 96.7 30 ............................A. GATCTACCCTTTGAGCTAGATAAAACTTTT 15509 30 100.0 30 .............................. CACGTGGTACGCGCTGTAAGCCTGTTTGTT 15449 30 96.7 30 .............................G AGTATCGCAAATCAAACATTGCCAAGCTTT 15389 30 100.0 30 .............................. AGATAAAGCAGGGGATAAAGGGACGTTAGC 15329 30 96.7 30 .............................G TAATACTAGAATCTGTATATGCCAGCTCTT 15269 30 93.3 30 ............................CA TTTTGCGACGCGCTGCATCGTTTAGGGATA 15209 30 96.7 30 .............................G ATTGCGGACATTTAGTCTGCTGTATTTCTT 15149 30 96.7 30 ............................A. CGTGATCAAACCACATGCCTTCATCTTCAT 15089 30 93.3 30 ............................AC TTTAAGCGCAAACGAACAGCATCAAGATCA 15029 30 96.7 30 .............................G TTTCATCTGTCTTGATAGCTTCCCCCATAA 14969 30 93.3 30 ............................CA CTACGGACATAATCGAACATTTCCTGAAGT 14909 30 100.0 30 .............................. GTGCGAGTGTCTACGAGCCAAGCCGAAATA 14849 30 93.3 30 ............................AG TTGCTACTGAATTAGTTGTTATTGCTAAAA 14789 30 100.0 30 .............................. AGGCTGTGCTAGGTATTCGTCTGGTTCCAT 14729 30 96.7 30 ............................A. TAATATAGCTTCTTCCAACTACAATATATT 14669 30 96.7 30 .............................A TTTGCTACGCCACCAGCCATACCTAGAAGC 14609 30 93.3 30 ............................AA TAGAATTAAAACCACGTTGATAATATAGGT 14549 30 93.3 30 ............................AA CGTCAATTCAAACGTAAAAAGCTACTGAAG 14489 30 96.7 30 ............................G. CAGTATTACTCCACACTTTTTATATTTCAC 14429 30 96.7 30 .............................G TACCTCATCAATAAAAATAACTGATGTTTC 14369 30 96.7 30 ............................A. AAAATCAACCCGTATTAATACCGAATGCAC 14309 30 96.7 30 .............................A ATAAAGAGGTTTTTAACTGGTATGAATCGA 14249 30 96.7 30 ............................C. CATGACGATGCTTTTCTAACAAAGTCATCC 14189 30 96.7 30 .............................G AAAAACGTAACGCTGAATTGCAGGCTAAAA 14129 30 93.3 30 ............................CA GCTAATAAATTTACAAGAATCTGATGTGTA 14069 30 93.3 30 ............................AA CTGAAGTGAAAATTGTTCATTAATGGTTAT 14009 30 96.7 30 .............................C ATAGTTAATATAAATTTATTATGACAAAAA 13949 30 100.0 30 .............................. AGCCGTTTGGACTTTACCAATCTATATTTA 13889 30 93.3 30 ............................AG CAATATCAATTACAGGAATACCACCAGCAT 13829 30 93.3 30 ............................AA TAGAATTAAAACCACGTTGATAATATAGGT 13769 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 13709 30 96.7 30 .............................G ATGCGGGTTGTCCACCAGTTATGACTACTT 13649 30 93.3 30 ............................CC AAGCTGTGAATGTTGGTAATGCTTTAAGCG 13589 30 93.3 30 ............................CG TCAAAACAATCAAAAAAGCAATGAGTACAA 13529 30 93.3 30 ............................AG TGAATGGGATTTATTCGCAAGGTGATATTA 13469 30 93.3 31 ............................AA AAAGTTTTTTTGACAATCAAGCCGGCAAGTT 13408 30 96.7 31 .............................G CATCGAAGTCATAGAACGCTTTGAGTTTCCA 13347 30 93.3 31 ............................AG CGACTTTGAATTGATGCCATCTCCGCCTTTA 13286 30 96.7 30 .............................A TTCAGATTGGCTGCGGCCTCACCTGTAGCA 13226 30 93.3 30 ............................GC AAGTGTCACCTTTAAGTGCACGGAAGAAAT 13166 30 96.7 30 .............................C CATTCTCGCTAAGTGGCATCACACGCGATG 13106 30 100.0 30 .............................. GGTTGTTTAGTAAGTTCAAAGCCCGTTGTA 13046 30 93.3 30 ............................CA ATGGATTTAAAGATTTCAACCGCTTGGGAG 12986 30 96.7 30 ............................A. CATCGAAATTTAGTTCTAATTCTTTAATTT 12926 30 96.7 30 .............................C ACTTCTCTTAATTAGTGCTGAAGAATCAAA 12866 30 96.7 31 ............................C. GAATAAGTGAGATGTCTCTATGAGTTCAATT 12805 30 96.7 30 ............................A. TGAATTAATACGGCTTACTGCAATTGGTTG 12745 30 93.3 30 ............................AG TCTTTAATGTCGGCAACATGCTGTGCAAAA 12685 30 96.7 31 ............................G. AAAAAAGAACATTTCCAGCAAAAATTGACGA 12624 30 100.0 30 .............................. GCTGCCTGCAAACTTGTTTGGGGCTTTATG 12564 30 93.3 30 ............................AC TGGAATTCAGCAGTAAATAAGGGGTTAAGA 12504 30 100.0 30 .............................. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 12444 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 12384 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 12324 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 12264 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 86 30 95.4 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAACC # Questionable array : NO Score: 5.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.16, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //