Array 1 33-2090 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCUL01000019.1 Moraxella atlantae NBRC 14588, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 33 36 100.0 33 .................................... GCATGCAACATCACCGCCTCGCGGGAAGTGGTG 102 36 100.0 33 .................................... TGGTTCGGTTTGGTGAAGATGACCGTCGTTGCA 171 36 100.0 35 .................................... TAATACAGCCTTATTTGACACATACACAGGAATAC 242 36 100.0 33 .................................... CCCTTGCGTTTTCTAGGTGATGATAAAGTGGTT 311 36 100.0 34 .................................... ACAGTTGCTTTTTAACTCCAATGAAAAGAGTACG 381 36 100.0 34 .................................... TTGTTCTTTTAGATTAAAGTCTTCACTTAGGTAG 451 36 100.0 33 .................................... TACATCGCTGAACGAGGACCTGAATTGGCGCGA 520 36 100.0 33 .................................... AATCCGCCAGTCACAGATGTAGAAGCTACACCT 589 36 100.0 35 .................................... ATACTACTAATACTAATTATCATACTCCTTTTAAA 660 36 100.0 35 .................................... TCACAGCTTACCTCTGTGACCAAACGACCAGCAAA 731 36 100.0 34 .................................... ACAGACAAAGAGACCCCTTTGCTAGTCACGTTAG 801 36 100.0 36 .................................... ACATAGATTTTGCGTTCTGCCTCATCGGCATTGGCA 873 36 100.0 34 .................................... ACTACTAATTTCATTTAGTAATCTCTTCATCAGT 943 36 100.0 33 .................................... CAACCGCAATCGCGGCTACCACGTCGCGCGTGC 1012 36 100.0 34 .................................... CTAGTTGTACCGTTTCTAGTACATGTCAAAAATT 1082 36 100.0 33 .................................... GAACAGGTGTTCTGGCTGAGCTACCAAAACTTC 1151 36 100.0 33 .................................... GACCATTGGTCAGGTACTGATAAGGAGGTTGTG 1220 36 100.0 34 .................................... ATAAAAACGACGATATCGCCGCGTAGGTGCTTAA 1290 36 100.0 35 .................................... TATCGCATTCCAAGCGCGTGAATAGGCGCCCCACA 1361 36 100.0 33 .................................... CTGATTTTACGCATAGCGTATCCCCTTTTGTTG 1430 36 100.0 35 .................................... GCAATAGTGTTATAGTCCGTTAACCACCCGTCTAT 1501 36 100.0 34 .................................... AGCTGGGCTTAGGACACCATACAAGCCTTTAGCC 1571 36 100.0 35 .................................... GCGACATGATTTTGATAACCACGCGCGTTTTCTAA 1642 36 100.0 33 .................................... AGAGATAGTCCGAGCAACTATCCACGAAATAGG 1711 36 100.0 34 .................................... CGCACTTTAGCGGCTTTCACCGCCTCGGCCTTGG 1781 36 100.0 31 .................................... GTCAGCAGTCGCGTGGCTAATTACCGTATAC 1848 36 100.0 31 .................................... GTCAGCAGTCGCGTGGCTAATTACCGTATAC 1915 36 100.0 33 .................................... ATTTCTTTCGCTAAGCTTTCGCGCGCGTCGTCG 1984 36 100.0 35 .................................... CCATTGATATCTCTCACAAAGTGAACTTCATTGTA 2055 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ==================================== ================== 30 36 100.0 34 GTTCAAAGCCTTCCCCGATTCCTAGGGGATTAAGAC # Left flank : TAACTGTTGATGATAGTTTAAAACTTTTGTATG # Right flank : CTGATTTTGCAAAGTACGCAAATCCCGCTCGCAAGACGAGAGCTATGCTCGAAGTGAAAAACATGGCTATAATTGAAATTATTATTTAGGAAAGATAACCTATGAATGAAATAAATATATATACGACAGGCACATACAGTACTGCTACCCAAAAAGGCGGTTGGGGTGTTCTCATACAGCAAAAGCTAGCAGATAAGCAAGAACATAAGATTCAGACAATTTTAGGTAGCGATACGCACACCACAAACAATCTAATGAAACTACAGGCACTTATAGAAAGTTTGAAAGCATTAAATTTTAACGAATTATCAAAATATAAATTTTTTCTAGATTCCCACTATTTAATGTTGTCATTGAGAAATCGTGAAAAATATGAAAATACGAATTTTTCAAAGGTTCAAAATGCTGAAAAATTACAAGAACTTTATCGGGTATTAGACTCTAAAGATTTAAAACTCAATAATGATGAGAGTTTAACAATAAAAAACTTTTTGGTATTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAAGCCTTCCCCGATTCCTAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.40,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [41.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 1 204830-205278 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCUL01000002.1 Moraxella atlantae NBRC 14588, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 204830 29 100.0 31 ............................. GTTGCATATGCCATACACTCAGATTTTGGTA 204890 29 100.0 31 ............................. GGTCTATCATGCCATCGCACCCACGCGCACG 204950 29 96.6 31 ............................T ACTAATATGGGATAAGGGCAATGTTACACCC 205010 29 100.0 31 ............................. ATCTCACCAATGATAAAGGCGGCTAACATCG 205070 29 96.6 31 ............................T TTTGCTGTGGTGGTCTTGAGTTTGTCGCGCA 205130 29 100.0 31 ............................. CCGCCAAAATGAACATAACGCAGACATTATG 205190 29 100.0 31 ............................. TTTGAGTAGCTAAATAACGTTCTATACCATA 205250 29 82.8 0 A..C......A.G...............T | ========== ====== ====== ====== ============================= =============================== ================== 8 29 97.0 31 CTTTACCGCCGCATAGGCGGCTTAGAAAA # Left flank : GCTGGTCGATTATGTGCATTTGTCGTCCATCAAAGAAGTGGGTGATAAAGCGACTGGCAATGTCGTGGTCAGACGTTATCGTTATAAGGATTTTGACAAAAAAGTGACAGCATTTGCCCAATTTAAAGGTATTAGCCAAAAAGCGGCGTTAGCGCATTGCCGAACGCATAAACGCCCTATCAAACGCTATCCGTTTATTACCTTAAAAAGTGAAACCAATCACTCTGATTTTAAATTATCGATTTGGCAGGAGGCAACTCAACACCCCAAAACAGGGGGATTTAATACGTATGGAATCAATAATCAGTCCAATAACGTGACTGTTCCGCATTGGTAATCAACAAAGCAAGCAAAAATAAGGGTGAATAACCCTTATTTTTTACTCTATAAAAAAATGTTTAAATTTCAATAATTTATGGCAGGGTGGAATCGGTAGGGTAAAAAAGGGTTTTTTACTTGGTAAGCCTTGTTATGACTGGCTTTTTTGCGTTATAATTCTA # Right flank : TAGTACCTTATTGCTGGCTTTAAGTGCTTTATTTAAGTGGTTGCTAGGTTTTTACCATTGGCATTGAATATCACAACCGCACGATCAAACATCGAGTAAGGCAAGCAATTAGGCAAAATTGTAACTTCTCCAAAAACTGGAAAATCACTTTACAGTCTTTGCGTTAGCATTTTTTTACATTGATAACGGCTGTGTTTGATGTCGGCATGGTTTTAAAAGCACCACAAAAAAGACGGCTCGTTGCCTAACCGTTTTTTAAAAAAAATTATTCGTATCACCAAAGCTATTTAGCGCGGCTTATTGCGGCGTAGATGGTTACTGCGTCGCGCTTTGAGCGGTTTTTGCTGCTGGCGTTCTTGCCGACGTTTGGCAATGCCATACAACCCTGTGCCTTGACGTGGGCGCAGACCGACTAAGTTTGCCAAGCGGTCAATCTCGCTGCGGTCAAGCTCTAGATATCGCCCTGTGCGCAGCTCGCGCGGTAGGCTAACGGTACCATA # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTACCGCCGCATAGGCGGCTTAGAAAA # Alternate repeat : CTTTACCGCCGCATAGGCGGCTTAGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACCGCCGCATAGGCGGCTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 209-34 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCUL01000003.1 Moraxella atlantae NBRC 14588, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 208 36 100.0 34 .................................... AGATCGCCGTAAATACACAATTCTGACAATAGTA 138 36 100.0 33 .................................... GCAAGCAGCTTGACGCGCTTAAAGCTGCCCCTG 69 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================== ================== 3 36 100.0 34 GTTCAAAGCCTTCCCCGATTCCTAGGGGATTAAGAC # Left flank : CCATTTACGGCTTTGTTTTTTATTTGGTGGATAGTGGTGTTAGTTAATAACGTAAGTGTTGGAAAATAGCGAGGTTTTTGCTATAATAGGACTCGCTAGTTTTTATCTGAAACGACAACTGACCTACAAATGCGAGAACGCAGGTTGCCGTTTTGAAATCGTGAATGAGAGATACACGACCCAGCGATGTTCGTGTTGCGGTGAAATCACCGCCAATAGTCCGAAAGGTAGAAAATCGCTTGGAATAAGAGAATGGATATGTGCTTCGTGTGGCACATGGCATGATAGAGATATCAATGCCAGTAAAAACATTCTTGCGGTCGGGCTTGACCGTCTTGTAGAAGGAATCCCCTTGCTTTAGCAAGGGGAGGAAGTCAAATTTGCCTTGAACTGTATAAAAACAAAAATTGGTCAAAAAATCACCAACTTTTTAGTTGAATTTTGTCTACTAAAATTTGTTTTTAACTGGTTGTTTTTATTGATAAATAAAAATAAGTGCA # Right flank : CGCTAGGGTTCGGCTAATCGTTGTCGCAGTCCAA # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAAGCCTTCCCCGATTCCTAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.50,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [25.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 1 1118-35 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCUL01000069.1 Moraxella atlantae NBRC 14588, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 1117 36 100.0 34 .................................... CGACCTACGTCAGCCTGGTTAGCGTGGGTGAACA 1047 36 100.0 33 .................................... CCACCAGTTCCAAGCTCTGTGCAGGCTCTGTAA 978 36 100.0 34 .................................... ACAGTCGTTTAGCTTATATTGCCCGCCCTCTGCT 908 36 100.0 36 .................................... CACCTTAACGTGCATGACGAGTGGGCAGGTATTTAT 836 36 100.0 33 .................................... TGTTTGTCTTGAAAGTGATTCGCCATTGCTATT 767 36 100.0 34 .................................... GGTAGGCCGTCAGAGTAATCAGTAAAGTCAAGCT 697 36 100.0 34 .................................... ATAGTCATCAATGCAATTAAAAACACATTATGAA 627 36 100.0 33 .................................... CAAGATTTTCAACATCCCCATACACTGTTTTAA 558 36 100.0 33 .................................... TAATCACCGCCGCGGTCATGGAATGTGATAGCG 489 36 100.0 34 .................................... GCCTCATTATCATCTTCAGTGTAAGAAATTTGAG 419 36 100.0 35 .................................... TATGCAGCAATATAATAGTTATCGCCGCGGTCTGT 348 36 100.0 33 .................................... ATCTGCGATACTTTCATCAAAGTAGCCGCAAAC 279 36 100.0 33 .................................... ATCTTTAAAACCGAGTATTTAACTCGCATCTTA 210 36 100.0 34 .................................... AGTTTAATTACTAACTCGTGGGTTGGTAATTTGC 140 36 100.0 34 .................................... TCTGGTACATCAATTTCATACATCACCTGCTGAT 70 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ==================================== ================== 16 36 100.0 34 GTTCAAAGCCTTCCCCGATTCCTAGGGGATTAAGAC # Left flank : CATATTTCTTCTCTTCAACGTGAACAAAATTTTG # Right flank : CTCAAGGCTACGGCCTTGGCACGAGCTTGGGCTTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAAGCCTTCCCCGATTCCTAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.50,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [23.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA //