Array 1 966699-967224 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065983.1 Aggregatibacter segnis strain FDAARGOS_987 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================== ================== 966699 32 90.6 38 ............G......GG........... ATATAAAAGAATGGCAATCAAATACCACCCAGAGTTTC 966769 32 90.6 39 ............G.....TG............ AGGTTTAAATCGTATTTTAGCGCCCATTAAACGCATTTC 966840 31 87.5 39 ............G......GG..-........ AAATGAACGAAATTAATATCAATATCCCATATTCGTTTC 966910 32 90.6 39 ...................GGT.......... TGCAAATGCTTGATAGCCGGCAAAGCGGTGATAAGTCTT 966981 32 87.5 40 .........C.........GGT.......... ACAATAATGGATAAGGTTTATTTAGCACTTTACAAGTCTT 967053 32 100.0 39 ................................ TGATTTCTGAAATCGAAGCGAAATTAAAGGAGAAGTCTT 967124 32 100.0 37 ................................ GGTGAACCTGCTAGACTCGAGAAGCTTGAGTAGTCTT 967193 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================== ================== 8 32 93.3 39 AATCCCTTTGGAACAGGGCAAGGTCTTTCGAC # Left flank : AATAAATTTATCCTGCCGTTGTTGCGCCAATTTATCGCATAAATTCAAAAGGTTAAGCAACTGACGGGAAAGTTGTACATCACCGCCATTGCCGGACACTTGCGGAAGTTTGGCAAGTTCGTTGTTGAGTTCGTTGCGCAACGCGGCAACATTCACACCGCTTGCGGTTAGAATCGGTGCCACCGAACCGTCTTGTTGATTTAACAAGGCACTCAATAAATGCACCGGTTCAATAAATTGATTATCCTTGCCAATCGCTAAAGATTGCGCTTCAGCAATGGCTTGTTGGAATTTGGTCGTAAATTTTTCAATATTCATAAGTATTTCCTTCTTCGTTCCATGGATGTTCTGTTGAACATTTGTTCGCCAAATTTAAATAAGATCGTTTTGAGGGATTTCAAGAGAAAAAATGAAAAAATTTAGTCTTGCCGATTAATTAGTAGAAACTTGATTGGCGTGATTTATTTAAAAAACACACCGCACTTTGGTGATTGATGGAG # Right flank : CTGCGGGGGTGGTTTAGTGCCTTGATGGATAAGGCTTGGGAGGATCGGTTCCCAATTTTTTCCCTCACGCGAAAAGTAGGGTATGAATTTGATTAAATGTTGAACGTTTTTACTCATTTTCTTTTTAATCTTTGTTCAAAGTGCGGTGATAAAAAACGACGTTTTTTATATGACTTTTGTTCGCTATTTTACCTCAGTTTCTCCACATTTTCACCTCTGTTATAACGTTAAACTGATGGGTAATGCTGTCCAAATAATGCCTTGGGGCAGGCTCGCTTTTCCTAAGCGCCATTGAGAGCACTTATGGGGTAAGGGGTAAATTCGGAGATCATCTTCTTTTTTATGGAAAATCTGCATAACCTCCGTTAAGCATTGTGTTAACAATTTTTCTGAACCTTCAAATAAGAAAATACTGTATTGAATTGGGGTGGCATATTTGGTCATGCGGCGATGAATACGCTGGAGACGTTTGGGGTCGGCAATGTCGTAACCAATAAGGT # Questionable array : NO Score: 2.61 # Score Detail : 1:0, 2:0, 3:0, 4:0.66, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATCCCTTTGGAACAGGGCAAGGTCTTTCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 2 972228-971692 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065983.1 Aggregatibacter segnis strain FDAARGOS_987 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 972227 37 100.0 34 ..................................... AAAGGATATTTGATGAATATAAGAGACTTGAATG 972156 37 100.0 32 ..................................... AGCGAATAAAATTCATCGCCATTATACTCGTG 972087 37 100.0 34 ..................................... CCAGACGGTTCTTGAAAAGCTTCACACGCAGGAT 972016 37 100.0 35 ..................................... ATTTGCCGCTCTTTTAAATTGACTTGCGTCTCGTG 971944 37 91.9 36 ......................T.........G...G TACAGCGCACCGTTTTTGTAAACACGGATGTCATAT 971871 37 91.9 33 ...........T.......C............G.... TCTGGGTGGTATTTGATTGCCATTCTTTTATAT 971801 37 94.6 36 ..........A.....................G.... TAAGCTACTTGTTCAGTAGTGATGTTTTAACACACA 971728 37 94.6 0 ...................C............G.... | ========== ====== ====== ====== ===================================== ==================================== ================== 8 37 96.6 34 GTCGAAAGACCCCGCCCTGTTCCAAAGGGATTAAAAC # Left flank : TAAGATAAACAAAGAAAGAGGAAACATGGAATTTATATTAGCTTTTTTAGATGAGTGGTATAAAACTCAATCCATGCGATAAACATGGCGGTATCGCAAGCCGGAAATTGCGAAAAGTACTATCAGCTCTTAATGTTATTTTACAAAAGAACTGTATGCAAACCCACCTCAAAAATACCTTATCACCTATAATATCACGCAACAAAAAATCCAATAACTCTTAGAAAAAGAAAGCCTACCCCAAAGCATTATCCAAACGGACCGATGAATGCACCCTATAAACAGAGATGAAAATGTGGAGAAAGTGAGGTAAAATGGCGCACAAAAATCACATAAAAAATATCGTTTTTTATCACCGCACTTATAACAAACATTAAAAAGAAAATGGATGAAATCGTTCAATATTTAATCAAACCCATACCTTACTTTTCGCATGAGGGGAAAAGTTGGGAAGCGATCCTCCCAAGCCTTATCCATCAAGGCACCAAACCACCCCCGCA # Right flank : TCATCATCTAAAATCAACCGCCCTTGTGGCGGTTTTCTTTTCTACAAACCAGCATTCCACTCCCATCTCTCCTTTATTCACCATGCTGTTTTCATCAAAACAATATGATGATGAAAACCAAAAGCCTTAAACATACAAACTTGCAAAACCCTCAACGTCCTTAAATTATTACTAAACTAATACCATTAAATTACACAGGAGAAACACCATGACAACATCTGAACATTTCTACGATTTCGTATTATTACCTCCCGCTCGTTTTTAATACGACCGTGAGCCGCAGCGGAAAATGCGCCGGTATATAGAGCCGAAAATCTATACATTCGTATAATTATGTTGAAAAGGAGAAAAATATGCTTGATGTCATTATTCGTATTGCTGAGGCTGTAATTGATGAACTCAAAAAAAACAAGTAGTCAAACTACCCGCTCACCGTGGCGGTTATCACGGTCATCTAGCAAATCTGATACAAATTTGCAAAATCAAAACAAACCAAAAAA # Questionable array : NO Score: 3.07 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAAGACCCCGCCCTGTTCCAAAGGGATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.50,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA //