Array 1 2750665-2749136 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACRQS010000001.1 Enterobacter hormaechei strain UCICRE-131 scaffold00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2750664 28 100.0 32 ............................ TTGTAAACGAACACCCACTTGTGGTGATTTCC 2750604 28 100.0 32 ............................ TGATTCGACTTGCTCTGCTCCGGGTGAATCCA 2750544 28 100.0 32 ............................ TGTTGGCATCGCGTTATCTACAATATTCGCTA 2750484 28 100.0 32 ............................ TCCGATAGTTACTGTATATACATACAGTATTA 2750424 28 100.0 33 ............................ AACTCGTTTGGAGTGATGCCCGGGTCGTACGTT 2750363 28 100.0 33 ............................ AGGTCATACACGTCAGCACACTGTTGCGAAAAC 2750302 28 100.0 32 ............................ AATGAGCAACATCGACAAACGCGCATTACGAG 2750242 28 100.0 32 ............................ AAGCATCCTTGCGATATCCTTTTGCTGAATTC 2750182 28 100.0 32 ............................ CCATGCGCCACATCTTCACGCCCGCTGTCATA 2750122 28 100.0 32 ............................ CCAATGTCACTTTAACGCCCCTGGCGGGTATA 2750062 28 100.0 32 ............................ AGATCGAGGAATGTCTCGTTTGCCGGTGCAAT 2750002 28 100.0 32 ............................ AGTTTATCCCGACCGGACTCACTGACGAGGCG 2749942 28 100.0 32 ............................ CTACCCAGAGTGCGACTATAAAAAACACTCTC 2749882 28 100.0 32 ............................ GGACGTGTCGCAGCTGGTGGCCGATGCGGTAG 2749822 28 100.0 32 ............................ ACCAACGATGATGGCACCATGGCGCGCGCGCC 2749762 28 100.0 32 ............................ GATTTATGCCCCGTCGATTTGCTCCCATGGCT 2749702 28 100.0 32 ............................ TGACAGCCAGGCTTCGCGCAGCACATACACCA 2749642 28 96.4 32 .....T...................... TACCGTGGCGGCCTCCTGCTGATCGAATCGAA 2749582 28 96.4 32 ............G............... TTTGGACTGTAGATTGCCCAGGACCATCGTGT 2749522 28 92.9 32 ..T.........G............... TACGCCATAGACGGTGCCAGGAATCCTCATCC 2749462 28 92.9 32 ..T.........G............... AGCGGGGTAGTGGTAGCGCCCCGCCGCTTCGT 2749402 28 96.4 32 ..T......................... GGCACAACACGCACAGGCCGCGGTCGCGTTGT 2749342 28 92.9 32 ..T.................T....... GGTGATGTGATGTTTGCCCTGGTCGATGTGAA 2749282 28 96.4 32 ....G....................... TTCCCGCATTATCTGAGGAAGGCTGACACCGC 2749222 28 96.4 32 ...............A............ TCATCGAGTGTAAGGCTGTGTGATTTTATTGT 2749162 27 67.9 0 ......CA...C...AC..A.AC.-... | ========== ====== ====== ====== ============================ ================================= ================== 26 28 97.3 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGCGCCACACGTTCGCTCTCGTCGGGCGTCAGCGTCCGGCCCGTACTTTTGCGGCGGGCAACGTTACGCTCGTTGATTCCCGTAACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTGAGATATTCAATCAGCCGCATGCCTCTGCTTGCGGGTAAACCGGCGTAGCGCCACAGCGTGTTATCAGCCGACCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCTGAGTGATGTCATTTGTCATGAGTAAGTATAGCCATTTGTCAGGAGGTATGGAACGGGTGTTTTTTTGTTCAGGGTGGGGTAAAAGAAGGATGGGAGTTGACCCTAATTTTTGACCAAAATGTAATGCATTGATTTTTAGATTAAAAAATCCGGGGTATAAAAAAAGGGTTTGAGCAGTGTTTTTAGCTTTTTTTGTATGAAAATCATGGCGGTGGAGAGATATTATTTCA # Right flank : CCCGAAACCAAACCCAACCAATCGTTCAAATAATCGACTGTACTAACAAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTCTCAGCGTATTGCCCAAGCGTCACGGTACAACCGAACGGAAAGCGCATTCGTAAAGGGGAGACGAC # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 2761423-2760191 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACRQS010000001.1 Enterobacter hormaechei strain UCICRE-131 scaffold00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2761422 28 100.0 32 ............................ ACCTTGAGCACAAAAGCCAACGGTGGGGCATA 2761362 28 100.0 32 ............................ CAGCTGGTGACGGTCTTTGCGTTTTCGGCCAG 2761302 28 100.0 32 ............................ ATTCAGGCTGCTATCGAAAAAGGTTTGCTTGA 2761242 28 100.0 33 ............................ TCCGTGCCGGTTTTTGATTTAAAGGACAGACAT 2761181 28 100.0 32 ............................ ATCAAAAAAGAGTTATTAAAACAAAGACGGAT 2761121 28 100.0 32 ............................ AAACAATATCGACCTGTCCTGGGGGATATCGA 2761061 28 100.0 32 ............................ GTTGTCGAATCGCAGACGCGTCGGCGTATCAG 2761001 28 100.0 33 ............................ GGTCTGGCAAACGGTCGGCGCTCACAAACGAAA 2760940 28 100.0 32 ............................ ACCAGCCAGGGCGCCGCCTGGATTCTCCCCGG 2760880 28 100.0 32 ............................ AAAACTCACGCGGGAATGTCTGCGTTTGTTGA 2760820 28 96.4 32 .....................G...... GTGGCCGCGTGCCGTTTGGTATGCGCCTTACT 2760760 28 100.0 32 ............................ TGCTCAAGCCCGAGAAGCCGATTAAGTGCTTC 2760700 28 100.0 32 ............................ GTGTTGCGGGGCTATCTGCACGCGCGTCCTGT 2760640 28 100.0 33 ............................ GAGCAGCCAGAGCCGGGAGCCTATCCGATCCCC 2760579 28 100.0 32 ............................ GGTATCCGTAATCCGACGGCGGCCATGCGCAT 2760519 28 100.0 32 ............................ GATGCAAATACTCCGGGTTAAACTTACTGACT 2760459 28 100.0 33 ............................ GTTTTATCTTCTGGTGGATTGGCGTTCGATGGC 2760398 28 100.0 32 ............................ TGTCGCGCTCTTTCTGCTTATGCTCACGCTCC 2760338 28 100.0 32 ............................ AGCTTGCCCATGTGTGTCTCAGGTCATGGAAT 2760278 28 100.0 32 ............................ TGACTGGCCGCCTGCTCCAGACGTCAGCCATC 2760218 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 21 28 99.8 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGTTGCCTCGGTGCTTATCTGGAAGAAGTCAAAACCGAACTCGCAGAATCAATGAGCGATTTCCGGGTGGTTGAATTTGACGACGAGGCGGAACGGCCGAAGGAAAAAGAGTGGCTTCTGGAGGATACCGAAACCAAATGCGATTACTGCCGGGCATTAAACCACGTGCTGCTGGTGTCGCATTTTGACCGCGAGATGCTGCCCCATCTGACAGGATTGCTGCATGACATTACACATTCGATGGCGGCAGATGTGGCTGCACCTGAATGTGGAAAGCCTGTAATTCATATCATTAATTAGGTTTAGTGTCGTGCGTCGGGGGAGGGGCTCCGGCGCGGTATGGCGAAACCCTTTTTTCGAGTGGTTCTTTAAGTTATTGATTTTTATTGTGCGAATAAAGGCAGCAGAAAAAAGGGTTTGAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGATTTCTTCCA # Right flank : TTGGCGCTCAATGTGAATGGCTGTTTCAAGAGGTTCACCACCGTACAGGCAGCACCCCCCAAAACATTCACTCCAACTATTTTAAAACCCACAATCCTCGTTGTATTTTAAATAAACTCAATACACATTCACCCCACAACCATATTTCCTCATATATATTATTCACAAAAATAATACATTAAATATGTCAGAGATTTTTTATCTCGACATTCCGATAATTATTATTCATTTGATACGCGTCACATTTGTCTTCATCTTATCTCCGCTAACATACCCCGCATTCAACATATTGAAGTAAAAAGCACTTGCTATGCCAGCGAACAGCATTACCCCATCCGACTTAAAAACCATTCTTCATTCAAAACGTGCCAATATCTATTACCTGGAAAAATGCCGTATTCAGGTAAATGGTGGACGCGTTGAATATGTTACTCAGGAAGGTAAAGAGTCATTTTACTGGAATATTCCCATCGCTAATACGACGGCAGTAATGTTGGGAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 2776906-2776578 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACRQS010000001.1 Enterobacter hormaechei strain UCICRE-131 scaffold00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2776905 28 96.4 32 ...........G................ TCCAAGAATGCGCCAGTGATACGCGTATGTTC 2776845 28 100.0 32 ............................ CGACGCTATCCGCGAGCAGTTGCACGCGATGC 2776785 28 100.0 32 ............................ ATTCAGCGCTGGCACGGATTCCCAGCAATTGC 2776725 28 100.0 32 ............................ CACTCGACGCCCATCTGGACGAATGAGTTAAT 2776665 28 96.4 32 ....................A....... TCTTGCCTGATTTGCTCATGCCTTTAGTTACG 2776605 28 75.0 0 ............A.......TAGGC.C. | ========== ====== ====== ====== ============================ ================================ ================== 6 28 94.6 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : CAGGAACCCGCACAGACGGCGAGTTCACCCGTAAGCTGCGCTTCGGCACCGGCGGCAAAGGCGGCGACCTCTTCATGGCGGGTGGGCATCCACTCAATGGTCTTCATCTTGTTAAGGCTATCGCTGAGTCCGTTCAGAGAGTCGCCGGTGACGCCCCAGATACGCTTTACGCCAGCCTGCTCAAGGGTTTTCGCTATGTATGCAGCCACGGTTTGTTTCATGGTTGTCCTTCTCCTTTTTGTGATATCGCTTACAAGCTTAGAAGAAAGTCGCTGTATTGCCTGCTCAGTACTCTTTAAGTACAGGTGGTTTTTCTGCGCGACGCGCCGCCAGCGGGATGAGGTTGGGGCGGGAGGAAGCGGGTTTGCAGACCCTTTTTTCCTGATGATGCATAAGTTATTGATTTTATATGGTTGGGCTGATGGGGAATAAAAAAGGGTCTGGAGGAAGTTTTTGAGGTATTGGTTTATCAGACAAAGGGATAGGTGTAGATTGTTTCA # Right flank : ATGTAGGCCGGGTAAACGTAGTGCCACCCGGCAAAAAGCCCGGTGGCGCGCCTACAGGGTTTCCAAAGGCAAATGCGCTGGGCTGCACGGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGGGTTCCAAAGGCATATGAGCTGGTGTGCATGGACAAAAAAGCCCGGTGGCGCTGATGCTTACCGGGCCTACAGGTGAACCACGACAGATTATGCGAGCACAAGATCGCCCTGTGGATGGCACGAACATGCCAGCACATAGCCCTCTGCAATTTCTGCGTCGGTCAGCGTCATGGTGCTGGTGACCGTGTACTCACCGGAAACCACTTTGGTCTTGCAACATCCGCACACCCCGGCGCGACAGGCCGCCGCCACCGGTACGTTGTTGCTTTCCAGCGCTTCAAGCAGCGTGGTGCCCACGCGCCCAAAGAAGGTCTGCGCCGGTTGCAGCTTCGTGAACTTCATCCCGCTGGTCGCCGCTTCCGCTACAG # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //