Array 1 16334-16050 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTHI01000121.1 Streptomyces sp. b94 scaffold121.1.size16611, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================== ================== 16333 30 93.3 30 .........................C...A ACGGCAGCGGCGGGTGTACGGCCACGTTCT 16273 30 100.0 31 .............................. CGGCGACGGTGCGCCCCTGGTGGTTGGTCAC 16212 30 93.3 42 ................T............G GGTTCGTCGTGCCGTAGTCGACCCCGACCCAGTGCCGGCGCA 16140 30 96.7 31 ............................T. CTCCGTGGCAACCTGACCCCACTCACGGCCT 16079 30 90.0 0 ...........T...A.........C.... | ========== ====== ====== ====== ============================== ========================================== ================== 5 30 94.7 34 GTGGTCCCCGCGCACGCGGGGGTGGTCCCT # Left flank : GCCAACCTCCGCAACCTCCTCAAGCCCGCCTAACCCCTGCCCCACGGCTCCCGGTTGGGCAGGACGGGCACACCGCATCCCCAGGACCAGCCCCACAGACAGAGAGCAGAACCGCAGCCCACCCGCCGAAGCCAGGCCCAGACAGGACCGGCGGCGGGCAGAATGAGCATCAGCCGAACCACACGTGACCACTTTGCGACGGAAGGCGAGATATGCCGGTTCCTCAAGAAGTAAGCAAAAACCGCATTCCCGCCACCTAAACCCCCAGTTCACGAAG # Right flank : GCGCCCCGAGCGAAGTGGCAGGTCACACCCCGCGCGGGTACTCCCCCTTCCCCGTCCCAATGATCCCGCCCGGGTCCCGCAACCACACCTGCTGACCCCGGTCGGTCACCGTCAACCCGAACTCCTCCGCACCAGGGCGGCCGGCCGACTCGTACTCCCACCAGGTCTGCTCGATCTCTTCCCACAGCAGCCCGATCCCGTACTGCCACACCTCCTCTCCCGAAGCCGTCGAAGCGCCACCGACCTCACTCGTCACCCACACACGCACCCCGCCACCGGCGACACTCTGGTGAATCATCCGCACACCGGGCAGTCGTGCCCCCGCGAACAACGCGAACCCGAGGTCCAGCAACCGGGCCGGGTCCAGACCAGCCGCCCGCGCACGCCCCCTCCCCCGTACCTCATGCAGATCGGGTGTGCGGTGCGAGCGCATCGGCATGTACGTGGCCCCGCCGCAGAACGGCCCGACCGCGCTGCCGTCCCCCTGAACCCGTAGCCGA # Questionable array : NO Score: 3.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 9753-10943 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTHI01000129.1 Streptomyces sp. b94 scaffold129.1.size15914, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================= ================== 9753 30 96.7 31 .............................C AGAAGCAGTTCACAGACCTGCCCGCCGCCCA 9814 30 96.7 32 .............................T CGGGTCATGCCTGGAGTCCACAGCGTGCGGCC 9876 30 100.0 31 .............................. TGGCCCGGCACGTGAAGTACCTCCGGCAGCT 9937 30 100.0 31 .............................. AGCTGCTGCGCGGTGACAACAAGACCGGCCG 9998 30 100.0 31 .............................. GCGACGACATGCTGGAGCCTGGCGCCGAGTG 10059 30 96.7 31 .............................C GCCGCGCGTTCCCGCCGCCGCATCGGAACAG 10120 30 96.7 31 .............................C GGCTGCACCCGGGGCAGATGCTGTACCTCAC 10181 30 100.0 31 .............................. GCGCGCCCACGGCATCTTCCGGTCGCGCGCC 10242 30 100.0 31 .............................. CGGACGGCTCCCTGGCGGGGGCTTGACTCGA 10303 30 96.7 31 .............................A CGGGTGCCCGGGTGAGCGGAAGCCGTGTGGT 10364 30 96.7 31 ............................T. TCGGCGCTGCCTGTACCGCGCAGGATGCGGC 10425 30 100.0 33 .............................. CCAAGAGCATCCTGTTCGGCGACTTCTTCGCGG 10488 30 100.0 31 .............................. GCTTCGTCACGACCGCTTGGCTGGTGCAAGT 10549 30 96.7 31 .............................A ATTCCGCCGTCCTTGAAGGCGGGCAGCCCAT 10610 30 100.0 31 .............................. AAGCCGGCGTTCCGGTCGTCATCACCGACGT 10671 30 96.7 31 .............................A AGGGGCTGCTGCGGCAGGCCCTCGACCTGGG 10732 30 96.7 31 .............................A TCAGCGGCAGGGACTCGGGCAGGGTGTACGT 10793 30 100.0 31 .............................. CCGTACGCGCCTTCCAGCGCGCACAGGGGTG 10854 29 90.0 31 ............AT...........-.... GCGACAATGGTCGGCGTACCTGTACGACGGT 10914 29 80.0 0 .........C..-GT......C.....T.. | G [10922] ========== ====== ====== ====== ============================== ================================= ================== 20 30 97.0 31 GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Left flank : ACCGACAAAATCCCACCCCACCTCCCCACGACGACAGAATCCCGATCGCCGGACACCAAGGAACCCACCCACGAAGCGCTACTGGTCGAATGCACCAACTGCCGCCGCCCAGGCCCCCCACAAGCCCTCCCCGACGGCCTCTGCCACCCCTGCCACCGCGCACACACTCACGGCGGCGAGTCCACCGCACCCACCCCGGACGAGATCGCCGCCGTCAAAGCCCACGTCGCCAACCTCCGCAACCTCCTCAAACCCGTATAACCCCCAGGCGATGGGTCGTTGTTGGGCAGGACGGCCACACCGCACCCCGGGACCGACTCCACGGAAGGCAGAGCCACGCTCCTTCCACCGAAGCCGGGACAATGAGACCTGTGGTGCGCAGAATGGCACCAGCCGAACCACACACGTGACCATTTTGCGCCAGAAGGTGAGATATGCCGGTTTCCCAACAACATGGTAAAAACCGCCTCCCCGTCACCTAAACCCCCAGGTCACGAAGG # Right flank : GCGGGTGTTCGCGGTACCGCTTCGGCCGCCCCGTGTCCCGTAGACGCCCAGGGGCACTCGGCGCGACACCGGGCCGCCCTCCCAGTGCCCTACGGAGAGGCGCCCCGGTCGCTCAGCCCAGCCCCTCCTCCACCAGGGCCGCCCACTGCGCCACCACCCGGGCCCGGCGGGCCGTGTCGTCGGTGAGGAGGTTGGCGAGGCCCAGGCCGCGGGCCATGTCCAGGAGGCCCTGGACCGTTTCGCGGGCGCCGGGGCGGGACTCGTCCGCGCCCAGGAGTTCGACCGCGATGCGGTGGGTCTCGCGGCCCACCCGCGCCTCCAGTTCCGTGACGCGCGGGCGGAGCTGGGGCTCGTTGGAGGCGGCCACCCAGAGGTGGAGCGCGGCCCGGAAGAGGGGGCCGGTGTAGAGGTCGACCAGGGCCGCGACCACCTCCGCGCGGCCCTGGACGGGGAGCGCGCGCAGGGCCGCCGAGCGTTCCTCCGCGACGTACTCCACCGCC # Questionable array : NO Score: 5.80 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 3522-3086 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTHI01000155.1 Streptomyces sp. b94 scaffold155.1.size14459, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3521 29 100.0 32 ............................. CCGACGACTGCCAGGAGGGGGCGCAGAGCTAG 3460 29 100.0 32 ............................. CTCCAGCGGATGGGCCTGAACCCGATCGAGGA 3399 29 100.0 32 ............................. AGGCCGACCAGCGGGCGGGTCTCCAGCGCGAG 3338 29 93.1 13 ...G........G................ TGCGGGTGCGGGG Deletion [3297] 3296 29 89.7 32 ...G....T...G................ GCCGACGGGCCGCCGGGCGGGACGAATCAGTT 3235 29 96.6 32 ...G......................... GATCTCTGGGGAAGCGTCAAGCGCACCGCATC 3174 29 93.1 33 .....T..............A........ CACGGGCTCATCCCGTCCGGCATCCTCGCGGCG 3112 27 82.8 0 ............--........C.CC... | ========== ====== ====== ====== ============================= ================================= ================== 8 29 94.4 30 GTGCTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : GGCATGCGTGATGGCTCCTGTGACGGACACGGGGACGGCCGACGACCGGGGAGGGAAGAGCCCTGCGCGAGCGAGCGCCGGGCGGTGGCCGCGCGATGACCGCGAGTCCCCCGGCTGCCGGGTGGCCGAAGTTGACGCGTCGAAGTCTCGCCGCGCACCACCCACGGGGTCGTCCCCCCAGCAGCCGAACCACGCCCTGCCCGAAAGTGCCACACTCCGCCGACCGACACCCCTCGGAAGTGCTACCGCCGGGCATCCTTCTTCCGACCGATCGCGGCGGCTGGGGGCGAGGCCCCGGGGGGCTGCCGCCAACAGTCCGGGGTACGACCGAAGTACGGGACAGGGCGCTGGGTGAACTGGCAGGCTGGGAAGCAGATCCCCGGGGGTGCTGACCTCGGCCTACCTGGCAGCCCATTCGAAACTTGAGGCCACATATGCCCGACTCTCAAGAAGTTCCCCAAAACGACCCCTCGGCCGGATAAACCCGCAGACCACGAAGG # Right flank : TCCACACCCCCGCCCGACTCCACCCAGCCGGGCCCCCTCCCCTATCGCGATACGTACACCCACGGCCCCATCCACCCGACAACACCGCAGGTGACGTGCCCTACGGTCTCCGTTCATGAGCCGAACCACGCCGCCCCGCCCGGTGAACATCGAGGCGCTCTTCCTGAAGCTGGCCGCGTTCCGCGGTACGACGACGCGGCTGCACCCGCGGCCCGGCCGTCCGGACGCGGCGGCCAGTTCGGTCGGCGGCCCCATGCTGTGGCCGGCCGACGAACCGTGGCCGGTCTGCACCGAGCCGCACAAGCGCAGCAGCGGGTACCGCATCGCGGACGTACGACGCGAGCGCCAGGTGCTTGCGGACGCCTGGGCCCGGGACCGCCCCACCGATGAGGAGCGGGACCTGCTCAAGGAGCTGGACCGCAGGCACCGTCAGCGCGAGATCGCCGACACCGATCCGATCCCGCTGGTCGTCCTGGCCCAGTTGTACCGGCGGGACGTCC # Questionable array : NO Score: 5.42 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:-0.24, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGTGCGGGGCTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 20989-21689 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTHI01000048.1 Streptomyces sp. b94 scaffold48.1.size27085, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 20989 30 96.7 31 .............................T GTGAGTTGAGATACTTCTTTCGGGGTGGCGT 21050 30 93.3 31 ....C........................G TCACGGTCAGCTACCCGCACGCGAAGCTGTC 21111 30 96.7 31 .............................G CCGCGAGGTCGGTGTACTGCGGGGTGGGGTT 21172 30 96.7 31 .............................G CCAGCTCGACCAGGATCAGCCGCTCGACCAG 21233 30 100.0 31 .............................. AGTCAAGCAGCGGTCCGCCTTGCCCAGGACG 21294 30 93.3 31 ..................A..........T GTGCGACATTAATAACGGGATCTTGCTCGGA 21355 30 96.7 31 .....................A........ GTGCCGAGGCCGGCGTGCGCTGTGATCTCGC 21416 30 96.7 31 ............................T. CCGGCTCGTCCAGCAGCTCGTGGTAGCAGGG 21477 30 93.3 31 ...........A.................A GCGCGTCGCCGTACATGGCCAGGATGACCGC 21538 30 100.0 31 .............................. AGGTCACGGGGGTTGTGCTCCTGTCGGGGAT 21599 30 96.7 31 .............................A GGTCCTGCCAGTCGGTGAGGGGCCGGACTTG 21660 30 73.3 0 .....................TCAACAG.G | ========== ====== ====== ====== ============================== =============================== ================== 12 30 94.4 31 GTGGTCCCCGCGCACGCGGGGGTGGTCCCC # Left flank : GGTGTACTACCCGAACTGGGCAACCGCCGAACCGGGCGAGCACGTGGCCGACATCGCCATCCCCTTCCGCAGCGTCTCGATGCCCGGCCTCTGAAGGTCAACCGACGACGGTCGACACACACCGCAGGTTGCAACCGCCGACCTGCGCAAGCACCTCGGAAGACCGCCATACCGGCCCCGAAGGAATAGCCGCGCCCCAAGCGCACACCATCAGCCTCCGCCACCCCTCAAACCGTCGAACCCGTCGAACCCGTCGAACCCCAACCACGAAGCCCCTCCCGAAAAGGGGGTAGGCACACCGCACACCGGGGTCCAAAGCCACGAAAGACAGAGCCGCACCTCTTCCATCGAAGCCGGGCCGATGAGACCGGGTGGCGGGCAGAATGGCATCAGCCGAATCACCCCTGTGGCCACTTTGCCCCGGAGAGCGAGATATGCCGGTTTCTCAACAAGTTAGTAAGAACCGCCTCCCCGCCACCTAAACCCGCAGGTCACGAACA # Right flank : GCGAATGGTCGCGCGGCTCGCACCGCTGCCTGGACGAGGAACAGCCCAACCGGTCAGTACGTTTGGTCGTCTCCATCGTCATCCCTTGCGCGTTGGGCGTTGTGTCGGATGTGTGCGTGGTGGGCGTCGCGGAGGGGGTCGGCGATGTGAAAGCTGTGGTTGCCGGGGTGGTCCTCGTACAGTCCGCACCACTGCCGGTAGTTCTCGCGGAGGCGGTGGATGCGGTAGGGGCAAAGGGCGAGGAGGACGAGCCGGTGGTGGACACGGTGGCCACCCGCACTCGTCGCCCACAGGAACCACAGACTCACGGGCGGTTCGGTCTCCGCGGTCCACAGGCGGGACGCGTGCTCGGCGGTCTCGTCATGCTCGCCCAACTCGCATAAGACATAGGGCTTGTCTTCGAGGAGGTCTTCGGCGTCGTCGGGGCCGTCGTCCATGGCGAGCAGGGCGGGGAGTGCTTCGTCGGGCGGGAGGTTGGTGATGGCGGTGCATTGCAGCAC # Questionable array : NO Score: 5.27 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //