Array 1 40865-39177 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFIRD010000004.1 Mycoplasma enhydrae strain 3839-13 NODE_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 40864 36 100.0 30 .................................... ACGATAACAGATGGCATGATATATATATTA 40798 36 100.0 30 .................................... TTAATAAGATTGGTGATAAGTGGTAGAGAG 40732 36 100.0 30 .................................... AAATAAATATATTCTATTTACTAAAACCTG 40666 36 100.0 30 .................................... AAAGATTAAAGTTTTTGATTTATGACAATG 40600 36 100.0 30 .................................... TTTTATTCTGTTGTATAGAAGTAATTTCTT 40534 36 100.0 31 .................................... ATAGTTTATTTACTCATATATCTGGTTCTAA 40467 36 100.0 30 .................................... TCATAACCAAAATAGCCAATTTTTGTTGAA 40401 36 100.0 30 .................................... CGACCACTAAATTATAATACTTAGGTTTTA 40335 36 100.0 30 .................................... TAACTGATGATTGAAACAAATTCAAAAGAA 40269 36 100.0 30 .................................... CCAAAGAATTACCAAACTTTGACTGGTTAA 40203 36 100.0 30 .................................... TATATTCTGATTTTTGAATTGTTATATTAT 40137 36 100.0 30 .................................... TAAAAGTTAAAGCATTTATTCAATCATGAT 40071 36 100.0 31 .................................... AAAAATCTTAGATATATTAATCATTTCATTA 40004 36 100.0 30 .................................... TATAATCCATTTTTTGAATTGTTATATTAT 39938 36 100.0 30 .................................... TAACTTGTAATAATTTTTTTGCTACTTTTT 39872 36 100.0 30 .................................... TACATAAATATATATCATTAATACTAGTCA 39806 36 100.0 30 .................................... CTTTTAATTTTTGTAACTCTATTTGTTGCT 39740 36 100.0 30 .................................... AAATTCAGATAGAACAGATCAAGCCATAAT 39674 36 100.0 30 .................................... TGGCATGTCTGTAGTTTATGATGAAAGTAA 39608 36 100.0 30 .................................... TTGTTATTGTGTTTTCATAAGTCATTAAAT 39542 36 100.0 30 .................................... GATAAAGAGTATTTCAGTAAATTGGAGTTA 39476 36 100.0 30 .................................... TAACCGATGATTGAAACAAATTCAAAAGAA 39410 36 100.0 30 .................................... ATTATGTTAATAGTTTTAATGACTTTAATA 39344 36 100.0 30 .................................... AAAGACCCTTTAGAAAAACAAATAGAAAAA 39278 36 100.0 30 .................................... CTCAATCTGTTGTTGGTAATTTTTTATCTA 39212 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 26 36 100.0 30 GTTTTGTATTGCTTAAAAATAGTATAGTACTAAAAC # Left flank : AATTTCTTGATTGTAGATTTCTTCTAATTGTAATTCATATTTCTTGGATTGATTTAGTTTTTGAATTGATGGTATTTTTTTAGTACTACTAAACTTAGTATTTATTTCAAATTCAACCTTAAAATCTTGATATTCGATTGCACTACATTTTGAAACTAGTGATTTTAGTTTATCTAAAAAACTTGTAACTTCTAATGAAGATTTATTTAATGAATTTTTTAAGATTATTGTTGAAATCAATTTATTAAAATTTATAAAATTATCTTTAGTTAAATTTTGTTCCAATCAAAACAAAATTTTATTCTTATTTGAAATAAATTTTTGATGCTCTTTATCTTTCATTTGTTCCTCAATTAAATTCAAAATATAACAATAATAAATTACTGCTAATTTAAAACATACCTTTAAATTATATTAAATAATTATTTAATATGTTAATTATCTATTGATTAATAATATATTAGTAAATCATATTATTATTTAAGATACAAAACACAGTG # Right flank : GTCAAATTATTGAAATTTTCAACAATTTGACGCCTTTTTTTATTAAATTAACTGTTTTTTTAGTTTTATTTGCTTAAACTCATTGTTTTTTAACTCTTCAAGAACTCTTTCAGAATTTACGTTTTTAACATTATATTCATCTTCAAATCATATTTTTATGGAATCAGTAGAAATAAATTGATATAAATTAGATTGTTTTTCAAAAGCGCAACACTCTAATTCATTAAGATTTTCAATAATTGAAAATAAATTATTAGTTATTACTAGAAAATTAAACTTATTTAAATATTTGTTTAAAGTAGCACATGGTATTGTAAAATCTTTTAATATTATTAATTGCTTATTAGTTGACTCAAAATTACCTAGTCATTTTTCAAATGTTTTTTCACTAATAAACTTTTCATCATCCAAAGATATTAAATTTTTCATTATTTTAATTTTGTCCATGTTAATGGTTAAAAATTCATCAGAAATTCAATCATTTATTTTGTCAATTTCTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGTATTGCTTAAAAATAGTATAGTACTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [80.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //