Array 1 109788-106578 **** Predicted by CRISPRDetect 2.4 *** >NZ_WITJ01000010.1 Lactococcus hircilactis strain DSM 28960 Scaffold10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 109787 36 100.0 31 .................................... TCAAGCGTGTTACATTCTTGTATTGTTCCCA 109720 36 100.0 31 .................................... CAGAACAGTAATGGATTCACTCTTGTGGATG 109653 36 100.0 30 .................................... AGCTTCTAAAACTGAGGGTTACGGATTTAA 109587 36 100.0 30 .................................... CATTATTTTTGATACGAACATTAGTATTTA 109521 36 100.0 30 .................................... TATCAGTTACACTTGATAAAAAAACACCTA 109455 36 100.0 30 .................................... ACATCACCGAGAAGCAATTTTATAAGGTCA 109389 36 100.0 30 .................................... TAATATTCATTTTCTTTCTCTTTTCTAGCG 109323 36 100.0 30 .................................... TAAGACGGTTACGTCCATCACCAAAGAATA 109257 36 100.0 30 .................................... TAGAGCAGAGATAACTGAACGTGTCGTGGT 109191 36 100.0 30 .................................... ATTTCTGGTCTATGACCTTTGATGAAATAA 109125 36 100.0 30 .................................... ATAGCTTTCAATGAATTCCGCCACACACTC 109059 36 100.0 30 .................................... TCCTTCAACTTTTTCAAGACCAGGCTCTGT 108993 36 100.0 31 .................................... AAAATGATGTTGTTCTATTTTTTCTTCTTGC 108926 36 100.0 30 .................................... CATTAACAATTGCTACATCCCCAAGATTAG 108860 36 100.0 30 .................................... AAAGAATGGCTTCTACAATCAGACACAATA 108794 36 100.0 30 .................................... CAGTATGCCAACCAATTGACAACCAAATGT 108728 36 100.0 30 .................................... CAGTATGCCAACCAATTGACAACCAAATGT 108662 36 100.0 30 .................................... ATGGAGTTGTCTATGAGCCTGATGTAGAAG 108596 36 100.0 30 .................................... TTAATATATTATTTGGGATTGCGTTTCTGA 108530 36 97.2 30 T................................... AAACCACAGCAAGCCCTGCCAGTCGTTCCT 108464 36 100.0 30 .................................... AAGTTTCGTACTGGTCAAAAGAGCAAGTCT 108398 36 100.0 30 .................................... CGCATATGATTTTCCAATAGCTGAAGGTTT 108332 36 100.0 30 .................................... AAATAAGAAATTATAGAGCGCATAAGTTGC 108266 36 100.0 30 .................................... CCACAGCTTTCTAGCTAACTATATAACACA 108200 36 100.0 30 .................................... TTAATTCGTTTCTTGTACTCTTGTTGTCGT 108134 36 100.0 30 .................................... AAAATCTAAATTTCATCAGTAGTCCTCTCC 108068 36 100.0 30 .................................... GAAAGTTTCTTCGTTTGGATTATGAGGAGT 108002 36 100.0 30 .................................... TACTTGATGAGTTGACTGCTTTTCCGAATG 107936 36 100.0 30 .................................... TAGCTGAAGTAGAAGAAGAATTTGTCAAGT 107870 36 100.0 30 .................................... ACTCACTTAAAAACTACTTGTCAACAAGTG 107804 36 100.0 31 .................................... GTAAATAATTGAAAATATTTTGGCACAATAT 107737 36 100.0 31 .................................... CCGCCCATTCCGCTTGTGATTGCGACTGCTA 107670 36 100.0 30 .................................... GGATGGAACGTGTTATTTCAGCTCGTGGTA 107604 36 100.0 31 .................................... TATGCCCTTCCTAAGTCAAATTCACGCTTAA 107537 36 100.0 30 .................................... TTACGTGTATCATTTCGCTAGCGTTGTATT 107471 36 100.0 30 .................................... TAAGTGGTATCAATTCACGACACCCTATGT 107405 36 100.0 30 .................................... CTAAATATATCATTCTTGAACTCTTTACTT 107339 36 100.0 30 .................................... GCCGTGACGCATTGAGAGAACAACTTGTTG 107273 36 100.0 30 .................................... TACTTGATGAGTTGACTGCTTTTCCGAATG 107207 36 100.0 30 .................................... ATTCTTGATACCCAATCGTTCCATTTGTTC 107141 36 100.0 30 .................................... ATAGCTTTCAATGAATTCCGCCACACACTC 107075 36 100.0 30 .................................... TCCTTCAACTTTTTCAAGACCAGGCTCTGT 107009 36 100.0 30 .................................... TCCGTCGTGATTGTTCATGAATGGAATAAA 106943 36 97.2 31 ................................G... CGCTCGGTAACCACCGACTAATTGTAGGAGA 106876 36 100.0 30 .................................... CAGTATGCCAACCAATTGACAACCAAATGT 106810 36 100.0 30 .................................... CAGTATGCCAACCAATTGACAACCAAATGT 106744 36 100.0 30 .................................... ATGGAGTTGTCTATGAGCCTGATGTAGAAG 106678 36 100.0 30 .................................... TTTACATTGTTTTGTGAAAAATATGATATA 106612 35 83.3 0 ...........................T-...CTCA | ========== ====== ====== ====== ==================================== =============================== ================== 49 36 99.5 30 GTTTTTGCACTCTCAACATTTTCCTATCAGTAAAAC # Left flank : ATCCAACAAGCTTTTTGATGACCGAGAAGATACAAGACTTGCTTGAGGGGCTGTCAGTACTGACAGAAAAAACGGGACTTCTAAAAACACTTGTCATAAGTCAGAATGCTTTGGACTTGGTTTATTGTCGCGAAGACATTCCGAGCACCGTCGTTTTGACAGATGAAAATTGTCAGATGCCAGATTTTGATCATTTTAGAAAAAGTATTGAAAATCATTATCCGACTACATTCACGGCGACAGATGATGCGCTCATTGAGAATTTCTATGAAATCGTTTCAAATATTGGGAGTAAGTCAAGAGTGGCTGGGAAATCTTATCAAAATATGTTATTATTGAAAGTGTTAAATGTGATTTTAGGTTTTGAGACACCAGAGTTTTCTTGTAATTTTGATGAACTTTCCGAACTTGAACGCCTTTATCTTAATTCCTGAACATTGACGAATTTTCAGGACTGACGAAAACGTGCAGAAGCAAAAATCAAAAATTTTTAATTTGAG # Right flank : TTTGTTTTTATCTAAAAAGTGCGGGGTTAATCCTCTATCTTATTGATACAAGAAGGTACTTGATTTTATTCAGCGCGATTGATTGTGTGTAGCGTTTTTTTGCTTCAATCATTATTTCGTTTTAAAAATTTAGAAGAATCAATCTAAGTTTTTTGATTAGGGGATGAAGCTGAGCGATAAAAGTGATATAATTGATACCATGATCTATGGAAATGGTGTTGATAATGTTGAATTATCAAGAATTCAAGCAGCAATGGGGCGTTCTGAAAAGTTTGTGATTCAGGTTTTAACTGCTAAAGAGTTTGAAAAATTTCAGATGTTTTCTTCTGAGCGTCGTAAGGTTGAATTTTTGGCTGGACGTTGGGCAGCTAAAGAAGCTTTTTCAAAAGCTTTTGGGACTGGGTTTGGCCGGAGTTTGGCGATGCATGACTTAGAAATTCAAAATGATACGTTGGGGAAGCCTTATTTTTCTAAGCATCCTTTTGAGGGAGGAAATGTGC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGCACTCTCAACATTTTCCTATCAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //