Array 1 445-961 **** Predicted by CRISPRDetect 2.4 *** >NZ_CYAV01000016.1 Escherichia coli strain 503225_aEPEC, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 445 29 100.0 32 ............................. TTTGTATTGAATAGAGGTGGATGGTTAGATGT 506 29 100.0 32 ............................. AACTCCGCATCAGTTAGATACGGCATAAAAGT 567 29 100.0 32 ............................. CACTCCATGCGCCGCCGTAATAAACGCGCCCG 628 29 100.0 32 ............................. GCTGTTTCTGATCTGGCTGGTGACTTTGACAA 689 29 100.0 32 ............................. CCGACCTCATTATGTTTATCTACCGTGACGAG 750 29 96.6 32 ............T................ CCTGTGAACTTGCCGAAAGACAGCAGGCTAGA 811 29 96.6 32 ............T................ TGCGTAATAGGCTGTGTGCATTACTCAGACAG 872 29 96.6 32 ............T................ ACTACCGTTTCCCCTGTAATTTATCCCGTAAA 933 29 96.6 0 ............T................ | ========== ====== ====== ====== ============================= ================================ ================== 9 29 98.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : ATTCTGAACTTTTGCTTTGCCACGGAATGGTCTGTGTTGTCGGGAGGATGCGTGATCTGATCCTTCAACTCAGCAAAAGTTCGATTTATTCAACAAAGCCGTGGACGGCTCGCAATCTGGTTACTGGAAGTGCGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAAATGATCTGGCAGCAAATTACCCAACTGGCAGGTTGCGGAAATGTGGTAATGGCCTGGGCGACGAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAATAGACGTATTCCGGTAGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAAAATCAATAGGTTGTCTGTTCTTTAAAAATGAGGAAATGTTTGAATTTGGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGATATGTATGCTTAGTG # Right flank : GGACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCGCCCCTGCGGTAGAACTCCCAACTCCCATTTTCATACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCTGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCTAAGATTCCAATTTGTTGCTTCTACCGAAAGTACGGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGTGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCACTGTTGAAATACAATTTATCGCCAAC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : GTGTTCCCCGCGTCAGCGGGGATAAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //