Array 1 87190-86762 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEHA01000021.1 Eisenbergiella tayi strain NML150140-1 BEI59_contig000021, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 87189 32 100.0 35 ................................ CTTACAGTCCGTTGGTTTGGTATAGTTCACTTATT 87122 32 100.0 33 ................................ CTTTGACACTGGACGGATACCGCAGAAAATTCA 87057 32 100.0 34 ................................ CTTCCTTTTGGTTTACCACACACTTTGCAATTAT 86991 32 100.0 34 ................................ TAATACAAGCACCCTCCGGAGCACCGTCTGCATC 86925 32 100.0 35 ................................ TGCCTCTTCTTCTACTATTTCAAGTTGTCTAAATT 86858 32 93.8 33 .............C.................A TTCTTTAAAGGCGATAATTTCACCATAGGATTT 86793 32 93.8 0 .............C.....T............ | ========== ====== ====== ====== ================================ =================================== ================== 7 32 98.2 34 GTCGAAGCCCTTGTGGCTTCGTGGATTGAAAT # Left flank : AATTTCATTCATAAGTAAGACAATGATTTGAAGAAAGAATATTGCGAAAGATTTGAATCAATATGAAATTTATCTTAGATATAGATACTGCAGGAGGTATTATAAAAGTCTTAGTTGAAGTATAGGAAACTATGTACAATTTACGAATTAATGAAGAAAGTTGCTTATCACTTTAAATTTTTTATGCTATACTTTAATTTATAGAAAAGATTGTTATTGTATAAGTATAACAAAATGCGAAGTAATATGTTGATTTGATGTTGGTATGAATAGAGTTTTCAAGGGTTAAGGGCACTGATTCAATTGGGAAAAAGGGAGCGATTTATGTTGGTGCGAATAGGAAGCGCACATGAAAGTCCCGGGAGATTCGCACCAGAAAAAGAGTTGTTATAATGGTGAATAGATTGAAAGTGTTTTAAATAAAGATTATATGAGAGAAAAAATAAAATAATTATACAAATTAAGTTTGTGTAATGAGATTACTTTTAGTTATATTTGCT # Right flank : AAGTTCGCCCCTGGAGAAATCCAGGGATTTTTTTGTATAAGCCCTGCGGTATTGTGAGTAGAAAAACAAAATTCAAAATATTGTAAAAAAGTCATTGTTTTGTGGAAGAATGATTATTAAAGGATAATGAGCTATATTTTAAAAGAATATTTTAAGAATGTAAGAGAGTGAAAGTTCAAAATTAACAAAACTATCAGAAAATCAATAATAAAAGAATTATTGATTTTCTGATATATTGAAACAAATGAATGTATTTATATTTGTTTTATGCTGATGAAACAATTAATTATCATAAGAGTAAGCCAACTGAATGATAGAAAGGATTTGAAATACAGGTTAAATATTATGAAATGGGAGATTGTCTGTGTTTTGTCCTTTTTTGTAGTGGTTGAAACATATGCTAATTCGTAATATCAAAAGGACAGAATTAGTAATCAGGCTGCTTACAAGGGACTAAGTGATGGAGATTGTGAAAGCATATGAGTTATGGAGGTGCAGTA # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAGCCCTTGTGGCTTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAAGCCCTTGCGGCTTCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 31219-30264 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEHA01000041.1 Eisenbergiella tayi strain NML150140-1 BEI59_contig000041, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 31218 32 100.0 34 ................................ TACCAGACGCTTTTTCTCTTCTGCTACAGCCTTC 31152 32 100.0 33 ................................ TTCAAAGAAAGCCGGAAAGGCCATTGTAAAGGC 31087 32 100.0 34 ................................ CCTGTCAAGTGTTGGCTTCAACCGTAACCCACGG 31021 32 100.0 34 ................................ AACAGGGGAGGCGGTATTTTACTGGCCTGACAAA 30955 32 100.0 35 ................................ CCAATATCTCATTAGAATCATTTCGAACAATAATG 30888 32 100.0 33 ................................ AGATTATCAATAAAATCAACTTTATCCAGATTA 30823 32 100.0 35 ................................ GAAATAGAAAGATGATTAAAATAGTATGCTTGGAT 30756 32 100.0 34 ................................ CCCCGAATGACAGAAGCACCAGGTATCGTTTCAT 30690 32 100.0 34 ................................ AAATGAACAAAATACTATCATACAAGGCGCATCA 30624 32 100.0 35 ................................ ACAGGAACGAATGTTGGGTGGGTGAAACATATGCC 30557 32 100.0 33 ................................ TTCCAAAAGCCTTCCAATACTAGCAATTGTTGT 30492 32 100.0 34 ................................ TCAGCAGTTACCACAGAAAAGGCAAATCCGTATC 30426 32 100.0 34 ................................ TCCAGAGAATGAAAAGGAGCTTTCTACGGAACCC 30360 32 100.0 33 ................................ CTATTCGCAATATTTATAGCATGAGGCTTATCG 30295 32 93.8 0 .............T..............G... | ========== ====== ====== ====== ================================ =================================== ================== 15 32 99.6 34 GTCGAGGCTTACGCAGCCTCGTGGATTGAAAT # Left flank : TTAATTAGCGTTATATCTGATAGATATAAACGAATATTTGATTACTTATTACCTTTAAAAACAGAACTAAAAATAAATGTAATTATTTGTTTGATAAATATGGAGATTAATTTTATATGTTTAGGACAAACATACACGATATAGATATTTTTTAGTATACTGGGGATCATTTTCTTGATTTATCTATGTGGCTATTCAGTAATACCAAGTAAAAAGTATTATTTGTATCATTTATTATGTAATATGTGAGTAGAAAATAAAAATCAGTGTTATTTGTTTTATATAGTAAAAGCAAAAACAGTTTACAGTTTTAAGAGAGAGATAAACAAGGTGCGAATGTATAGTGCACATGAAATTACCGGGGGATTCGCACCAAAAAAGTGCTTAAATATTATGGACATAAATGTTTTAAGGGTTTATCATATAAAGGTATGTAGAAATATTTGTGTAAAAGTTATATTTGTAGTCTAAATCTTTATGTTTTTTTGAATGTTTTTGCT # Right flank : ATGGATATCAAATGATATATCGAACTTATATACAATATAATATTAGATGGAAAGACAGATGAAAATATGGATTGAAATATAGAATATATGTTAAGAAAAGAAATGACCATAGCCAAATATATAAGAAGTATATTTCACAATCTGTAGGAAAGAGTACATCAAAAGGCCATGTTGAGCCAGTTCATAAAGCTCTTGCTAAGCGCAGAAGAAGATGTACTATTCCAGATAAAGATGAAAGAGGTTGAAATTTTGGGAGGAAAAGAAGCATCAAGAGGTTTTTTATATCAGGCATTTGCTTCCGTTCTTGAAGCGTTGTGTCAGAAAAATTGGGATAAAATTTATATAGAATTAAAGTCAAATGATGATAAAGTTGATATTGCATTAGAAGAAAATGGCAGAATTATTAAAAGTATTCAAGTGAAATCAACAATTAATACTTTTAGCAAAAGTTCAATACAAACATGGCTAAGTGATCTTATTCGTGACGATGTAGGCTCGGC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTTACGCAGCCTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAGGCTTACGTAGCCTCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.60,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 34680-33990 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEHA01000041.1 Eisenbergiella tayi strain NML150140-1 BEI59_contig000041, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 34679 32 100.0 33 ................................ TGCAATATGGTATTCCCACTATTCCTTGCCCTG 34614 32 100.0 33 ................................ CTGGCATCCATGCCTTTGATTGCCCCGCTGTCG 34549 32 100.0 35 ................................ GGAATGCCAATCCGTACCCTGGAAAATTGGGACCG 34482 32 100.0 34 ................................ CCCTGTATGAACAAACTACATCCATCAGAATCTC 34416 32 100.0 34 ................................ ATTACAACCTCTGTCATGAATATGACGAAAACAG 34350 32 100.0 34 ................................ ACATCGTCGCTTGCAGATAAAAATGCTTCTCTAT 34284 32 100.0 33 ................................ ATGGTAATACCTCGCTTTCTTTAAAAATAATTA 34219 32 96.9 34 .......................A........ TATCTGGGACAAGCCATGGATATTGTATGGGTTT 34153 32 90.6 34 ...A.......C.C.................. GGTACAGCGAAGAGGGATTTCTGGCACAGGCCCA 34087 32 90.6 34 ...........C........A..........C TGAGAATTGTTGTTTTCCCACATCCAGACTCTCC 34021 32 81.2 0 ...........C......CTT.AA........ | ========== ====== ====== ====== ================================ =================================== ================== 11 32 96.3 34 GTCGAGGCTTATGTAGCCTCGTGGATTGAAAT # Left flank : ATCATGCGGATTTATGATATTATGAATGAAGTGATGAAGTGTTCCTTTGAAAAAGTGGTACAGGCGAGAGGAAACCGGGCCGGTTTGTATTATCATGGACGGATTGTGGACGCTTTTGAGAGGAAGGATGATGAAGCGGCTGAAAAAATAATGGATGAGCATATGAAAGAGTTGTATGAGAGCTTTTTTAATGATTTTAGGGATTGAGAATGCTGTATGGACTTATTTTATTAAGTAAACGTTATATTGAGTAAAAAAGAATTAGTGATATTTGTTTTTAGATGATAAAATAAGAGTTGAGTTTATAATTTTAAGAGGGTCATAAGTAAGGTGCGAATGTATAGTGCACATGAAAATACCGGGGGATTCGCACCAAAAAAGTGCTTAAATATTATGGACATAAATGTTTTGAAGGCTTATTATATAAATGTGTGAAGATGTATTTGTGTAAGAGTTATATTTCGGGGTTAAATGGTTATGTTTTTTTGAATGTTTTTGCT # Right flank : TGCATGACTGGTACAGGCATTATTTATTGTATGTCGAAGCTTATGTAACATCGTGTTGAGTTTGGAGGAATAACGATGCTTATGTTGTCACAATTCTATGAAAAAATTGTAACATCCGAGAAAGCTTCCAATAGAAGATACTGTGGAGGCAATAACAATTGTGTCGAAGCATTTTAAGGTAATTTATAGTATGAAAAAATAATTATTTTGATTTAAACTAAAAAGTGTGCATAAATTATTTGTGTAAATATCTGAGTTATTTAAAGTATTATATGAGCCATGTTATAAAATATGGGAAGATCAAACAATTGTAGGAAGAGTATAGAAAAGGGATGAGTTATGGAACCTTCAAAAAAAGATTGGTTACTATATAGGGAAAAGATAGCAGGTTGGCAGGAAGCTTATATGGAAAAGCTAATAAAAGAATATGTCGATTATCTGAATGGTGACGAACCTGCATCTACAAAATTCTGGAGAATGGAAAAGCGTATCAAACAGGA # Questionable array : NO Score: 9.07 # Score Detail : 1:0, 2:3, 3:3, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTTATGTAGCCTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGAGGCTTACGTAGCCTCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.60,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 46335-45714 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEHA01000041.1 Eisenbergiella tayi strain NML150140-1 BEI59_contig000041, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 46334 32 100.0 33 ................................ ATCATATCATATAGCACCTGCCTTTTCATTTCC 46269 32 100.0 33 ................................ CAGAACAAACATAAAATTGTCTATTGTTAGACT 46204 32 100.0 34 ................................ CTATCAAAGGTAATAATGATAAATCCTTAGTACC 46138 32 100.0 34 ................................ TTACAGATGGTCATCACAGGAAGGCAGCTGCTGA 46072 32 100.0 34 ................................ TTCCGTGGTTTGTGTGATATGATCCATTTTTACC 46006 32 100.0 32 ................................ CAATACTAGCAATTGTTGTTTTACTGTTATAC 45942 32 100.0 33 ................................ GGTTGTCGGCCGGCCACAGCAGATGCATATATT 45877 32 100.0 33 ................................ AGATGCAGTATTATCTCCCACTACCATAAAAGG 45812 32 96.9 35 ......................T......... CGGGTTGCGGAAGAAAGCATTATGGAAACAGCAGG 45745 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 10 32 99.7 34 GTCGAAGCCTATACGGCTTCGTGGATTGAAAT # Left flank : GAGGCTTGATATATAAATATGAATTACATTTTGAAGTAATATTTTTAATGATAAAGTAAAATAAATTCTTACGAATAGGATCTCCATGAATGTATAAATGAACTTTGGGTAATTTGCGGATTAGTGAAGAAAGTTACTTATCATTTTAAATTATTTATGCTATACTTTGATTCATAGAATAAAACTTTACATTACTGTTTGTTGTTATAGCATAAGGAATAAGAACAATAAATTTTATAGTCATATAATAGTTTATTGTTAGCATGATTAGAGTTTTATTGAGTAAAAGTACTTGTTTAATTATGAAATTTGCGAACAGAGTTATTGTTAGTGCGAATAGGAAGTGCACATGAAATTCCCGAGAGATTCGCACCTGAAAAAGAGTTGTTTTAATGGGGAAGAGATTGAAAATAATTTATATAAAGATATTATGAGGTGGAAAATATAATAAGTATATAATTAAGTTTGTGTTATGAGATTGTTTTTTGGATATTTTTGCT # Right flank : TGTAAGAAGTCGCACCTTGCATTGATGTAAATTGCATATTATTCATAGTTAAAACTTATCCAATAGTAAGCTGTCGTTTTATGTATCTAAGAAATAAAAGAATACATCCACTAGACAACACATTTTCGCCCTTATGACGTTTGTCAATTATTATCTATAGTAAAACAAAGAACGATTTATAATACCTATACATTCTCTTACAAAATGAGGTGAAAAAATGGGAAAGAATGAAGATTCTTTCTTCCTGAATTACCTGCCAATAAGTATAACTTTGGTATCCTTGGAAAAGGCTGAATTACCCCCTTTTTTGGGTTCTGCCCTTCGCGGTGTAATTGGACAGGCATTATTTCAGGATAAGAATGCCTACAATTATCTATATCACAACGGCAAACTGAATAGTAATATGCAAGATATAATTAATCCGTATGTGCTCATTCCTCCTGATACAAAGAAGCAAATATACTTTGAAAAAGAGGAGCTAAACTTCAAAATACTTCTTC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAGCCTATACGGCTTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGAAGCCTATACGGCTTCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.60,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 48092-47135 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEHA01000041.1 Eisenbergiella tayi strain NML150140-1 BEI59_contig000041, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 48091 32 100.0 34 ................................ TCCCGACTCCCTGCGGCCCGGACAAGATTAACAT 48025 32 100.0 33 ................................ CTCATATCTAATTTCAATACCAAGTTCTTCCGC 47960 32 100.0 35 ................................ GCATCTCCTACAAATGTATCAAGGTCACACTTATT 47893 32 100.0 35 ................................ GCATGTACCGCACATCCTACAAGAATCATTATGCC 47826 32 100.0 34 ................................ AAGTCTAATAATGCGAAGCGCTTTAAGGCTTTGC 47760 32 100.0 34 ................................ TTATCTAAGTCTGAGACATAGCAGCCCCAACGGT 47694 32 100.0 33 ................................ AGCTGGCCGATGAGACAGAGGCAGAAATGCAGC 47629 32 100.0 34 ................................ TATATTTGTCCAAAATTCCCCGCGCCTTATCATC 47563 32 100.0 33 ................................ ATATCCGGCCATTTCAATCTCTCCTCCAGAAGA 47498 32 100.0 34 ................................ CTTTGACATGTACCTCCCTACCAGAATGTCATTA 47432 32 100.0 33 ................................ CTGCAGCCGGTTCCGTATGTCTTCTTTCCATTC 47367 32 100.0 34 ................................ TCGCACTCTGCCGTAAACCCATCCCGCTGCTCAT 47301 32 100.0 35 ................................ CTGGAGTGACGATACCACAATCCCGACAGGTGGCA 47234 32 100.0 33 ................................ CACAAGAGCAATTGTCTTACTATGCTGTTCCCG 47169 31 90.6 0 .............A...........G-..... | A,TTT [47144,47146] ========== ====== ====== ====== ================================ =================================== ================== 15 32 99.4 34 GTCACCACCTTGCGGGTGGTGTGGATTGAAAT # Left flank : ATGAATATCCACCTTTTTTCTGGAAATAGGAGGCTGTCATGCTGGTATTAATAACTTATGATGTGAATACGGAAACTGCCGCGGGTAAGTCCCGGTTAAGAAAAGTTGCAAAGCAATGTGTGAATTATGGAACAAGAGTACAGAATTCTGTATTTGAGTGTGTTCTGGATCCCGGACAGTGTTTAATGCTGAAAGCTGCATTAACGGAATTGATTGATGAAAATGTGGATAGCCTCAGATTTTATTATTTGGGGAATCAGAATAAGGCACGGGTTGAACATGTTGGAGTGAATAAGGGGATTAATGTGAAAGAGCCTCTGATCTTTTAGTGCGAACCTGAAGCGCACATGAAATCCCCGGGGGATTCGCACCGGAATTTTGATGAGATATTGCTTGGGGTTGCTTTTTGATGTGGAAGAATGTAAGATGTAAAGTGAATTGGGTGTGGATTGTTGGTGAAGATGAATAGGAATTAAGAGTGGTTTTTGTGCAAAATTGCT # Right flank : ATATTATTGCGATTAGGGTATTTATGTAAATCTCATAAGTATATTGCCATAACATTTTTTGTAGGCAATACGATGGGGAATTCATAGAGAAGAGTATGATTTGAGATAGGGAACAGGATAAATATATTATGAATACTTAAGCAAATGACGTTACCAGTCTGTCTTGTTTTGTCACGGATAGAAAATATATTAGAAAGATTACCATTATTAATCATAATTTTCATGGATAAGTTATTATGGCAGGATGTAGATATTATAAAAGGTTTTAGGTGGAAGTAGATGGAGATTTACTGAATGAAGGAGGCTTGATATATAAATATGAATTACATTTTGAAGTAATATTTTTAATGATAAAGTAAAATAAATTCTTACGAATAGGATCTCCATGAATGTATAAATGAACTTTGGGTAATTTGCGGATTAGTGAAGAAAGTTACTTATCATTTTAAATTATTTATGCTATACTTTGATTCATAGAATAAAACTTTACATTACTGTTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCACCTTGCGGGTGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACCACCTTGCGGGTGGTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 5 56286-55928 **** Predicted by CRISPRDetect 2.4 *** >NZ_MEHA01000041.1 Eisenbergiella tayi strain NML150140-1 BEI59_contig000041, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 56285 31 100.0 35 ............................... CTCCTTAATAATGCAAATCAATGCCGCCCGGCAGT 56219 31 100.0 34 ............................... CATAATTTACTTATTCCAAGGACTGGCGGATGCC 56154 31 100.0 34 ............................... CTGATGCACCGTAAGTGGCATAAATGGCATCAAT 56089 31 100.0 33 ............................... CATATCCATGATGAAGTAATCCTGGAATGCCCT 56025 31 100.0 35 ............................... ATAACTACAGAAATCCATCCCTGATCGTTGGTGAG 55959 31 96.8 0 .............................T. | A [55948] ========== ====== ====== ====== =============================== =================================== ================== 6 31 99.5 34 GTCGAAGCCTTGCGGCTTCGTGGATTGAAAT # Left flank : GATATGATTGATTTTATTTTGCAGAACAGTTATTTTTAATTTATTTATCTATGGTAATTATACACTTGCGTGTATGAAATAGGAAGATAATTCTTGGGAAGAGTTGAATGGAATGAGGGGGAAGGGGTTACTGGATAGTGTTGAGAATAAAAATTGAAATTTGAGTAATTTACGAAATGGAGAAGAAAGTTTCTTATCATTTTGAAAAATATGTGATATACTTTTATTTATGGTATGAGGCTTTTGGAAGGTAAGTTTTTTGATGATATGAATGTGGGTATTTGAGAAAATAGTTGGTCAATGGTGATATTTGATAATTGAGTTATTTGGTGCGAATAGGAAGTGTACATGAAAATCCCGGGAGATTCGCACCTGAAAAATGGTGGATTTAATGGTGAAAAGATTGAGAATGATTAAAATGTAGTTATTGTGAGTGGGGATATTATAATATGTGTATAGATTGTTTTGTGAAATGAGATTTTTTTTTGGATGTTTTTGCT # Right flank : ATCTTAATATCCATAGAGTTCACATACTGCTCGAAGCCTTTACCGTGTCAAGTATCAAAAAAAATTTTCAACATCTACATAAAAATAGTAATTATAAACAAAAAATGTATTTCATGATATAATGAGTAGGATAAAATAAACAAAAAACACCACACTTTTGGAGGAATATTATGTTCTTAGCCCATATCAGTGAAGATAAGCTTCGTGAACAAAGTATTCTTGATCATCTGGAGGGGACTGCTGAATTGGCAGGTGAATTTGCCTCTGCATTTGGAACTGAAGCTTGGGGATATGGCTGCGGCATGATGCATGATATCGGCAAATATTCCGATAGTTTTCAGAAGCGTATTCATGGGGGAAAGCTGACGGACCATGCCACTGCAGGTGCCAGGGAATTATATCAAAGACATAATTATGTCTGCGCATATTGTATATCAGGGCATCATACCGGACTTTTAGATGGAGGAAGTGCGGCCGACGTGGGAGGCGAAGCCACATTA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAAGCCTTGCGGCTTCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAAGCCTTTGCGGCTTCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.70,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //