Array 1 858050-858349 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP069061.1 Bacillus safensis strain F6 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 858050 32 100.0 35 ................................ TTGACGAGGATTACTTGGATAATGCAGTAGATATT 858117 32 100.0 36 ................................ ATGAATTTATCATCAAAGCTGCCAGACCTTACTGCT 858185 32 90.6 35 ....T.C....C.................... TACCCATTTTTTCAACATGGAATACTGCAGTAACA 858252 32 84.4 34 ......C....C.......T.T.A........ TCCCCTAGCTGCGCAATTTGGTGATTGTCAATGA 858318 32 90.6 0 ......C........G.....T.......... | ========== ====== ====== ====== ================================ ==================================== ================== 5 32 93.1 35 GTCGCATTCTATATGAGTGCGAGGATTGAAAT # Left flank : TATCATTTCCTAAAAAATGTTACAATTAGGGCAGAAATCGCAGTCGCACTCTATATGAGTGCGTGGATTGAAATTTGTGGAATACGCAAATATTTAGATGGAACAGCTGTCGCACTCTATATGAGTGCGTGAATTTAAATAATGATTGTTTGACCATGCTCAGGTGCTTCTATGTGTCGCACTTTACATGAGTGTAGGGATTGAGGTAGATTGAAAAAAATGTTGACAGTAGTCATGTTTTTAAATGAATTCAAAGCTGTTGATGAAACAGTGAAATAAGTATGTTTTCTAGAGCAATAGTTTTTATTTAAATAGGATTAAGAAAAATTCGGTGCGAATGTGAGGTGGACACAAAATCCCCGGGACATTCGCACCTTTTCATTCGACAAAAATGATAAAAAATGTATATTATTTAGAGGTGAAAACAAAATTCTATATAGAAACTTGAGGGTTTTGACTATGATTCCCTAAAAAATGTTACAATAAGGTCGGAAATCGCA # Right flank : TTCTGTGGTGTTGGGTATTTTTTGTAGTGTTCTTCGGTCGCACTCTACATGAGTGCTTAGCCATTCTTGATTTTAGGTAAGAGAAAACATAGTTAAAGTTAAAGCATGTATGTTTGATCGGAAATTATTAGTGGAGTAACTATACTGATTAAAATTTACTTTTCCTCAAAGATTGGGAGAAGAGTAGTCATTTTAGTTAATAGAGTCAATGAATTAAAAACTTGGTGCGAATGTGAGGTGAACATAAAATCCCCGAGGCATTCGCACCTTTTTATTCGACAGAAATGAGAAAAAATGTATATTTTATGAAGGGGAAATCAAAATTCTATATCGAAATTTGAGGATTTTCACTATCATTACCTAAAAAATGTTACAATTAGGGCCGAAATCGCAGTCGCATTCTACATGAGTGCGTGGATTGAAATACCTTTATAGTTGAATCGTGAATCAGGTTTTACCGTCGCATTCTACATGAGTGCGTGGATTGAAATTACGCAAGT # Questionable array : NO Score: 8.63 # Score Detail : 1:0, 2:3, 3:3, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATTCTATATGAGTGCGAGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.00%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 858742-859037 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP069061.1 Bacillus safensis strain F6 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 858742 32 100.0 34 ................................ ACCTTTATAGTTGAATCGTGAATCAGGTTTTACC 858808 32 100.0 34 ................................ TACGCAAGTTGCAATCTAAATAAACCAACCGCAA 858874 32 93.8 34 ......C............T............ ATGAAAAACATTTGCTATTTCATTATTTACATAG 858940 32 96.9 34 ......C......................... AACCATTGAAATTCATAGTGTTTGACTACTGGAT 859006 32 68.8 0 ....T.C....AGC....A..C.AT..T.... | ========== ====== ====== ====== ================================ ================================== ================== 5 32 91.9 34 GTCGCATTCTACATGAGTGCGTGGATTGAAAT # Left flank : TGCAGTAACAGTCGCACTCTACATGAGTGTGTGAATTGAAATTCCCCTAGCTGCGCAATTTGGTGATTGTCAATGAGTCGCACTCTATATGGGTGCGTGGATTGAAATTCTGTGGTGTTGGGTATTTTTTGTAGTGTTCTTCGGTCGCACTCTACATGAGTGCTTAGCCATTCTTGATTTTAGGTAAGAGAAAACATAGTTAAAGTTAAAGCATGTATGTTTGATCGGAAATTATTAGTGGAGTAACTATACTGATTAAAATTTACTTTTCCTCAAAGATTGGGAGAAGAGTAGTCATTTTAGTTAATAGAGTCAATGAATTAAAAACTTGGTGCGAATGTGAGGTGAACATAAAATCCCCGAGGCATTCGCACCTTTTTATTCGACAGAAATGAGAAAAAATGTATATTTTATGAAGGGGAAATCAAAATTCTATATCGAAATTTGAGGATTTTCACTATCATTACCTAAAAAATGTTACAATTAGGGCCGAAATCGCA # Right flank : TGATTGTGTCTTAAACGGGTATGACCACCTAAAAGACCATCTTTTTACAACATCCTCTTTTCAAATACAAAAGCCATCAAAATAGACTGTTCATATGTATAGTGAAAACATGACTCCTTGCAGTCATGTTTTTTTCTTCTTCTTTTTCCTAAATAAACCTTAAAAAATCTCAAAATAAGTCGAAATGAAAAGTAGTTATTTAGATTCAAATTTTATCCATTCGTAATGAATGATGAAGGAGGAATTGGTTTGGGTGAAACGGAGCGACCCGGTAAAGTGGAGCAGCTGATCTTAGAGAATTATCAAAGATTAAACAGCATGATATCAGAAGAAGTGGACTTTGCTTCTAATCATGGTGGGCTGACAGGGGATTCTAGAGAAGTGATGTGGATGGAGTTTTTTCGGAAAATTATTCCTAAAAAATATTCATTAGCACAAGGTGTCATCATTATTGACTCAGAAGGAAATCATTCTAACGAAGTCGATATTGCCGTATTTGA # Questionable array : NO Score: 8.58 # Score Detail : 1:0, 2:3, 3:3, 4:0.60, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 867192-867751 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP069061.1 Bacillus safensis strain F6 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 867192 32 96.9 34 ...........C.................... CCATTTCGAGTTTAATCTTATTTTTTCCCTTTTA 867258 32 100.0 35 ................................ ATTCTTTGAAACACTTCGTCCAGCGTTGCCTTTGG 867325 32 100.0 34 ................................ ACGATGATGTTGTGGACGTCGGATGTAAGGCGGT 867391 32 93.8 34 ..G.....T....................... TTGTAAAACTTAGCATTGAATTTTGTGGCTGCCC 867457 32 84.4 35 A..........C..A.....A..........G AAGTAAGATCATTAAAACAAACAGAATGAATTGCA 867524 32 84.4 35 ........T..C..........AA..G..... ATTTCCAACCGTAATGAATTTACCTTGTCCTTCAA 867591 32 87.5 34 .G.........C.A..........G....... AATGCCATCTTGCAGTTCCAGTAAGAGCTTTTTA 867657 32 90.6 31 .........G..............G..T.... TAGCCGATGGTTCAGCTTGATGTTTTTTTAA 867720 32 84.4 0 A..................G.A...A.A.... | ========== ====== ====== ====== ================================ =================================== ================== 9 32 91.3 34 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : CACTCTACATGAGTGCGTGGATTGAAATAGATGTTGAGATTATTATTAATCAATTGGAAGATGTCGCACTCTATATGAGTGCGTGGATTGAAATTGATAATCCGCCATCAGCATCAGCGACAATATCAGGTCGCACTCTATATGAGTGTGAGGACTGAAATTCTCGTCAGTAGGTGGCTTGAAAAATATATTGACAATTGTGCTTGATTTAGGTGTGAAAAACATGACTCTGGCTCAGTAGCCATGTTTTTAAATGAATTCAAAGCTGTTGATGAAATAACGAACTACCTTTAAGCAATAGTTTTTAATTAAATAGGATTAAGAAAAATTCGGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTGCACCGTTTCATTCGACAAAAATGAGAAAAAATGTATATTTTTTAGGGGTGAAAACAAAGTTTTATATAGAAACTTAAGGGTTTTGATGATCATTTCCTAAAAAATGTTATAATTAGGGCGAAAATCGCA # Right flank : TTCTTGTCAGAATGTAGCTTGAAAGATATATGGACAATTGCACTTGATATAGGTGTGAACAACATAACTCTGTCTCACCCATTTTATTAATGAATTCAAAGCTGTTGATGAAACAGCGAAATAAGTATGATTATCATCAATAATAGTTTTTAATTAAATAGGATTAAGAAAGATTCGGTGCGAATGTGAGGTGAACATAAAATTCCTGGGGCATTCGCACCTTTTTATTCGACAAAATTGAGAAAAAATGTATATTTTATTAGAGGTGAAAACAAAATTCCATATAGAAAATTGAGGGTTTTGGCTATCATTCCCTAAAAAATGTTATAATTAGGGCAGAAATTGCAGTCGCACTCTACATGAGTGCGTGGATTGAAATCAGACTGACGCAAAGCCTTTTCTCTAATGTAATAGTCGCACTCAACATGAGTGCGTGGATTGAAATATCGTTGATTTAACCGGCGTGTCACCGTATTGGTCGTCGCACTCAACATGAGTGG # Questionable array : NO Score: 8.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.56, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //