Array 1 114727-113799 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG770540.1 Streptomyces sp. SPB074 supercont3.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 114726 28 100.0 32 ............................ CGCATGTACCGCGACCATCCGGTGCTGGTCCG 114666 28 100.0 32 ............................ CTGGCGTGCGAACAGTACGCCGAGTGGCGGGA 114606 28 100.0 33 ............................ CCGTTGTGGTCGCGGGACGAGAGCGCCCCGGCG 114545 27 92.9 32 .................C..-....... GCGTTCTTCGCCCGCCGCTCGCTGCTTCGTAC 114486 28 100.0 32 ............................ TGGATCCGGCCGGATCGCCAGTGTCATCGCTC 114426 28 100.0 32 ............................ CTCACCCTAATCGACGAGGGCCGCCCCTGCGC 114366 28 100.0 32 ............................ CAGATCAACGACAAGCTCAACGGCAACCCGGT 114306 28 100.0 32 ............................ CCCACACAGCGTGATCATCCGTACGGCGCAGG 114246 28 100.0 32 ............................ GCGGGCGTCTGCTCGCGGGGCGTTTCCTCGGG 114186 28 100.0 32 ............................ GACGGAACCCGGAGCGAGTGGCGGCGCCGGGG 114126 28 100.0 32 ............................ TGCTGGGGCGCCACGACCAGGCCGCCGAGGCC 114066 28 100.0 32 ............................ GGCAGTCTGAGTCTGTTCCTCCAGGAACTCGA 114006 28 100.0 32 ............................ CGCTGTTGCCTTCAGAACGTGCGCCATCTCAA 113946 28 100.0 32 ............................ ACCGACGAGGCCGCGAGCAGCGCCCGCGAGTC 113886 28 100.0 32 ............................ TCCGCTGGTAGGTCGATGCCCTCCACGTTCTG 113826 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 16 28 99.6 32 GTTTTCCCCGCGCTGCGGGGGTGAGCCG # Left flank : GGGAAGAAGCCAGTGCGAGCCCGCGGAGTGATGGAAGGAGTCCGAGTCCTCGTCCGCTGTCGTCCGGGCACCGCTCTCCCATGCCAGCAACTGATCGAACAGCGAGGTGACCTTCTTCTGGAACGGCACGCTGATCTTGCCGATGTCATGCAGTGCGGCCCAGAAGCACAGCAGCGACCGAAACCCGTCCGGCTCCACACCCGCCGATGCCGCCAGGCGCCCAGCCTGTTCCCGGCCGATCCACCCGTCCCAAAGCGCGCCGACCACCGCACCGGTGTCGAACAGGTGACAGACCAGCGGGTATGCCTCGTCCAGCCCGTCCGCCTTGCCCCACAGATGACGACACGGCAGTTCTGCCGCCACGGCAACTGGCGGGCGCTTCTTCATCACGAGCGGATGACATCATGAGCCAGTGACAGCGGGGGCGAGGTCGAAGACGCGACCGATGCTCTTTGAGTTGCGAATTGGTAACGGGGCTGCTGCGCTGCAGGTCAGGAAGT # Right flank : TCCGGAGCGGGTTCGCAACGACCTAGGCACTGTTTCTCGGATCACCGGACGCCGGTGGCGCGTTGGCGGCAGGCTGGCTGTATGGGCCGTGGTGATCTGACGAACGCGGAGTGGGATCGGCTGGAGTCGTTGTTGCCTCCTGGTGGTGCGCGTGGTGGTCGGTGGAGCGACCACCGTCGGGTGATCAACGGTGTTCTCTACCGGGTGCGGACCGGTGTGCAGTGGCGGGATCTGCCCGAGCGGTTCGGGCCGTGGGAGACGGTCTATAAGCGGCATCGCCGCTGGTCAGCGGATGGAACCTGGCAGATGCTGCTGTCTCGCATTCAGGCAGCCGAGGATGCGGCGGGCGGGATCGACTGGGACGTGTCGGTGGACTCGACGGCCGTGCGGGCCCATCAGCACGCCGCCGGGGCGCGGAAGATGCCCCCGGCCGCCGTTCCTCAAAAGGGGGCCGGGCAGGGGACGAACCAGGTCGATCCGGTACTTCGGAAGCTGGCCGT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCGCTGCGGGGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCGCCCCGCGCTGCGGGGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.00,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 124623-126755 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG770540.1 Streptomyces sp. SPB074 supercont3.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 124623 28 96.4 34 ...........................A AGCCCAGAATGTCGCTCGCCTCGCTGAGCGGGCA 124685 28 100.0 32 ............................ GGGCACACCGCCGCCCTGGTCGAGCGGACAGA 124745 28 100.0 32 ............................ AGTTCAGTGATGTCCGCGATGTACTTGCGCGC 124805 28 100.0 32 ............................ GCTTCGTGCGGTTGCTGGTGATCCACGCCCAC 124865 28 100.0 32 ............................ TTCTACTTCCTGGAGACCATCGCCGCCGAGTC 124925 28 100.0 32 ............................ GCGGAGTGCTGGACGCTCTGCGCGGCCCCGGC 124985 28 100.0 32 ............................ GCGGCGCTGGGGGTGCGGGCGGGCGGGCTCGG 125045 28 100.0 32 ............................ AGCACGGGGCCGTGGACGGCGAGCGGCACAGT 125105 28 100.0 32 ............................ CTCGCGGTTTGGAACTGGTCCCTCGACCAGGG 125165 28 96.4 32 ...........................C CCTTCATGTGGGCCTGCACCACGTGCGTCCTC 125225 28 100.0 32 ............................ CTGCTCGGGCAGGCCAAGCTGGAGAACGCCGA 125285 28 100.0 32 ............................ GTCATCACCGTGACCTCGGTGGGCGAGGCCGG 125345 28 100.0 32 ............................ GGGAGGCGCGCGGCCTCGCTCTCCGGGAGGAC 125405 28 100.0 32 ............................ CGCCTGATCCGGCGCTCCGCCTTCTTCACGAG 125465 28 100.0 32 ............................ GCGATCAACTACCTCGGCCGGGAGCTGTACCT 125525 28 100.0 32 ............................ GGGTGGCACCGGGACGGCCGGGTTTGCAGGCC 125585 28 100.0 32 ............................ GTCCTGGCCGAGGACGCGGGTGAGGGCCTGCT 125645 28 100.0 32 ............................ ATCGTGCAGCGGAACCGCGAGGAGCTGGAGCG 125705 28 100.0 32 ............................ CCGGGCGCAGTCCGTCGCAACGCACACCCGTA 125765 28 100.0 32 ............................ ACCCGGTCGGCGCCCGCGTCGGTCCACTCCGG 125825 28 100.0 32 ............................ GATCGCGTCTTGAGCACCACATTCAGCCCCTC 125885 28 100.0 32 ............................ CACGCCGTCGCGACAGAGCAGTGGCGCTGGCA 125945 28 100.0 32 ............................ CTGCGCAGCACGAGGTATCCGCGTACGTCCGC 126005 28 100.0 32 ............................ AGGCGTTTCGTGTGAAGCAGACCGCCGCCGGA 126065 28 100.0 32 ............................ GACATCCTCGCGCTCGGCAAGGCGATCAATTA 126125 28 100.0 32 ............................ ACCTCGACCCCGACGACGAGGGCCCCATCGAC 126185 28 100.0 32 ............................ GCGATCAACTACCTCGGCCGGGAGCTGTACCT 126245 28 100.0 32 ............................ CTCCACCTGACAGGCTCAGCGACGAACCAGGC 126305 28 100.0 32 ............................ CCTGTGCCTGCACGTCGCCCTCAGCGCCGCCC 126365 28 100.0 32 ............................ GCGTCGAGGGCGGCCTGGTCGGTGGGGGTGGT 126425 28 100.0 35 ............................ GCGTCCACTGGGTCGTGTCCAGCGGCCTCTACACG 126488 28 100.0 32 ............................ ACCGACGCGCTCGGCGCCCTGCCCCTCGGCTC 126548 28 100.0 32 ............................ CCTCCGCACCGTCCCGTACGCCATGTCGTACG 126608 28 100.0 32 ............................ GCCAACTTCGAGCGCGGCCTTCCACCGCCGTT 126668 28 100.0 32 ............................ ACGCGGTCGGCCTCGATGCTCTCGGCCAGGAG 126728 28 96.4 0 ...........................T | ========== ====== ====== ====== ============================ =================================== ================== 36 28 99.7 32 GTCCGCCCCGCGCTGCGGGGGTGAGCCG # Left flank : GCTGCCACGCATCGTCGCCGACCTCCAAGACCTCCTCGACCCCCAGGACGGCCACAGCCGCCGCGACGACGCCGAAGAGGCCCTGGAGGAGATCACCGACCTGTGGGACCCAGAGCTCGGCGCCTTGCCCGGCGGCCGCAATTACAGCTCAAAGGGGAAGAACTGACGTGTCATCGATGATCGTCATCGCGACGACCGCCGTCCCCGAACACGTCCGCGGCGCCCTCACCCGCTGGATGATCGAACCGATGCCGGGCTTCTACATCGGCACACTCTCAGCGCGGGTCCGCGATGCCCTGTGGGACGTCGTCGCCGCCTCGGTGGCCGACGGCGCAGCGGTCATGGGATACCCAGCGGACACCGAACAGGGCTACGCAGTCCGAACCGCGGGCGAACGGCGGCGGAAGCCGCTAGATCTGGAGGGCCTGGTGTTGGTGGCGTTCCACCCGAGCGAACATAACGAATCGGCAACCTAGCGGAAACAGTACAGGTCAGGAAGT # Right flank : TTCTTCCAGTTCTGGGGTGGCTTGTTGATCTTGTGGCGCTGACGGTGCCAAGGTGCCGCCCGAACCCGACGCCCTCGACGCCTTCCGCCGCCAGCTAGCCGACCGCATCCGCGACCACCGCCTGTGGCGCAACCTCTCCCAAGAGCAGGTCGCCGAACGCACCGGCCTGTCGGCCCACACCGTGCAGCGCATCGAGAGCGGAACCCGGGAGACGAAGGTCAGCTACCTCTTCCGCCTCACCCACGCTCTCGACTGCGAGGTGCGCGACTTGCTGCCGTGAGCCCCCGGCCGGTCTTGCCTCCGGCCGGGGGCTGCGGCGTCCCGCCCTCGACGGGGGGCGTGGGGCGGGAGTTCGGGGCTACGGCTCGTAGCTGACGTAGGTCTCGCACGCAGTGCACGCGTACCGGTCGGCGACGCCGGCCATCAGGACGCCGCAGTTCGGGCACCTCATGTACGTGAGCCGCCGGAGAGTCGGGGGCTCCTCCGCGCTTTCGAGGGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGCTGCGGGGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCGCCCCGCGCTGCGGGGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 131523-132390 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG770540.1 Streptomyces sp. SPB074 supercont3.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 131523 28 100.0 32 ............................ GCCGCACGCACCCGAAAAGCTCGCGGAAAGTA 131583 28 100.0 32 ............................ ACGTACGAGGGTGTTACTTCATGCGGCCATAA 131643 28 100.0 32 ............................ GTGGTGAAGGCCGCCGGTACCGCGATCAGCAA 131703 28 100.0 32 ............................ CCGGACGAGGGCATGCCGACGCCAGCCTCTGA 131763 28 100.0 32 ............................ CTCGCGTCCCCGTACGGCAGCAAGTTCCCGGC 131823 28 100.0 32 ............................ TCTTCGCGCTCCTCAGCCGTGGTCTGAGGCCC 131883 28 89.3 32 AC.....................C.... GCGAAGCAGTTCGCCGAGACCGCGCACGCCAT 131943 28 92.9 32 AC.......................... TGGACCAAGGCATTTGAGGGTGGGGCAGAGGG 132003 28 92.9 32 AC.......................... CGGGCCGAGCAGGCCGAGCAGAGCCTCCTGCG 132063 28 92.9 32 AC.......................... ACACCCGGCGCGCGGAGAGGGCCGCCGCGCAG 132123 28 92.9 32 AC.......................... ACGCGGGGCGGCGAGGGCGAGCGGGTGACGGT AA [132129] 132185 28 92.9 32 AC.......................... TACCAGGAGGCCGACAGCGGGCAGCCGGCCGG 132245 28 96.4 32 A........................... CTCTCCCTCTCCCTCCCGTCGGTTCACCGGCT 132305 28 78.6 29 A...................AACC...C TTGGCGGCGAGCGTCATGGGCAGCCTCTG 132362 28 78.6 0 .C....T....A.C....C........A | G [132375] ========== ====== ====== ====== ============================ ================================ ================== 15 28 93.8 32 GTCCGCCCCGCGCTGCGGGGGTGAGCCG # Left flank : GTCACTCCTTGCGGTGGCGGCCCCGGCGCTTGGGCTTCCGGATGGCCTTTACGGCTGCGATCGCCGCGATCGCGTTGACCGCGAGGGTCGCGATCCCCACCGCGAGGGTGATGTCCCCACTGTTCACTTGTTCACCCCCTTCCTGCTGAGGTGCCCTCAGTTTAGGGGTACCCCTAATAGGCTGTCAAGGGGTACCCTTAAATCATGTCCGAGACCCCCGACGCCACCACCGCGATCCGCGAGATCATCGCCCAGCTCGCCACCATCCCCGACCTCGTCGACCGCGCCCGCGCCGTCAGCGCCGTCCTCGACGCAGTCCCCGACCTGCAACGCGAACTCCGCACCATGCGGCAAGATGCCGTCGTCGCGATCCGTGAGACGCGCACGCTCGCCGAGACAGCCGACCTCCTCGGCATCTCGCAGCCGCGCGTCTCGCAGATCACCAAGGGCGTCAGCCGCTCCACAAAGCACTGAGCCCCGCCCACCTGCTGGAGCAGGGG # Right flank : ATCACGGCCCCGGCTCCGCCCGCCCCCTTCCTCGTCCGCTCCGCACGTGCGGAATCCTCCCCGGTGCTCGCGGCGCGGCTCGTCGATGTCCCCTTCGACCTCGCCCACGCGAGGATCCTCCGCCGAACAGGGGTGATCTGCTCGATGAGCCCGTCGACCCAGCGCCCGCGGGGATACTCCGGTCCTCGCGCGGCTGGAGGCGGACGGTGTGCTGTCGACTCCGCGGAGGATCTTCCGGCCTTCATGGAGGAGCAGACCTACGGCTTCCGCTCCGCACGCGCGGAGGTGAGTCGGTTGCCAGGCGTCACCCATGTCGAGGCTCCGTGTCCGCTCCGCACGCGCGGAGGTGAGCCGCGGAACGCGCTCGCTCCCTACGCACGGAGGTCGTCCGCTCCGGGCCGGTCCCGTGCGGCACTTCCCGGGACGCAGGCGAAGGCCTCGCTCAGACGCTCCTCGTCGGATGCGGCGGGGGTGGGGAGGTGCTGTTCGCGCAGGTGGGT # Questionable array : NO Score: 5.58 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.63, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGCTGCGGGGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCGCCCCGCGCTGCGGGGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.10,-4.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-25.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 3044298-3043475 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG770539.1 Streptomyces sp. SPB074 supercont3.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3044297 29 100.0 32 ............................. GCGACTTCCACACAGCCTTGGGCGGTTTCGGA 3044236 29 100.0 32 ............................. GCGTCCGCTTCGACGACGAACGCGTCGAAGCC 3044175 29 100.0 32 ............................. CTGCCCGAAGACCCACATGGAACCGTCCGGGC 3044114 29 100.0 32 ............................. GCGCACGATGAGTGCATGGCGGCTGCCGGGGG 3044053 29 100.0 32 ............................. GATGGGGCGCGGACGCGGCGGATCGCGGGGGT 3043992 29 100.0 32 ............................. GCGGCGCTCGTGCCTTGAGAACTGAACAGAGA 3043931 29 100.0 32 ............................. ACACGTGGCCTGCGGGCTTCTTCCCAGGGGCT 3043870 29 100.0 32 ............................. TACCCCGAGCTGAACAACACGCTCCCCGAACG 3043809 29 100.0 32 ............................. TATGTAGAAACGGCCCTCGCGGCGGGCCGTCA 3043748 29 93.1 32 ...........G......A.......... GGCTGGCTCCAGCCCTTGCGCGGGGCGATCCG 3043687 29 96.6 32 ..........................T.. TTGAACTCGTACTCCGCTCCGTCGCGGTGTTC 3043626 29 89.7 32 ...C............G.........T.. CCGGTCTCGTGCACGCGGATGAGGAGTCTCAC 3043565 29 82.8 32 .CT...........T.A......C..... CGCAGAGGCGGTGCGTCCCCGTGTTCGCGGGC 3043504 29 86.2 0 TC.C...T..................... | G [3043482] ========== ====== ====== ====== ============================= ================================ ================== 14 29 96.3 32 GTCTGGCCCGTACGCGCAGGGGATGACCG # Left flank : GCCCCGGCCGGAGCGTCCGACAGAAGGCCGGCCTCAACAGGGCCATCCTCGACACCGCCATGGCGGAGACCCGCCGCCAGCTCACCTACAAGACTTCCTGGTACGGCTCCCAACTCGCGGTCCTGGACCGTTGGTGGCCCTCCAGCAAGACCTGCTCCGACTGCGGATGGCGAAACCCAAGCCTCACGCTGAACGAGCGGGTGTTCCACTGCGCCCACTGCGGCCTGGTGCTCGACCGCGACCTCAACGCGGCCCGCAACATCGAACGGCACACCGCGGCGCGACCCACGCCACAACAAGTCGCCTCCGGTAAGGGGGAGACTCAAAACGCCCGTGGAGAGTCCGTAAGACTTCCCCGCCCCCGGGCGGAGAAGCAGGACCCAGTGAAACGGGAAGACGCCCGGCCCAGCCCGGCGCCACCTCGGCGGAGCAATCCACCGACATCCCCTCCCACGTATAACGGACAAGCAAAGTCGTCCTGAACGTGCAGGCCAGAAAGG # Right flank : CAGCTAGCGGCTGGAGCCGGAGATCCGCCGCGCCAATTTCGAGGCCCGCGTCGGCGCCGCCCCGGACTGGACCTTCGCCGTTGAAGTTCAGGAGGGGCTGAGAGCGCTCGGGTTCGGCGGTGCTTTCGCCGCGCTGTACCTGGGGTTGCATCCGAGGGGTCCCGCCGGGGGCCGGCGGGCTCCGTGAGCGTGAAGCTGTCCTCAGGGGCGGGGTTGATGTTTGTGCAGTTTGCCGCGGTAGGTGCAGCCGGGGCAGGTGTCTTCGCCTTCGATGTGGCCCTCGTACCAGCCGTGGGCGGCGGCGTCGAGGATGGCTTCCTCGGCCGTGGCTTCGCCGTTGTGGAGGGCTTGGAGGGCCTTGGCGACAACGATGCGGAGCGCTGCGTTGTCGGGCGAGGGGAACGGCGGGGACGGCATGGGCGAGGGCGAGTCGGTCGGCATGGCGGCAGCCTACGTGCCGGGAGGGGGCCCGCCCTCGTCGTCGGGGGATGTGCCGAGGC # Questionable array : NO Score: 3.07 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGGCCCGTACGCGCAGGGGATGACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.20,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 2 3826465-3826798 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG770539.1 Streptomyces sp. SPB074 supercont3.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3826465 29 100.0 32 ............................. GTCAGCGTCCGCAACCGCTGAGAGGACCCGCC 3826526 29 100.0 32 ............................. ACCCACCACGAGCACGCGACGGGAAATCGGGC 3826587 29 100.0 32 ............................. TCCGGCGGCAGTACCTCGGCATCCGCCCCGTC 3826648 29 100.0 32 ............................. TTCTTCGCGACCTTGCCCTCCCTCGCGTACCA 3826709 29 96.6 32 ............................G GTATAGCTCCGCCCTTGTGGGCGCCGTAGGGT 3826770 29 96.6 0 ........................C.... | ========== ====== ====== ====== ============================= ================================ ================== 6 29 98.9 32 CCGCTCCCCGCGCGTGCGGGGATGGCCCC # Left flank : CGCCATGGAGGGGGCCGATCCGGCGCGAGCCGCGCTGCTCGCCGTGTGGCACGACTCGCAGGAGTCGCGGACCGGCGACGTGAACTATCTCGGCCGGAAGTACGCGGACCGGGCCGACCCGGAGGCCGTCACGGCGGACCAGGTGGCGGGGCTGCCGGAAGCGGTGGCCGAGAGCGTGCGGGGTGTGGTCGCGGAGTTCGAAGGGCAGGGATCGGCGGAGGCTGTGTGCGCCAGGGATGCCGACAAGCTGGAGTGCCTCGTGCAGGGCGTCGAGTACCGAGCGCGGGGCTACGCGGACGCGCAACGGTGGATCGACAACTCGTACGGGCGCCTCACGACTGCCTCGGGGCGAGCGCTCGCCGACGCGGTGCTGCGGACGGGGTCGCTGGACTGGTTGCGGGAGGCGGTGGGGGAGGGGTGAGGGAAAGTCGTAATCGCCGGAGGCGGTGCTTCTTGCGGAAACCCCACCGGGCGATAGCCAAACTCGCTGGTCAACGAGA # Right flank : CCCCGGGGCGCCCCGTCGAGGTGCACCCTGATGCCTGCCCCCCCCCGGCGGGGCCCCGGCCCCTCTCCCCAATAGCCCTGGTTCACCCGGCCGCCCGCAACATTCCTGTTTCCTCACACCGCGCCCGGTCCCACGGGCGCCGCACACCACGGGGGAACCATGATCGAGGCCGTCGGTGTCGGGGGGCAGGTGTCCTTCGACGGGCAGTACGTGACCATCACTCGCAGGGGCTTCCTCGCGCGCGCCACGGTCGGCAAGGGGGAGAAGCGGATTCCGCTCTCGCAGATCTCCGCCATCCAGTGGAAGCGCCCCGGGCCGCTCGTCAACGGGTTCATCCAGTTCACCGTGCCCGGCGGCGTCGAGGCGCGGTCCAGCTTCGGCAGCCAGACGTCGAGCGCCTCGCGCGACGAGAACAGCGTCACGTTCGACAAGAAGCGCATTCCCGAGTTCGAAGCACTCCGCGAGGCCGTCGAGGGTGCCATCGCCGCCCTGCGGCAGCC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGCTCCCCGCGCGTGCGGGGATGGCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGCCCC with 89% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [38.3-13.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 3863535-3864845 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG770539.1 Streptomyces sp. SPB074 supercont3.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 3863535 30 96.7 31 .............................A CGCGCGTCGGCAGTTCGCCGGTGCACTCACG 3863596 30 96.7 31 .............................G CCGCGGACCGCATGAAGCGGCTTGCCGAACG 3863657 30 100.0 31 .............................. GCCCGGCGTCCTCACCCATCTCCGCAGGGCC 3863718 30 100.0 31 .............................. CGCTCACGGGGTGCCGACGCGACCTGCGGCG 3863779 30 96.7 31 .............................C ACCACCGGAATCCCGCGCCCCCCCACCATTC 3863840 30 96.7 31 .............................A CCCCCACCCGGCGCCTCCCGAGTCGCCTCCC 3863901 30 96.7 31 .............................G CGGGAGCGAGATCCTTTGCGTTCCAGCCGGA 3863962 30 100.0 31 .............................. ACGGCGAGGACGCCGAAGAGGTCCGCTCGTG 3864023 30 100.0 31 .............................. CTTCGCGCTCGTCGCCGTTCACGGCCCCGGA 3864084 30 96.7 31 .............................C CGTCCGTGCGGTCCGAGGCGATCCAGCCCTG 3864145 30 100.0 31 .............................. CCTCTGGGGCGCGCCTTGTGGGCTCGCCTTG 3864206 30 93.3 31 ............................AC AGGTTGACGGTGTCTCGGGTAAGCGTCAACT 3864267 30 96.7 31 .............................A AGCGGCACTGCGCCTGGGCGACCTCACCCCG 3864328 30 96.7 31 .............................G ACGACCCCCAGCTGCACGTCCACGCGGCCGT 3864389 30 96.7 31 .............................C GCTCCGCATCTCCCGCAGACCGCCCCTTGGT 3864450 30 96.7 31 .............................G GCGGCGCGAGCAGGCGCGGGAGGACAAGCGC 3864511 30 100.0 31 .............................. CGCCGATCAGTTGATGGGCCTCCTCGGCGAC 3864572 30 93.3 31 ............................AA GCACGCGCCGTGCCGCGCGGCCTCCTGGGTC 3864633 30 96.7 31 ............................T. TGGAGGTGACCCTTACTCGAACAAGCTAATG 3864694 30 96.7 31 .............................A TGGCGGCCTCGCGGGTCCGGCCGTACTGCGT 3864755 30 96.7 31 .............................G TGCCCTGGAGCCTCAGGGCGCGCACGGTCGG 3864816 30 96.7 0 .............................G | ========== ====== ====== ====== ============================== =============================== ================== 22 30 97.3 31 CTGCTCCCCGCGCGTGCGGGGATGGACCCT # Left flank : AACGCCCTGGAGCGGGCGGATGAACCGGTGGGCAAGGCGCGGGCGGACCTGGAGTTCCACGAGGCCATCGCGGTGGCGGCGGGGAACCCCGTACTGCGGATCATGCTTTCGTCCATCAGCGGGATGATGTTCGAGATGATGCTGCGGTCGAACTCGGACCCGAGCATCGCCGAGCCGGGTGTCCCGCACCATCCCGAGATCTTCGAGGCCATCGAACGCCGTGACGCGGAGCTGGCGGTGGAACGGATGCGGGCGCACTTGCGGTTGGGGCTGCGGACGTACGGGCGGGATCTGGACGTGCAGGTGGACGTGATGGCGAAGCAGCACATCGAGATGTTGCTGGGAGAGGGGAGGCGGTGAGCGGCTGGGGTGGGGGCGCCGGAGCGCTGGGGCGGGGAGGGGGTCTGCTGCGAAGGGCAGGGCTTTTGTCGTATATGACCGAATCGGAACTCCTTGCACGAAAGCCCATCGGCGGACACTGAAACCGCAGATCAGCGAGA # Right flank : GGCCCAAGGGCTACTGCTCGCCCCGCCCCCGACGTTTGTCCCCGCGCGCGGGCCGGACCCGGGCCGGCCCCTCCTCGCTCGTGCGGAGGCCCCCGCTCCCCTCCCACCGTGCGGCTCGCCCCCTCCTCGTGTGCTCCCGTCAATCCCGTCCGTCCCCTACCCCCCATCCGCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGC # Questionable array : NO Score: 5.50 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.38, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGATGGACCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //