Array 1 12351-10995 **** Predicted by CRISPRDetect 2.4 *** >NZ_OAFK01000055.1 Neisseria meningitidis strain Neisseria meningitidis isolate 22532, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 12350 36 94.4 30 ........G...A....................... GCGGAACGGGTTGACAGACTGAATTTGAGT 12284 36 97.2 30 ............A....................... AATCAGACCGACTTTACAACGAAGGTTTGA 12218 36 100.0 30 .................................... TTGGGAGGTGGAAAACCGAATCCTGCACGA 12152 36 100.0 30 .................................... AAGCAAATCATTTTCATAGTCAGCAGCTTC 12086 36 97.2 30 ......................T............. ACGTGAGTTTGTCTATGAGTTCGACGGCGT 12020 36 100.0 30 .................................... TGCTACCAGCGACAACAGGCATTACGCCCA 11954 36 100.0 30 .................................... CCGACCGTGGGAACGACGGTATAGTGGATT 11888 36 100.0 30 .................................... TAAAAAGATACTCATTCTGCCTCCGTATTA 11822 36 100.0 30 .................................... AACGGCAACCCACTAAATTTTGCAAATGCG 11756 36 100.0 30 .................................... TAACGATTGAAAATGAGTACGCATTAAGTA 11690 36 100.0 30 .................................... TCTATCTTAATTTCTCTTTGTTCTTCTTTA 11624 36 100.0 30 .................................... CATTGCGCCCATTTTGTCTATCCGAACAAT 11558 36 100.0 30 .................................... ACCACCGCCGCTTATATAGAAAAGCTGTAA 11492 36 100.0 30 .................................... AAAAAAGTTGCGGGATAAGTTACAGTTTGA 11426 36 100.0 30 .................................... TAATTGATTTTTAAGGTTAATCAGTTTTTG 11360 36 100.0 30 .................................... CTATTTTCCTGCACCTACAACCCCCGAACG 11294 36 100.0 30 .................................... CTTTCTGTGCGATGTATTGAAAAAGCTGAG 11228 36 100.0 30 .................................... ATGCTGGATACGGCATTGATGCTGCAACTT 11162 36 100.0 30 .................................... TTGCAATCCAAGGCTTCAAAATGGCTTGGA 11096 36 100.0 30 .................................... CGCCTGACCTAATATAACCATATGGAAAAA 11030 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 21 36 99.5 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAGCGGTTGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGCTGGAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //