Array 1 68471-70138 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNSX010000007.1 Lactobacillus delbrueckii subsp. bulgaricus strain FAM 22166 FAM22166-i1-1_scf7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================================================================================================================================== ================== 68471 36 100.0 30 .................................... GTTGCCACCGCATTTTCTGGCTTTTTGTAG 68537 36 100.0 30 .................................... GTAAGTTTACTTTGGTTGATGCAGCTAATG 68603 36 100.0 30 .................................... AACTGACAGCAGTGTAGACCGAATTCGTGA 68669 36 100.0 30 .................................... GGCTTTTGCCTTGCACGACTTTTGCCTGCA 68735 36 100.0 30 .................................... CGTGTCGTCGTCAGATAATCTACATCCTGT 68801 36 100.0 30 .................................... CAGACTCATTGTCAAGACCTTACAGAAGTT 68867 36 100.0 30 .................................... ATTTGTCAAGGAGTACGGCTGGCGGATTGA 68933 36 100.0 30 .................................... ATACATACCGGCCCTTTGCGCCGTCAACAT 68999 36 100.0 30 .................................... GCTGCCATGGCGTCAATCGGCCGGGTGTTA 69065 36 100.0 30 .................................... CACTTGCCTCCCCTTTTTAAGCCAGCCCCT 69131 36 100.0 30 .................................... ATTTAATAACGCCTGTAATCTTGCCCTCTT 69197 36 100.0 30 .................................... AGGAAGCGCAGAAGTCTGTTGATCGTTCTA 69263 36 100.0 30 .................................... AAGCTGACGCCAGTGTCAAGCTTAATGAGA 69329 36 100.0 30 .................................... GTATATCTGGCGCTGATAGTCACAGTAGTC 69395 36 100.0 30 .................................... TGCCGGCAGTTGACCAAGCCTTATAAGGTA 69461 36 100.0 30 .................................... AATAACTGTGTGATTTTAATCGGAAGACTG 69527 36 100.0 30 .................................... CATATCCGTGCGCTCAGCCTCATGGACAGC 69593 36 100.0 30 .................................... CAAATTTAAGCCAAATGCTGATACCAGCAC 69659 36 100.0 30 .................................... CCGTTTTCCGTCACATGATACTCCGGCATC 69725 36 100.0 30 .................................... ATATGGATTCAATTTGAACACTCAAACATT 69791 36 100.0 31 .................................... ACAAATATCGCGGTTTTGATCGGTCGTCCGA 69858 36 97.2 30 ......................G............. CAACCGACATCACTGTTGCTCAAGGCGCAG 69924 36 97.2 143 ...................................G CTGCTTGGATGCGTGGATTGAAATAGTTTTATAGGGGTGCTTATTCAATGTTGTCAATTTTCCCGACGTATGTTGGGGTGGCCATCATAATGGCCTAATACTAAGACGACAATTCTGCTCATTCCACGTAGGTGGGGGTGATC 70103 36 75.0 0 ..........A..........C...G..GAC..AAG | ========== ====== ====== ====== ==================================== =============================================================================================================================================== ================== 24 36 98.7 35 GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC # Left flank : CAGTGAATCTTTACTTCAAAAGTACATGACCAAATTAACTAGTTATGTAGTTGATGAGCTAAGCGCAGATGGCAGAAACAGAATCATTACCTTCTATCGCGATTTACTAAATGCTGTTCAAGACGAGTTGCTTATGGAAGATTTGCCGCTTGAAATAAGTTTTGACACAGACTTGAAGAAACTCTTCAAATTTGGTGGTCTACACTTTAACAAGACACTCACTCACGATCCATATGGTATAATCGAGACAGTACTTAGGATACATGACAGGTTAGATCTTAAGTCTACTGTTGTTTTTAGTAATGTAGCTCATTACTTAGATGTAGAACAGTTTATAGAAATATCTAAGCTGTGCTTAGAGCTAAAAAAGTCTATCATTTTTATCGAGTTTTGTAGCCATAAGGATCAGGTTGTATATGGTGATGCAAAATTCAGTTATATCGATGAGGATCTTGTTGATTGGTACTAGCCTTATATTAAAGCTGTGTTAAAAAATAACG # Right flank : GTGCTTTTCGTGATTGAGAAGCACTTTTTCCTTTTGAACACAACAACTTAAAAAAACGTTAAATCAAACGCTTCACCAAGCAAGCAGGAAAAGATTATAGTAAAATACACTGGTTATAAAAAAGCTGAGCCAAGCTCAGCATCCCCAAAACAAAACTTAGTTAAGGAGAATAAACACATGCAAGATATTTATATTGTTGCGGCCAAGCGAACTCCATTTGGCCGTTACCACAAGCAATTGGCTGACTTTTCTGCTATCGACCTGGGCCAAATCGCCCTGCGCGGCGCATTAAAAGAAGCCGGCCTTGACGCCGAAGACCTGGATGCCCTCTTCATGGGCAATGTCCTGTCTGCCGGCTTAGGCCAAAACATGGCCCGGCAAATTGCTTTAAACGCCGGGATGCGGCAGGACTCAGTCGCCGTGTCCATCAACGAAGTCTGCGGCTCCAGCCTCAAGGCTGCCCGGCTGGCTGAAGCCCAAATGTTAATCGGTGACCTGGG # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.42, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAAGGTTGTCTATTCAATAAGGTTTAACCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //