Array 1 598-1557 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JWMS01000059.1 Neisseria meningitidis strain Nm130933 Scaffold59, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
       598	    36	  94.4	    30	........G...A.......................	GCGGAACGGGTTGACAGACTGAATTTGAGT	
       664	    36	  97.2	    30	............A.......................	ATCACTTTTAAAGGCGGCATCGGCTGGTTT	
       730	    36	 100.0	    30	....................................	AGGGGTCGTGAATGGAGTTCTTGCAGTTCG	
       796	    36	 100.0	    30	....................................	TAAGCGTTTCTTTTTTGGTCTGCTTCTGCT	
       862	    36	 100.0	    30	....................................	AATCAGACCGACTTTACAACGAAGGTTTGA	
       928	    36	 100.0	    30	....................................	CGACAACAAAGCCGTCTATGACCTGACCGA	
       994	    36	 100.0	    30	....................................	CACCCTGATATTCCGCAACTCGATATACTG	
      1060	    36	 100.0	    30	....................................	TTGGGAGGTGGAAAACCGAATCCTGCACGA	
      1126	    36	 100.0	    30	....................................	AAGCAAATCATTTTCATAGTCAGCAGCTTC	
      1192	    36	 100.0	    30	....................................	TGTAAATGAGGTTATTGAAGATGCAAAAAG	
      1258	    36	 100.0	    30	....................................	TTTTCCAAAGCGTAAAATCACATTCGGGGC	
      1324	    36	 100.0	    30	....................................	AACACTGATAGGGAATGTACCCTCGATAGT	
      1390	    36	 100.0	    30	....................................	GCGGGAACTGCAGCATTGTTGTTTGGTGGA	
      1456	    36	 100.0	    30	....................................	CGATGAATGTTTTGGCAGCAGACAGGTTCT	
      1522	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        15	    36	  99.4	    30	GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	                              	       

# Left flank :   GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGGGCGGGTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG
# Right flank :  TAGCAATTCTGATTATTCTAGGGCGTGTCCTCAATTTAACTTAGCATGAATAATAGAGCAAGCCAAGTAAAGCATCGATTT

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         F [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.40,-0.90] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [3-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.68   Confidence: HIGH] 

# Array family : NA
//