Array 1 27184-30532 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVMQ01000028.1 Dysgonomonas sp. 511 scaffold28_size34426, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 27184 47 100.0 30 ............................................... GAGTATTGGCATTCATCCGGGTACTGTCAA 27261 47 100.0 30 ............................................... GATATGGCGTTCGTAGGGTGTAGTAGGATG 27338 47 100.0 30 ............................................... TAAGAGTAAAAGATGTACAGTTATACTACA 27415 47 100.0 29 ............................................... GGGTCGTAAGCAAGGAACTCGTCTAAAAG 27491 47 100.0 31 ............................................... TTCACTTCGTAGCCTAATTTTGCAATTGCAG 27569 47 100.0 30 ............................................... AGACTGCCCAAGCTTCACATAGCCCAACCC 27646 47 100.0 30 ............................................... AAGGGCACGAAGGTTATAAACGGGCACGGT 27723 47 100.0 29 ............................................... CCATGCTGGAACTTGCCAATCTGGTATTG 27799 47 100.0 29 ............................................... AGTGTCTTAGAGGTCTTTATTTTAGTTTC 27875 47 100.0 29 ............................................... ACTATGGTTAATGCTCCCGATATATCTGT 27951 47 100.0 29 ............................................... CCAGAACCGAACAATCCCATATCCTTATC 28027 47 100.0 30 ............................................... TTCATTGTAAAAGCACCTGATAGCAAGACA 28104 47 100.0 30 ............................................... TTGGTTCTTCTGAAGGAAAAAAGAGAGGAA 28181 47 100.0 30 ............................................... TATCGGAGGAGTGGTAATATTTTCTATTCC 28258 47 100.0 30 ............................................... GATTTGGATATTGTGACAACCATCCAAGGA 28335 47 100.0 30 ............................................... TTTTTGATGTATGTATTATTTTTATAATCT 28412 47 100.0 29 ............................................... AAACCATCGACTGCTTGCAAACCGATTGC 28488 47 100.0 29 ............................................... CTTAATCTCTTTCTTAAACGTAACTGCAT 28564 47 100.0 30 ............................................... TTGGGACAACAATTCGTCTGGTAGAAATTA 28641 47 100.0 30 ............................................... CTAAATTTGTTGCGGCATTGCCGCAACAAA 28718 47 100.0 29 ............................................... GAAGGCTCACTAGGAACGATAATAATAAT 28794 47 100.0 30 ............................................... CCTCTGATCAGATTGATCCTTCGTATTTAT 28871 47 100.0 30 ............................................... CTTTCGTTATTTTTAATTAAACTACTCTGT 28948 47 100.0 29 ............................................... TACGACTCGCCATTCAAGCCACCGCCTGC 29024 47 100.0 30 ............................................... GATACAATGCCAATTGAACTTACGGAACAA 29101 47 100.0 29 ............................................... TATAGGTGCAGGGATATGTTTAATATTCT 29177 47 100.0 30 ............................................... AGATATTTTCATCTATCTTTGTAGTATGGA 29254 47 100.0 30 ............................................... TAGGTTGTTTAAATCCCATGAGACATATTT 29331 47 100.0 30 ............................................... AAACAATCAACGATTGTGTTGAAGCACTCA 29408 47 100.0 30 ............................................... GGCGCTGCAGTTGTCCTCTAAATGTAACTT 29485 47 100.0 30 ............................................... GTCTTGCAGATATTTTTCTCCTTGCTTTAA 29562 47 100.0 30 ............................................... GCATTCATTTTGTTTGCTTGCGCTTTGTTC 29639 47 100.0 31 ............................................... TTCGGGGGTTCCGCTTTCATTAATTCCGCCT 29717 47 100.0 30 ............................................... TCAATCGGTTCTTTATTCGTAACGATTCTT 29794 47 100.0 30 ............................................... AAACAATTAGGATTTAAAAAGATGCTTATT 29871 47 100.0 30 ............................................... TATTACTCCAAGTGCCTAGCCGTAAGGCCA 29948 47 100.0 30 ............................................... GAAATACCGCAGGCAATCCCAACACGCCAA 30025 47 100.0 30 ............................................... TCATCATACATATATGCTTGGTGTATATAT 30102 47 100.0 30 ............................................... AAAATCATTCGCCGCCTTCATGCGTTCGTC 30179 47 100.0 29 ............................................... ATAGAAGCAAGTTTGTTACATTTCTTAAC 30255 47 100.0 30 ............................................... GCGAGTTTGCATCAATGTTGTTTGCTCCTA 30332 47 100.0 30 ............................................... AAGAACTCTTTGCCTGCTAGCGCACTCTCT 30409 47 100.0 30 ............................................... TATTCCTTACATAAGGGCTTAACAGCTTCC 30486 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== =============================== ================== 44 47 100.0 30 ACTGTATTTCAATGAACTAAGATACAAAATTGAAAGCTTATCACAAC # Left flank : AGGTAAATTGCGAAAAATAAAATATCCTGAATTTGTATTATAAGATTATGCTATGCAGCAGGACAGATTAAATCAATATCGAATTATGTGGGTTTTAGTACTGTTCGATCTTCCTACCGAAACCAAAAAAGACAGGAAGGTATATGCAGATTTTCGTAAAAATCTGCAAAGGGATGGATTTACCATGTTTCAATTTTCAATCTATCTACGTCATTGTATGAGTATGGAAAATGCAAATGTCCATATCAAACGAGTTAAAAAGTTTCTACCAGAAAAGGGGCATGTTGGGATAATGTGCATAACAGATAAACAGTTTGGGATGATGGAGTTGTTTTATGGGAAAAGTGCGGAGGCTAAGAAAACGGAAGGGCAACAACTAGAACTCTTTTAAGAATAAAAAATCCCGACTATAATCGGGATTTTTATTTGAAATACATCATTTTTTGAAATCTTAATGAGTTGTGATAGTTGTTGATATACAGCTGGTTGTATATACCTAT # Right flank : CATATTCTTCGCAGATGTAATAAGTTCAGTGACTGTATTTCAATGAACNNNNNNNNNNNNNNNTGAAAGCTTATCACAACATATTCTTCGCAGATGTAATAAGTTCAGTGACTGTATTTCAATGAACTAAGATACAAAATTGAAAGCTTATCACAACTACAGTAGTGGAAGGATTGCGGACAACTAAACTGTATTTCAATGAACTAAGATACAAAATTGAAAGCTTATCACAACCTTGTAATAGCTGGTATTGCAGGAACGGTAACTGTATTTCAATGAACTAAGATACAAAATTGAAAGCTTATCACAACGTAAAAATTCTGACTGTCTGCACATTATACACTGTATTTCAATGAACTAAGATACAAAATTGAAAGCTTATCACAACTAACAGTTTGTTATATTCATCTTCCGATTCACTGTATTTCAATGAACTAAGATACAAAATTGAAAGCTTATCACAACAAATACCAATGAAAAAAATAACGGACATAACTGTA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACTGTATTTCAATGAACTAAGATACAAAATTGAAAGCTTATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.34%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.20,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 2 30642-32380 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVMQ01000028.1 Dysgonomonas sp. 511 scaffold28_size34426, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 30642 47 100.0 30 ............................................... TACAGTAGTGGAAGGATTGCGGACAACTAA 30719 47 100.0 30 ............................................... CTTGTAATAGCTGGTATTGCAGGAACGGTA 30796 47 100.0 30 ............................................... GTAAAAATTCTGACTGTCTGCACATTATAC 30873 47 100.0 30 ............................................... TAACAGTTTGTTATATTCATCTTCCGATTC 30950 47 100.0 29 ............................................... AAATACCAATGAAAAAAATAACGGACATA 31026 47 100.0 29 ............................................... AGGTAAACCGCTATCGTTAATTCCGCCTA 31102 47 100.0 30 ............................................... AACATACAACAGGCTTTAAAATAAATCAGA 31179 47 100.0 30 ............................................... AGTAGCATAGTTGGGAATATTATAGTATAG 31256 47 100.0 30 ............................................... GGACTGGCAATACTAATTCTTTGTATTGAT 31333 47 100.0 30 ............................................... AGAATACTCTGTGAGGGTTAATATTGTATC 31410 47 100.0 30 ............................................... ATCCGCAAAAGTCTTGATAATACCCTTTTC 31487 47 100.0 30 ............................................... TATTATCTAATGTGAAACATAAATTTTCAA 31564 47 100.0 30 ............................................... TATAAGTTTCTTATTAATTTGGAGATCTTT 31641 47 100.0 30 ............................................... TAATTGTTCTAATTTACCAAGATGTTCTAT 31718 47 100.0 30 ............................................... CAATCAGGTATAGTTACAACCCCAATAATT 31795 47 100.0 30 ............................................... CCCATCACCAGAAAGGTTAATTTCATCTGA 31872 47 100.0 30 ............................................... CAAAACGATATGGGAAATGGAAGAGTGGAA 31949 47 100.0 30 ............................................... GGAGGTAAATTTGTTGCCTCATTTGCAGCG 32026 47 100.0 30 ............................................... ATGCCCAATTCTAATCCTATACGCGCATTA 32103 47 100.0 30 ............................................... CCAGTTCATACTTAAGCATCGGCTTAGTGA 32180 47 100.0 30 ............................................... AGTATGGCATGAGTGACGAATGCTGCGATG 32257 47 100.0 30 ............................................... TTAGTTAATGTTTTAAATTCCAAAAAAGAT 32334 47 91.5 0 ........................................AA.A..T | ========== ====== ====== ====== =============================================== ============================== ================== 23 47 99.6 30 ACTGTATTTCAATGAACTAAGATACAAAATTGAAAGCTTATCACAAC # Left flank : TCACAACAAAATCATTCGCCGCCTTCATGCGTTCGTCACTGTATTTCAATGAACTAAGATACAAAATTGAAAGCTTATCACAACATAGAAGCAAGTTTGTTACATTTCTTAACACTGTATTTCAATGAACTAAGATACAAAATTGAAAGCTTATCACAACGCGAGTTTGCATCAATGTTGTTTGCTCCTAACTGTATTTCAATGAACTAAGATACAAAATTGAAAGCTTATCACAACAAGAACTCTTTGCCTGCTAGCGCACTCTCTACTGTATTTCAATGAACTAAGATACAAAATTGAAAGCTTATCACAACTATTCCTTACATAAGGGCTTAACAGCTTCCACTGTATTTCAATGAACTAAGATACAAAATTGAAAGCTTATCACAACATATTCTTCGCAGATGTAATAAGTTCAGTGACTGTATTTCAATGAACNNNNNNNNNNNNNNNTGAAAGCTTATCACAACATATTCTTCGCAGATGTAATAAGTTCAGTG # Right flank : TCGGATCACTGCCGCGTATCTGACCCGCCTATAAGGCTACAAAACAGCGAAAACCGTTTGTAGTAAACGGTTTTCGCTGATATTAGTTGCGGAAGCCGGATTCGAACCGACGACCTCCAGGTTATGAGCCTGGCGAGCTACCACTGCTCCATCCCGCGATATTGTGAGTGCAAAAGTATGCAATTTATATATACCAACCAAATAAAAAAGCATTAATAAATTGAGAATAATTGTAAGTGGCTGTTTTATAGGAAGAAAAAACTGTTGATCTAATGCATACTTGAAAGCCGAACTTTTCAATAATGATGTTGTAAAAGAACTATCCCCACTATTTGACAAAAATCTAAAAGACTATTATATCAGAAAACTACAGGATGATAAAGATCGCTTTCTTGTCATTAACAATGTTCGCAATAAACTCATACACATTCTGTTTACTGTTATTAAAAACAAACAAATCATTTACAATGAGAACAAACGCTGTGCATTAGAAGTAGACA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACTGTATTTCAATGAACTAAGATACAAAATTGAAAGCTTATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.34%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.20,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 3763-4620 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVMQ01000048.1 Dysgonomonas sp. 511 scaffold48_size10801, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ===================================== ================== 3763 35 100.0 35 ................................... ATTAATCATTTCAGACGGTTTGTAGGTGTGAAAAT 3833 35 100.0 34 ................................... TTCATTTTCTCATTTTTTGATGTTGGTAAATTTA 3902 35 100.0 33 ................................... ACAGGTACGTTATTCACCAGTGTTATGGTGGCA 3970 35 100.0 37 ................................... TTCCTTATCATACTTAAATTCGGCTTCATCTAAGGTA 4042 35 100.0 31 ................................... ATCCCATTCAGAGATGAATCCTTTTATTGTA 4108 35 100.0 33 ................................... CAAAAGTACCAGAACTTGAAGTGGTAGTTTTAC 4176 35 100.0 32 ................................... CCAAGACGAGTTGAAAGGAACTTTTTCTCCGT 4243 35 100.0 34 ................................... TGTTTAGTTCGAAGTCTGCTCCCACAGTCTTCAT 4312 35 100.0 34 ................................... AGTACAGTACTTATGAGTTCCCCAAAAGAAACCC 4381 35 100.0 33 ................................... TATTTTTTTTCATGGCTTAGGCTGCCATTCCAA 4449 35 100.0 33 ................................... AAAAAATGTTGATATTAGTCCCCAAAAGAAAGA 4517 35 100.0 34 ................................... AATTTTCTTCTTAACTTTTTAGCTTCTTGCTTAA 4586 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ===================================== ================== 13 35 100.0 34 GTTGTAGAAGCTCTCACTTTGGAGGGTATGACAAC # Left flank : GTGTATCAACCTGACAGGAGGAAATCTATCCGCACAGTAAAAATAATATGAAAACATTTGCGAAAAAAGTAAAAACGCATAAGTCTTTATTTTTTAAATACTTATGCGCTTTTAGGCATTTTCCATATAAGAAAAAAAATTCGCAAACCTCAGTTATTACAAATTATTCAATACATTTGCGAAAAATCCTGTTTTTTGAAATTTTACTTTTTCGCGTATTTCCTTCATTGCCAATGAATTGATGTTTTGAATAAAGTGGGTGTTTTCGAAAATATCCCATTTAAGAGCAGAAGCTAAAAGATTTGCGAATATTTCGAGGAGAGTAAAATACTCAAATACAGCACCTTAATGAAATAAAAATTAAAAAAACGTATTTTCTAGATAGAAAAATAGAGAACATTTGCGAAAATTCCTAAATGTGATGATGAGACATTCTTTCTCAGGAAGATTGGAATTGTAAATATAAACTTGATAAAATGTAGTCCTCTGAAAAACTGAAT # Right flank : CGAGATGTGAAGGCGTGATCCGCTACCCGCAAACGGTTACAGAAGCTTTTATTTTGAGAAGTATTGTAACAGGAAGAGTATGGGCATAAAAAAACAGCCTGATCTGTGTTCAGATCAGGCTGTTAATGTTTATTTTAAAATTAAATCCTATTTCTTTTTTGCTTTATATATTAAATATCCAGAGAATACTATGGTGAATACAGCTAATAGTGACAATAGAATATCTATATAATACTTATAATCGTTATAAAATATAGAAAGGCACTCTACTTCAACATTCACACCTGAAAATACAACGATAGCAAAAAAGACTTGAGCTATATATATGTATACTAACCTGTCTGAAAGGTCTCTGCTTCTCTTAGCTTCATTTTTTTCAATTTCCTCTTGCTGTTTCAGTTCCTTATTCCTTATTTCCAATTCCTGTTCCTTTATAGCCAGCTCTTGTTCCTTAATTACGATATCCAGATCCTCTATCTTATCCCTTACTTCATCAAAAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGAAGCTCTCACTTTGGAGGGTATGACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.10,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA //