Array 1 303982-304620 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFTA01000002.1 Anaerococcus octavius strain NCTC9810, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 303982 32 100.0 37 ................................ TGATGATGAGGTTAGAAACTTTGACAACATAAGGCAA 304051 32 100.0 35 ................................ TTTATTTGCTATTGTTAACTCACTATTAGCAGGGC 304118 32 100.0 36 ................................ ATATTTACGCTTTTGTTGCCTATTCATATCAAATCG 304186 32 100.0 34 ................................ ATAAAAAGTGTGATAAAAGAGTTGTACAGAGTGT 304252 32 100.0 36 ................................ ACTAATATCATCTTTAGTTAGTAAGTTTTTAGGCTC 304320 32 100.0 36 ................................ TAGGTCTAATTTTTGTAGGCTTACGTATAAAATCAC 304388 32 100.0 35 ................................ AGATTTGATAGAGAGCAAGGTGTCATCTGTATCTA 304455 32 100.0 36 ................................ TACATTTTGTCGCATCTCTTCTTGGCCACCTACAAG 304523 32 100.0 34 ................................ TCCAGAGGATAAGTTGTTTATGTTGTATCTGTTA 304589 32 96.9 0 ...........................A.... | ========== ====== ====== ====== ================================ ===================================== ================== 10 32 99.7 36 GTCACCTCCTATACGGAGGTGTGGATTGAAAT # Left flank : CATGTGCAAGCTATGCTTTTAAATAGGTATATAAGAGGAGATTTAGAAGCTTATCCACCATTTCTGATGAAAGGTTAATTATTATGATGGTGTTGATCACTTATGATGTAAATACAAAGTCGGAATTAGGTACTAAAAGACTAAGGAAAGTAGCAAAACAGTGCGTCAATTATGGCCAAAGAGTTCAAAATTCTGTATTTGAATGTTCACTTACACCTGCTCAATTAGTTAATTTAAAAAAGAAACTATTAGATATAATAGATGAAGAAAATGATAGTATTAGATTTTATAATTTAGGGAAAAATTGGCAAAATAGGGTAGAAACCATAGGAAAAGATGACAGTTACGATCCCGATAAAGACCTGCTTATAATCTAGACGACCCCAATCACCCATAAAATACCGGAGCACTCGCGCTATATATGACCATAATATGATGGATTTTATGAGTTTTCGTATTTTTTTCTAATAAAATTCATACAAAAACCTCTAAAAAATGCG # Right flank : TATTTATCCTATCAACCAAAGTTACATAAGCCCTTTGTCACCTCCCATACGAACCATCACTATTTGATTTTTATGACCAATTAAATAAAAATTATAAATCTTTATATCTTCTTAACCAAACTCGGAGTATGATATACTTATAAATTAATACTTATATTTTATAGAAAGGGATGGTTTTATGTCTGATAGACGTGAAAATAAAAATGGTTCTATGTCTTCTTTTGCTTCTGCTTTGATAGGAGCGATCATTGGGGGACTTTTGGTGTTTTTACTTACTAATGGCTTTGGGGCTAAGAAAAATAGTTCAAAGGATCCTGATCCGGTAGAAACTCCTAAAACCGAAGAAAAAGCTGATAATAATGAAAATGATTCTTCTAAAAAGAAGATTAGTAAGAATATTGGTAACCTTGATTCTGATGATACTAGTATATCTATGGAATCTAAGGTTGTTAAAAAATCTATTGATAGTGTAGTTGGTATTACTACAAAAGCTGAGGTTA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCTCCTATACGGAGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCACCTCCTACACGGAGGTGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //