Array 1 13886-15714 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPDK01000020.1 Acidibacillus sulfuroxidans strain Y002 contig20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 13886 30 100.0 36 .............................. AGTGTTTCTGGCGCTCCCGCTTCTTCGAGCGTCGCG 13952 30 100.0 37 .............................. ATACCAGAGCACCCAATAATAATCTGCGTATTCCTTC 14019 30 100.0 37 .............................. ATACTACCTCGACGGTGGTCGACAATACGCAGACAGC 14086 30 100.0 35 .............................. TAGTATCTGATAGTCCTGGTGCATGCCATAGCAAG 14151 30 100.0 36 .............................. CACCCCTCGACGCTGAGACTGCTGGTCTAGCCGCTG 14217 30 100.0 36 .............................. ATAGAAAAAGAAGGATGCTAAACCCCACTCCGATAA 14283 30 100.0 36 .............................. GAAAAGTCGAAAATGGAGCGGGAGACTGTATATATG 14349 30 100.0 36 .............................. GATGATTTTCAGGGCGCTTTTAACAGCACATCTCAA 14415 30 100.0 35 .............................. TACAGTCTGATTGGCTACGCAGTAGATATGATACG 14480 30 100.0 36 .............................. CTAATAATCAACAAAATAGCGTTCCAGTGCAATCAC 14546 30 100.0 37 .............................. ACCAAAACACATCCAGTGCTCAAACCAATCAAAGCTA 14613 30 100.0 37 .............................. CGCCACCGTCACTATATTCATCGGAATCTCCAACTCC 14680 30 100.0 38 .............................. TTGCGTGGGATAAGCTCGCAGAACCTTGTGCTACCTAC 14748 30 100.0 38 .............................. TGGTTTACCCAGCGCGGTGTAATTCGCCCGTAGAAATC 14816 30 100.0 37 .............................. GCACCATAAAGATTACGGCAACTCCACTTGATTATAG 14883 30 100.0 37 .............................. CACAGTTTCCACTTTCTACTATCGTCAATGCAGAGTC 14950 30 100.0 36 .............................. GTATATTACGTCGGATTTTCTAATAATGTGAGTTCT 15016 30 100.0 37 .............................. CACCCCCGCATATCCCGGATGTCCGCTATGATTTGCA 15083 30 100.0 37 .............................. AGAGCATCTACAGGTAAGTCGTATAAATCAGGCTTCA 15150 30 100.0 35 .............................. CATACAAAACTTAAAAACCCAAAGCAAAAGGTGTA 15215 30 100.0 37 .............................. CTGATTAGCACGGGATTCCCACTCAACTTTACACGAG 15282 30 100.0 37 .............................. ATGATCGATGAAGCCCACTTGGTGCAAATTCCGGTAC 15349 30 100.0 38 .............................. TTGATCGCGAGCGTGGCATGATGCACTATCGTGCGTCA 15417 30 100.0 36 .............................. TTGGGATGACGAAGACGAATCGTGGGTCATGGCGCC 15483 30 83.3 38 .......................CGAA.G. GTAACGGCTAGTCCAATTAGCACCTATGTCATGGCGCC 15551 30 100.0 37 .............................. CCCGTTGAACTCACTCCAGCGCAACAACGCGACCTGA 15618 30 100.0 37 .............................. ATAATCGTGGTGTGCTTTTCAAAATGAAAAATTATAA 15685 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 28 30 99.4 37 GTTTATAGACTGCCTTTGAGGGATCGGAAC # Left flank : TTAAACGAGTCGCAAAAGTGCTAAAAGTATGTCGTAAGTATCTGTACTGGGTTCAGAATTCCGTGCTCGAAGGTGAGATCACATTGGCGGATTTTGAAGAATTGAAACGAGATTTGAAGCGAATTATATCGCCAGAAACAGACTCAGTGCTTTTTTACACATTTCGAACTACTCGATATACTGAGCGAATAAGTATAGGGCTTCAAAAGGGTGGAGAAGATCGATTTCTTTGAAGCCATGGGTACGCGCTCTTGCTATAGCGCGTAGTATGAATTTGTAGATTGCTTGTGTTGTTGTTTTCTAAATATGAAATATAGTGCTAGAAGCAGAAAGTCGTCGATATCGAGTCGTGCTAAAAACCAGGGGGATCGACGACATACTGGCACGATTAGATTTGCTTGTAATCAGCGGTATAGATCGAGTTTTGCAGGTGGGTGATGATCATCACAAAATTTTTGTGATGATTGTATTGTCTTGTTATTATGATGCGGGTAGAATGG # Right flank : CTATTACTCAAAAAGAATGGATATCGCTTTGGCGTGGTTTATAGACTGCCTTTATGGTGGCCCCATCTGTCAAGACAAAGTTTTTAAAGTTTTAAGCTATAGTCTCTTTCACCCTATCCCTACGCCGTTTGTAGGAGAAGCGGGAGGGGTGAATGGCCGTTAGACCAGAGGAGAGGAGTGGAAGCGGCTTCCCCTGCTCGTTGTCTCTCATCCTTGGTCGTTAAGCAATCTCCTTTCCTATGAATGTATTTTCATGAGATGAGGTAGGAATTGGATCCTCAGGCGTCATCCCTTTCAGGTAGATCTCAGCAGGTGTATGATCCTTGAGAGATTGATGGGGTCTCTCATGATTATACTTGTGTATGAATTTTCTGATAGACTCTCTCGCCTCCCTTGGTGTGGCGTACTCTTTTGTGTACACCTCTTGGTACTTTAGCGTTCGCCAGAATCGTTCGATAAAGATGTTATCCACAGCCCGGTTCTTTCCGTCCATGCTTATG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATAGACTGCCTTTGAGGGATCGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.30,-1.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 252-1467 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPDK01000047.1 Acidibacillus sulfuroxidans strain Y002 contig47, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 252 29 100.0 38 ............................. TCGGCGCAGGCGCGAACGCCCCATCACTACCATTTCCA 319 29 100.0 36 ............................. GATCGACCGTAGCTTTTTGGGAAAGATATTGATACA 384 29 100.0 36 ............................. CTCAACAGAAGAGATAGATGAATAGCCAGTGGAAGA 449 29 100.0 36 ............................. CGCAGGCTAAAGTGCGGCAGCAGAGAGAGGAAGAGG 514 29 100.0 36 ............................. GATCGACCGTAGCTTTTTGGGAAAGATATTGATACA 579 29 100.0 36 ............................. CTCAGCAGAAGAAATAGAAGAATAGCCAGTGGAAGA 644 29 100.0 37 ............................. CCTGTCCATTCCGTTTGCGATTTATACCTTAGCTTAT 710 29 100.0 38 ............................. TAGAAAAAGGCCAGAAATGTATATTGGGGACGTTGACA 777 29 100.0 37 ............................. TTATTTACTAGTTTTTGAGATAGACGATTAACGAATT 843 29 100.0 37 ............................. ATCCATTCCACCTTTTCGTTCTACATATTCGTACCTG 909 29 100.0 37 ............................. TATGGAATTGGGTTGGAATTGTGTTGCTTCTACTGTA 975 29 100.0 37 ............................. TTTTTGCTAATTGTGATGACGAGATTGAGCGATTGGT 1041 29 100.0 35 ............................. TGGTTCGATCTTCAAAATCTCCTTCACAATCATCA 1105 29 100.0 37 ............................. GAAACTCCAAAAAAGTCCAATATACGGTTTATCGAAG 1171 29 100.0 36 ............................. TTCTGCTCGATTTTAGGGTATCCTAGTATAAGTATA 1236 29 100.0 38 ............................. ACGGCAACCCTGTGGAGGTAGTAAGACAGGCAGGCGGA 1303 29 100.0 38 ............................. GGATAGCCCGCTACCGTACCCGATTCGTTCCGACCCTG 1370 29 100.0 40 ............................. GCCTAGCATCTTGAAGATAATCATCAACTACAGCATCTCG 1439 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================== ================== 19 29 100.0 37 GTTCACACTCCACAAGCTAGCTCGCAAAC # Left flank : ATTGAAGGGCTGGTGCAACGACCATAAAGATCATTCTATCCTGCGTGCTTCCCTAAAGGGAGCAACATACTATGGTGCACTGGGTCGTCGTAGTCAGTCTATTGAGCGGGCTCATGGCACCAGTTTGGAACGACCTACCTTCGCCAGCCGCTAAGGTGTCATTTCGACACAAGCCCATTTTCATCCTTCTACTGGTGCCGCTCAGGCGGCATGGTGATCTATTGACTTAATACCAGATGTGCATAGGGTAAG # Right flank : CCCGTTTCTTCCGCAAAAAATCAGCGTTCGCGCTTCGTCGGTTTATACCGGCGTTTTTTTGAAAAGCCCGACTATATTGCATTTTGCTGTCGTCGATCCCCGGAGGTTTTTACGCTATTAGAGGTCGACGACATTTGTTTATGAGCTATATGTGAAGCGTCCGTGCGGTCTTTGTGCACGGAGTTTCAGCCTTTTGGCTACCTTACCGAGCGTTACCAAACCACTTAACAGTTTTATTGGCACTTCTCGGCTTATCGTCGCTGAACCGACGAATAGAAGTATTTGGGAAAGATTTTTATTTGATACTCTCAGCTATAATTTTGTCAATGTTCGGTATTGCTATGTTTCGTGCAGCATTGTAGTCTGCATTGGCTTCGTATCCGCAAGCTCTGCATTTAAAGATAGCTTGTCCAATTCGATTCCCGGAATCTATATTACCACATTCACTACAACGTTGACTGGTATATTGGGGATCGATCTTTATGACTTTAATTCCTGCC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACACTCCACAAGCTAGCTCGCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 1 66355-66101 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPDK01000011.1 Acidibacillus sulfuroxidans strain Y002 contig11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 66354 37 100.0 34 ..................................... CACAATTACCGTAGGTAGAAAACTAATCCAAAAA 66283 37 100.0 38 ..................................... ATTCATCATTTAAATTGTCCTCCTTGTGTATTAGTACC 66208 37 100.0 34 ..................................... CACAATCTCTTTTGCCTTCAGGCATCGCAGCCTG 66137 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 4 37 100.0 36 GTAACAACAGAGGATTGTTCCTTAGAGGGATGACAAC # Left flank : AATCTAAACTAGGGGGAGTAAAACTGCCTGTTTTGTCCCTGTCAAGTCGATTGTGTTATGAGTAGAACCTCCTAGTTTTGCACTGGCAACAGCCACTCCAATTTCATAGAACAATTTGACGGATTGATGTTTAAATTCTTTGTCATACATTCGAATCTTGTTTTCTTCTTTCCTTTTACATTTATTCTTATCAGAATTACGTGTTTTCTGACTATACTTAACCAATACTGCTTCATAAATTCAATTTCTTTTCTATAAAGGTGTTATTCTCATTGAAGGATGTCGGAAATGATGAGTGTTCTTTTTGTTTATTATAAGAAACTCGCGAACCCAAAGTACTCATGCAAGAATAGAGAGGTTCGCGCTAAGGTGGAAAGTGCGTATGGCAGGGGGTTTTGCGTTGTCATGGTGGTAACTGAGTGGTATACTATGGGAAATTCGTCAAGGTTCGCGAATTGAAGGTTACGAAAGCAGATGGGACGGGCTTGATGAATCGCACC # Right flank : TATTGATACGCGAATGCACATGATCGGAATGTAGCACTCCTCATGACCGTGACCTGAACGTGGCGAAAAATCTCATGAAATGGGCTGTGAGTTCCACGGTGACAGCCATGGGAGAGGACGTAAGCCCTTGTCCATACAAAGGCATCCTCAACGAAGCAGGAATTCAATATAAAAGTTATCTATGTGCAGTTTTCTGTTAATTATGAATAATTGTGCGTCTTGTTCATCGATAACGGGGTCACAATACCTACAGTTATACTTGCAAATGATGTTAAGCCCGTTTGACCGTGTATTTTGCCAACAAATGACCACGACTTTCCTTCACTTTTTATCCAATAAATAGCACGATGCTCATTCGTGTCACTTTGTGTTTCGAATCGCATCGACGATTTCCCAACTGACCCAATCATTTACCCTGTGGATGTTCATCCAATGATTTTTTGTGAATTCAATCAGACAAATACCAACTTATTTTATAGCATATACTTGACAAAAGTAAG # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAACAACAGAGGATTGTTCCTTAGAGGGATGACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.70,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 75811-75203 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPDK01000011.1 Acidibacillus sulfuroxidans strain Y002 contig11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 75810 37 100.0 34 ..................................... GTATGAAGCCCTCAAAGATTTTTTCCGTGCCTCA 75739 37 100.0 33 ..................................... TTCTTCATTTAATACATCAAATAGGTCCATATC 75669 37 100.0 34 ..................................... TAGGTTTACACGCAGTCGCTATTTATGGATATAA 75598 37 100.0 37 ..................................... TTAAGTAGTTTTAAGTTACTTTTTAACATAATTTTTA 75524 37 100.0 33 ..................................... TTAGAGATGCAGCGCAATCAGGAGACCGATCCC 75454 37 100.0 35 ..................................... GACATGCCTTTAGCCGACTGGTACTATTCATTTTT 75382 37 100.0 35 ..................................... CATCAAAAACAGTAAACTTAATACTATCCTCTAAC 75310 37 100.0 35 ..................................... AAGCGAGCTGAAGAATCCTGGGATAAGCACGGACA 75238 36 91.9 0 ...............................-.T..A | ========== ====== ====== ====== ===================================== ===================================== ================== 9 37 99.1 35 GTAACAACAGAGGATTGTTCCTTAGAGGGATGACAAC # Left flank : ACATCTTAAAATGTCGCCAAGTTTAGTATTGAAAATTCACGTTTATTTGTTCGACTTCCCTTGACACAGTCTTTTTGAAAAAGACATTCGTGGTAGTTCGGACATACATATTCGTTTTATCGGACCATCGGCATGTTGGATCGCTTTGAGTTTTCATCCTTTTCGGTCGAAAAAATACGTATCCGTCCTAGGAACATATTTTATATGGTCTTAGGATGAAATAAATGAAATAGTAGGCACAACGAATCGGTGCGTCACGGGATACTGTATGTTGTGACCATTATACAATGTTGCTGGTGGATACCTCTTAATTATAAGAAACTCGCGAACCCAAAGTACTCATGCAAGAATAGAGAGGTTCGCGCTAAGGTGGAAAGTGCGTATGGCAGGGGGTTTTGCGTTGTCATGGTGGTAACTGAGTGGTATACTATGGGAAATTCGTCAAGGTTCGCGAATTGAAGGTTACGAAAGCAGATGGGACGGGCTTGATGAATCGCACC # Right flank : GTTATGGAACGAAATCATAATCCACTTATTTACTATAGTTTAATAAAATTCTTCGACATGCCTCGCGATTTTCCACTCACTTTTCTTATTCTTAAAAATTAGCTTATCTCTGTCATTTGTTGAAATTTATTCGTGCATTCAGTCTACCAATTATGCTACTATTAGGCATATTGTGAGGTGTCGTGCGTGCGCATTCTTTTAACTAGTTCGTCCAGAATTACTTTGCCTGTGGCTCATCACGAGGAACTCCAACATGCATTCTATTCGTTGGTCGATGCTCACTTGGTACAAGCATGGCATGAACATGCAGAATTTCGCCCATATACGTTTTCGCGTTTGCTGGGGAAATTTAATGTACACGAAAAACAAGTGACATTTCCCTATGGGTTTCGTTGGTGGATGAGTCTTCATTCTTCTTCGTTGTTGACAGAAATATATGAACGGCTACTTGAAACACCGACTTTCTCACTGGGTCAGCAAAGGGTCGTCGTAGAGCGAGT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAACAACAGAGGATTGTTCCTTAGAGGGATGACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.70,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 3 85298-86262 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPDK01000011.1 Acidibacillus sulfuroxidans strain Y002 contig11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 85298 32 100.0 33 ................................ CTCCCACATTGGGTGTGCCTTGAAAAGTCAAAC 85363 32 100.0 33 ................................ ACTCAGATGGCGTAGCTATTTTATCTACACGTG 85428 32 100.0 32 ................................ TTTTAACAACTCAGTCATCATTGGACGGTGAC 85492 32 100.0 34 ................................ ACCCATTGCGGATCTGTTGGCATACGCAGATTCG 85558 32 100.0 38 ................................ TAGTTCTCGACCCACTAGCCATTCGGACAGTATATCAA 85628 32 100.0 37 ................................ TGAACCGACACATCCACATCTGCACCAAAACCAAGTC 85697 32 100.0 34 ................................ GATTCAAAATAAAGTGGATGCACACGTGAAAGTT 85763 32 100.0 36 ................................ CCCTTGTTTTATCAAATCAAACTTGTATAAATTTAC 85831 32 100.0 35 ................................ AAAAGCATCGACTCGAATATGCAAATTACGAATTT 85898 32 100.0 36 ................................ ATATTCAGCGGTCAGGAAAGCACGATTAAAGGTCCA 85966 32 100.0 33 ................................ AACAAGCGAACACGACCTATACGATTGGGTTGC 86031 32 100.0 34 ................................ AATCAATCTCAACACCTCTCGATTCGAGCGCATC 86097 32 100.0 36 ................................ TGCCTGTGCTGATTTTAACACTTGATACTCTTGTGT 86165 32 96.9 34 .....A.......................... TACAGGGCGAGCAATCCAGCATGTAGTCCGTTTG 86231 32 78.1 0 ...............T...T..TTT...C..G | ========== ====== ====== ====== ================================ ====================================== ================== 15 32 98.3 35 GTCGCCCGCCGTGCGCGGGCGTGGATTGAAAC # Left flank : ATCCTCCATTCTTCTGGAAGTAGCAGGTGATACTTATTATGATGGTGCTCATTACTTATGATGTAAGCACAAAGACCACTGCAGGTCAACGGAGATTGCGAGAAGTAGCCAAGTTGTGTGAAAATTACGGCCAACGTGTGCAAAATTCGGTTTTTGAATGCTTGTTAGATCCAAGTCAGTTCGCAGAATTTAAGCATGTACTAGAAAAAAATATCGATCCGACTACGGACAGTTTGCGGTATTATCATCTGGGTTCAAAGTGGAAAGGAAAAGTAGAACATGTTGGCGCAAGACAATCCTATGATCCCGAGGGGCTTCTTATGATTTGATGTGCGCGAATCTCAAGTGCACATTGAATTTATGGGGGGTTCGCATGCATGACCCTGCTTGGGATATCAATACTTTGAGTTTAGAATAAATGTATTTCTTTTTTCAATTTAGGTCGGTTCGCGGAAACTGTTTGAAGAACTCAGGCGAATCAAGGGTTTATAATAAGTACA # Right flank : GTGAAAAATGCAGAGAATGGCGGCCAATTTATGCATAGCACTGCCAACGTTAATTACTGAATATTAAGACGACATACTAGATAATGCATGGCGTAATCGAAAGCTTTCGCCTGTAAAGGCGAGGATATGTGCATGATGCACCAGTCGATCGATTAACGCAGCCGTCAAGCGATTGTCACCAAACACGGTATTCCATTGTCCAAATTCTAGATTGGACGTCACCATCACGCTACGTTATTCATAGCAGGTAGAAATGACATGAAACAACAGCTCGGCACCTGTTTGGTGAAACGGTACGAACCCGACCTCATCCAAGATCAACAGATCACAACTGGTGATCTCCTTTTGAAACCTCGCCAACGTGCCTGCCTGATGCTTTTCTTGCAAGAGCGCCACCAGATCCGGCACCCGAAAGAATCGAACCGTGTGCCCCCGTCGGCAAGCCTCCACCCCGAGAGCTAATGACAAATGCGATTTACCGTTATCGCAATTTTTCCATA # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCGCCGTGCGCGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.50,-6.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA //