Array 1 41965-43472 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQMV01000012.1 Corynebacterium sp. 3B NODE_12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 41965 36 100.0 28 .................................... CGCCTCCGACGGTGGCGTGATGTTCAGC 42029 36 100.0 28 .................................... CTATGGGGTGTGACCGTGAAGGAGTTAC 42093 36 100.0 28 .................................... GGCTAGTCTCACTGTCTCTGCTTGTTCT 42157 36 100.0 28 .................................... ATTGGGCTTTGTTGCCTCCCGCACCCGG 42221 36 100.0 28 .................................... CGCCAACATCCAACCCCTGCAAGCCCGC 42285 36 100.0 28 .................................... GGGATCGACATAGGGCCGCGATGGACCG 42349 36 100.0 28 .................................... ACGATTGGCCGGTCCTCTACCAGTACGG 42413 36 100.0 28 .................................... TTTCGAGGTAGTGACGTGGCCCGGGCAC 42477 36 100.0 27 .................................... CTCGTAGAGAATACCGCCATGCACTCA 42540 36 100.0 28 .................................... AGGCGGTGGCGTACCACAATGCTTTCTC 42604 36 100.0 28 .................................... ACCAGACACCACTCGAGCAGCACCTCCG 42668 36 100.0 29 .................................... TACTACTTCCGAGGCCGTACAAGCGCTCA 42733 36 100.0 28 .................................... TCGCGGCGGTGCACAGCCCAGCGCACCC 42797 36 100.0 28 .................................... ATAGCCAACGTCTCACGTGGCGAGACAA 42861 36 100.0 28 .................................... CTACATCTAGTAGGGCGTCGAGCGTGGG 42925 36 100.0 28 .................................... ACTGTAGCGGGGCTCACGCACCAAGCAC 42989 36 100.0 28 .................................... GTCATCGGGCTGGGCGAATGCCGATCCA 43053 36 100.0 28 .................................... ATCCCAGCCGTAGAACTTCCACTCATGG 43117 36 100.0 28 .................................... TTAGACGGGATACGGTGCTTCGCGCGGG 43181 36 100.0 28 .................................... GGTCGAGGACGTGCACGCTGGGGCGGCG 43245 36 100.0 28 .................................... TGGGTGTGGGAGTGTCCACCGGCGCCGC 43309 36 100.0 28 .................................... AGCGGCGTCAGAGGTGTATTCCGGAGAG 43373 36 100.0 28 .................................... CACTGCAGCGTGGGATACGGCCGAGGGG 43437 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================= ================== 24 36 100.0 28 GAAGTCTATCAGGGGTATATCGAACTGAACCCCAGC # Left flank : CATTCAACAGCAATGGCCAGAGTGTATCGACGGTCTTTCAAGACTTTGCACAGCATTTTGGTTTGTACGTCGAAGGAACAGTGGATCGGCTACAAGTCCCGCGTTGGGAAGGGCAGCTCAGTGCCAGCGAAGGACAGTGAACCGGTGTGGTGCGTCGTGATGTTTGACCTTCCGGTGAAGACCAAAAACCAGCGTAGAGAAGCTAATCGCTTCCGCAACCGGTTGTTCGACCTTGGGTTTTGCCGCGCCCAATTCAGCGTCTACGTTCAGTATTTCCCACTGGCGGCGCGTCTCAGCACGATAGTCAAACAGGTGAAAGGCGAACTTCCCGCAGGCGGAGAAGTGCGTATTTTGTCCGTGACGGACCAGCAGTGGGCAAAGGCGATCCGTTTTTCGAACCACAAGGAACAAGCGGTCGAAGAAATCCCCTCTCAACTAACAATTTTTTAAAAGCGCATGCCGAAAAAGACCCAGTTCAGGCCCTGTTTCTGGGCCTCACT # Right flank : CGAAAATGGGCATGGTGGCGGTCTCGGTTAAAGCCTATGGCGCTGCATCACGCTTAACGGCAGTACCGTTTTCCACGTCCTGTGCTGCGATGATCCTACAACCACAAGCCTGTGGCTTTCTGCAGGATCACCGCATCGCGACCTACCGCGTCGCCTCCTCCAACAGGTACAGCACGTGCTCATAGCTCCGCCCAGTGATTTGCTCCATGCCCAGCTCGCAGGTGCGGTTGGAGGACACATAGGCGTCCACGCGCCCATTGGCTTCGGCCTCGGCCAGCCCGGCGCGCTCGTCGCGGGTGGCGGCGTCGAGAAGCTCGGGGTGGAGCATGCCGCGGTCGCCGGCGGTGCCGCAGCAGCCGGCGCCGCGGGGCACGAAGGCCTCCTCGGCGGCGAAACTGGCGACGCGCACGAGGGTGTCGCTGAGTTCCATGTGGGCCAGCGAGCAGTTCGGGTGCACGGCCACCCGCCCAAGGCGGCGGGTGGGTTCAAGGTGCTCGATC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGTCTATCAGGGGTATATCGAACTGAACCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.70,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.01,0 Confidence: HIGH] # Array family : NA // Array 1 60016-62056 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQMV01000006.1 Corynebacterium sp. 3B NODE_6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 60016 28 100.0 33 ............................ CTGTCGATGAACTGGTGGATTACGTAGTTTCCA 60077 28 100.0 33 ............................ TTGTCCCGTTGTCTTGAAACGTCACGCCGCTGC 60138 28 100.0 33 ............................ TCCGGGCAATTTCGGATTCACCGTAGCCCCCGT 60199 28 100.0 33 ............................ TGCCTCATCGAGGTATACGGTATCGCCAGATAG 60260 28 100.0 33 ............................ CTCACGCTCTTCATCTTCAAGAGGGCGCTTCAT 60321 28 100.0 33 ............................ GATGCTGCCCCTCCCACACACACGCGGGAGGGA 60382 28 100.0 33 ............................ GGCTAGAGGGCGCGCCATCCGGCCCGTAGTGTG 60443 28 100.0 33 ............................ GCGATCGAGGCCGTGGGGACCGGCTCGTACTGG 60504 28 100.0 33 ............................ CATTCATGCGATAGGCGTAGAGGGCGATGCCTT 60565 28 100.0 33 ............................ GTGGGATAGAGGCGCGATCGGTCCGGACGATAT 60626 28 100.0 33 ............................ CCGTGAGCGGCTGGGCGTGAAGCCCGATGCGGA 60687 28 100.0 33 ............................ GCTTACGCTTGAGATAGATGGGCCTCCAAGGAA 60748 28 100.0 33 ............................ TAGCTAGATCGTCGATAGGAATACCTGCGGTGT 60809 28 100.0 33 ............................ GAGCAAGCCCAAGAGATTCAAGCGCGTGTTTTT 60870 28 100.0 33 ............................ CTGCCCGATAGCGACGGCCGTAGATCAGTGGGG 60931 28 100.0 33 ............................ TGTGGAGCACCGGCTAGGGGGCGGGGATGATGC 60992 28 100.0 33 ............................ TCCCGAGCCATCTTGAGGGTGCAAGATGGCCGG 61053 28 100.0 33 ............................ CTGGGCATGCAATGTGTGCTATTTTCCCAGCTA 61114 28 100.0 33 ............................ CTCGACTATGAGGAATACGAATACGGCTTCCTG 61175 28 100.0 33 ............................ TTTCGACATGGACGCGTTCCGCCGCCGTGTCGA 61236 28 100.0 34 ............................ ATGCGCCATAGACCGCGTCGGCGTTTTCCTCGAC 61298 28 100.0 33 ............................ GTCCCTGAGCTGCTCTTTTGTCCCCTTGAAGGC 61359 28 100.0 33 ............................ CAGCCTTAGCCATCTGCGCCGCACCATCCGCGC 61420 28 100.0 33 ............................ GCCCGGATTGCCGGGAATACCGGTCTCTTCGCC 61481 28 100.0 33 ............................ TCAGGTGTACGACCAGTTTTCCGGACAGCTCAG 61542 28 100.0 33 ............................ GGAAGTGGTGAACGATGGCGCAGGTATATCGCG 61603 28 100.0 32 ............................ CCATCGCCAGCATGAGCTACGAGTACGCGGTA 61663 28 92.9 33 CG.......................... CTACTCGCCACAAGCCTCGCCGAAAAAGGACAC 61724 28 100.0 33 ............................ TGTGGATACCCTCTGGGGCGCCGTCCACGTCGA 61785 28 100.0 33 ............................ GTCTGACCTGAACAAAGATGACTTTCAGAAGAA 61846 28 100.0 33 ............................ CGTTGCTCGCAGCGGATGCAAACCCTCTATTGG 61907 28 100.0 33 ............................ TTGTGCGGCGACGGCCTGCGATTCGACCGCATA 61968 28 100.0 33 ............................ GAACTATCGAAAAAGGTCCAGCAGGCCGAAGAT 62029 28 92.9 0 ..........................TG | ========== ====== ====== ====== ============================ ================================== ================== 34 28 99.6 33 GTTTTTCCCGCACGCGCGGGAGTGGACC # Left flank : TTTTAGATGGCGGTAAGACAGAGCTATCTGGAGGGTGGCTTGCCGCCAATGGCATCGTATTCAAACGTATCCAGGACGCCCCGCCTGTCAGCGTTGAGATGATGCTTCACGCTAGTAAAGGATGGCAGACCTCCCCAGAGCTTGGAGCATCTGACCATATTCTCGACCGGCTCTCGGATACAGCGCCCGACACGGTAAGAGTAGAAGAATACTTACCTATTGCCGTGGGCATAGCCGTGTCAGGGCGTCCCTTGGCCCAACACGGAGTGGCGCATCTCAAAGGCCGAAAGAGGTTTCTTCCGCGCCCGACATATCCAGTAAGTTTATGGACTCTAGAGGTTCTATCGAGGAGACACCGTGGTTCTGGTCTGTTGGCGGAGGAGGTGACGCGCGGGAAATTTAAGACTGTTGCTCCACCGATCGTAGTTTAGTTCGTTCAAGGCGAATAGAAGTTGAATCTATACGCCGTGTTTGCTCGCTAAACCTGCTGTTCGCAGAGT # Right flank : GCAAGCTCCTGTGTTTACCTAGCAATCCAGTCGAGTTTGCCGAGGTCACCAAAAAATGTGACCCATTGTGGAGCGTGAGGGGCATCGCAGCGCTATGTGTCCATCTGTCACGATTGTGATCAGCTGTCACCTCGTTGAAAGCATGCATGAAGCATCGTTTCCTGAAGCGGTTGTGCCTTGGCAGCGGTGCTGATTTGTCCGCTGTAGCTTGTGCGCCTGTGACAGGAATCGGTTGCTGGGCACTGAAGACTCTTTCTTACTGTGGTCGGGATGCATATGGGCGCCATCAATTACCGACCTAGATCTGAATACCACTTATCTAGCGATGTCCCGATCCAGTTGAGTAGTTTTTCCAGAGCGTCTTAGGTGGAAACTTGACCGCTCCTGCGTTAACGAGTCCGTGGTCGTAGTGATACTTCGTTTGCGCTTCAGCCTTGAGTGCGGCGGGTGCCGTTTTCAGAAGTACTCGAATGGGCGGTAGAAGACATAGATGCGGCTCT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTCCCGCACGCGCGGGAGTGGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-11.00,-10.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //