Array 1 3679-4091 **** Predicted by CRISPRDetect 2.4 *** >NZ_QLLE01000067.1 Acinetobacter johnsonii strain HAMBI_97 GDIGBBFK_67, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================================== ================== 3679 30 73.3 54 ....GA...T.....AT...A.A...T... AATGAGTATAACTTTCAGTGGCTTGAAAGGATCTAAAAATCGCCTATACGATAA 3763 29 86.7 30 C..-.A.......................C CGCATTCGCGGTGACGCACTGAGATTATAT 3822 30 100.0 30 .............................. GCCAATCCTTTTATTTCTCTATTTGGTCGT 3882 30 100.0 30 .............................. ATCCTGGCTGACGTAGAAGAAGACTCGGTT 3942 30 100.0 30 .............................. TACAACTAGACACAGTGACACGCGAATTAA 4002 30 100.0 30 .............................. ACAATTTTAAAGTCCGGTCCAGCGGTTGCA 4062 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================================== ================== 7 30 94.3 34 TTCTACAAACCGCATTCGCGGTGACTCACA # Left flank : AACACAGTAAAACGCTGGTGTATTACGATTGAGGATTGCTACAGGTTCACCTTTTCCTGCGAGCACTGTATCCATCGGACTCTTTTTGAGTTCAGTAATACTTGCAGTCATTCGCGCATGGATTAATTGAGTCATGGTTAAGTCTCTATAGAATAGTGTTTGGCGTCTGGGTGAATTACTACAAGTAATGCAGGAACAATAGCACACTTAAAAGCATGATTAAATGTACTTTTAAAAACTCTTACAAGAAACATAAATGAATACTAAAAGAGCAATAAATCTTTGAATGTGTAGTTGATTCGGCTAAAGGCAACTGCCTAGATAATGCTGCAATGGAGAGCTTCTTTGGAATACTAAAATCAGAGTGTTGCTATGGTGAGGAATTTAAATCAGTTGATGAGTTGGAGCGAAAGGTGACATGTTTATAGAGAATCTTAAATAACTAATTTCAAAATCATGCGATAACTCACCATCAAAAAAGCCCATTTTTAAAATGGGCT # Right flank : AACAATATTAAGAATATATGCTGTGATTAATTAATAATTTACAGTTTTTTATGCAAAAAATCAAAAAAAATTTAATGAACTAAAATTAAATATATTCAATAACTTGAATCATGAATTAAAAATTTAGGTGATTTTATAGAACTTTACTCGAAACTTACAAAGAAATTCTTATAAGAAATTTTATGTGAATTTAGAGTATACCCTAAAGCAACACTCAGAATGTCCCGGATTTTATGTATCATTTAAATGATTTTTAATCATATATAACATGTAACTTTGATATTAAAGATTTATAATTTACGAAATTGTTCATTTTTATCCAATTGGGGAGTGAAAGAGTGAAAGGTCAAAAAGTAGGTTATGTCCGGGTGAGTTCAGTCGAGCAAAATACAGGACGTCAACTTGAGGGAATTGAAATCGACCGGATTTTTGTTGACCGAGCTTCGGGTAAAAATACCGACCGACCGAAATTTCAGGAAATGTTGAACTATGTCCGGGAA # Questionable array : NO Score: 2.85 # Score Detail : 1:0, 2:0, 3:0, 4:0.71, 5:0, 6:0.25, 7:-0.11, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCTACAAACCGCATTCGCGGTGACTCACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.68 Confidence: LOW] # Array family : NA // Array 1 63413-64821 **** Predicted by CRISPRDetect 2.4 *** >NZ_QLLE01000003.1 Acinetobacter johnsonii strain HAMBI_97 GDIGBBFK_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 63413 28 100.0 32 ............................ TGTTGGATGCACACCAAAACCCAAAACCACCC 63473 28 100.0 32 ............................ TTTTTCTTAAACCATTTGAACATTATAGTTGT 63533 28 100.0 32 ............................ TTTAGACTGCCACAATTAAGCAATTCGTTTGT 63593 28 100.0 32 ............................ TTACGAATATGACCAGTGATTGATTTCAAGCC 63653 28 100.0 32 ............................ AATCAGGTAATAGGTTTTGTTCGCCGTGGTGA 63713 28 100.0 32 ............................ TTTCAAAGAATTATAAATCGACTTCGCAGCGT 63773 28 100.0 32 ............................ ATTATCATATCATGGTGTTTAGGTATCGAAAG 63833 28 100.0 32 ............................ ATTAGTTTGGACATGGTTCACCGTCAAAAAGG 63893 28 100.0 32 ............................ TATCTTGAAAAATGACTCATTGTTTCCAGATA 63953 28 100.0 32 ............................ TTATTAAGCGTAAACAGTGCCTTCAACAGCAT 64013 28 100.0 32 ............................ AATCCGTAATTCCATCCATTGCTAAATCATTT 64073 28 100.0 32 ............................ TCAAAAATATCCGCAGTTGCTTTTACTTGCGC 64133 28 100.0 32 ............................ TCATATCCGCCATGTATTTCATTCAATGTCCC 64193 28 100.0 33 ............................ CAAGGCAGCACCCGCTCCACGCATACCATTGAT 64254 28 100.0 32 ............................ CTCAGTAGCCGAAGAAATCCGACCAACGGCAG 64314 28 100.0 32 ............................ TTATAAATAAAATCGATTATACGATATTCGAG 64374 28 100.0 32 ............................ ATAATCTTTTGCTATTTGAGTGAAATGGTATG 64434 28 100.0 32 ............................ GTTATAGTTGACTTGTTGCTGTGTTTCTCCGC 64494 28 100.0 32 ............................ TATGTGCTTAAGCGCAGAGATATTTTTGGTGA 64554 28 100.0 32 ............................ ATACATAAATTGTATGAGCCATTGCAACCGTA 64614 28 100.0 32 ............................ ATAATGACCACACCGCGAGGAAAGTTCTTATT 64674 28 100.0 32 ............................ TGTCAATACTGCAATCGTTTGAAGGTCTCGTA 64734 28 100.0 32 ............................ AATGGACAGAACAGCAATGCAAGGACATATAC 64794 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 24 28 100.0 32 GTTCACTGCCGCATAGGCAGCTTAGAAG # Left flank : ACTGGACATTCGACGTTGGCTTGAGCGTTTAGAAGATTATGTACATGTCACTTCTATTCGTGAAGTACCTAATGATATTAAGAACTATGCCATTTATAAGCGTAAGCAAGTGAAAACCAATGCACAACGTTTGGCGCGTCACCGTGTAAAACGTGGGGATATTGGCTTTGATGAGGCATTAGCCAGATACAGCAATGTAGTTACGACAACCAACATGCCTTATATTGAAATGAAAAGCCTGAGCACTTCAGATCAGCAAAGTGAAAAACGTTTTAAATTGTTTATCGAAAAGCAATCTGCTGAAAAATCTGAAACTCAGGTTTTTAGCACTTATGGATTAAGTTCGGTGTCATCTGTACCAGAATTTTAACCCAATATTTTTTGATTCTTTAACAGCTTAATAAAATCAATAAGTTATAATAGTAAGTGAATACTTGGGTCTTTATAAGATTTTAGGCATAACTTACTGTTATAGCTTTATTTTTTTCGTTAAAATTATT # Right flank : GTATTATTTTCAGTTATACTTATGGAAGCGAGATATTCTGTAAGTAATTCTTGTAATAAAAAGCCAATTATCTCGGAAGATAATTGGCTTGAGCAAAGAGTTTGGCTATCCGATTATTCGTCGATCATCCCAATAACACGGTACTACAATCAAATTGTTTTCATGTAATCGTGACCATAATCGGATACCTAAATCCCGCTGCATATTTTGGACTGTGAAATTGGAAATTAGTAGAGTCGACTTCATACTGTCATAACGGCTATATAAAACCTTATGTACCATTTCTAGACGTTTTTCATGCCGGTCATGCAGGCCATATTCATCAATCACTAATAAATCAAAACTGGAGAAATGGTCGATAACTTCCTTCTCAGAACGTGAAGGATCAGACCAGGTATCCATCATTTTTTGAGCAATTTCTGCACTGGTATAGTAGCGTGCAGATTTTGTACTGTTATGCAGAATGTTGCGAATGATTGATGCACTCAGGTGGGTTTTGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [80.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //