Array 1 465950-472267 **** Predicted by CRISPRDetect 2.4 *** >NZ_NBIM01000001.1 Oceanimonas doudoroffii strain ATCC 27123 NODE_1_length_2085155_cov_67.334, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 465950 29 100.0 32 ............................. CCGGTCAGCCCTCCAGTCTGCTGGGGCACGGC 466011 29 100.0 32 ............................. GCCAAAGCCATCTCCGACATTGCCGGATCCAG 466072 29 100.0 32 ............................. GTGAACCGCTGGTATATTGGGTGTCCTGATAA 466133 29 100.0 32 ............................. GAAGGGGTGAGCGACCTTATGTTGCCAGTTAG 466194 29 100.0 32 ............................. GCTGAAGTCAAAGAAGCCCCGCCTGCCAATAG 466255 29 100.0 32 ............................. GGGCTGAGCCTGACAGGTATTTAATCAAAGCT 466316 29 100.0 32 ............................. TTATTGGCTACCGCTTCCCTCATCCTGGCGTC 466377 29 100.0 32 ............................. TGGAAGGCCTCGGGCCAGAAGTTAGACCAAGA 466438 29 100.0 32 ............................. GCGGTGCGCATCCAGAAAGACGGGCGCCAGGT 466499 29 100.0 32 ............................. TTTGCTGATTCTGTCAGGTGGGATTCCATTAC 466560 29 100.0 32 ............................. AAACCCTCCCGTGTAGGACGAACCAATACCCA 466621 29 100.0 32 ............................. ACGAGATTGCGAATTACAACCAGCCCTCAGCA 466682 29 100.0 32 ............................. GCCGTGCGCTTTGGCGACGGCTACGAGCAACG 466743 29 100.0 32 ............................. GTCTTCAACTCAAAAAATACGCGCAGAGTTAA 466804 29 100.0 32 ............................. GCCCGGGGCCAGATATCCAGGGTGACGGTGTG 466865 29 100.0 32 ............................. GTGGTGGGTTTACCGGTGATGCTGGCCCAGGT 466926 29 100.0 32 ............................. CAATCTCACTCATTTCAAAACACGCGATAAGT 466987 29 100.0 32 ............................. GCGGTTACCTGATGGTGCTGGGGGGTAATCAG 467048 29 100.0 32 ............................. CATCTTGCTTGGCGTACTGCCGGTGGTGACGT 467109 29 100.0 32 ............................. CAACTGAATGTGATGTGTGTCACATTTTTTTC 467170 29 100.0 32 ............................. TCCGAAATTTGACGAGGATTCATTTCCCAAAA 467231 29 100.0 32 ............................. GGGTGGCGGTACATTAGGGAGCGAAACCGGAT 467292 29 100.0 32 ............................. AGAGGGTGTGCGACGGTGTACACTCGGATTTT 467353 29 100.0 32 ............................. GATTACGATTATGTCACTTTCAATTCTGCGTA 467414 29 100.0 32 ............................. TAAACGGCGTCATTCCATAATCCCCTCAAGCC 467475 29 100.0 32 ............................. AAAACAACGAAGCCATGCTGGAAATCAACGGC 467536 29 100.0 32 ............................. CGCAGCGACCTGATCGCCGGCCTGTTTGTGGA 467597 29 100.0 32 ............................. GCAATGCCCAGCGCGCGGGCCTTGTCATTGGG 467658 29 100.0 32 ............................. TACACCAGCGGTGGCCTCGGGGCGCTGGCCCA 467719 29 100.0 32 ............................. ACGTCAACATCACCGGCAAGACCACCAGCATT 467780 29 100.0 32 ............................. GCCAGGCCCACGACGGCATTGACTTTGTACCC 467841 29 100.0 32 ............................. TATGGATTAGATGGATCAGGCCAGAATTAAAC 467902 29 100.0 32 ............................. ACCTTCGAAAAAATCCTTATTTAATTGAGCGT 467963 29 100.0 32 ............................. CGCGAACAGGAAGAGCGGGAGCGTCGCATTGC 468024 29 100.0 32 ............................. CCTCCACCCTGCCTGCAACCCCATTTCCAGCC 468085 29 100.0 32 ............................. GCGCGGCGGTAATGCTCGGCGGCCTGTTCTAG 468146 29 100.0 33 ............................. CGATAAATCCCCATCCCCTCGGGCTCCCATTCC 468208 29 100.0 32 ............................. GCGTATGAATCACGCATGACTGACCATGCCTT 468269 29 100.0 33 ............................. TCGGCATAACCCTGGCCGGCGTCGTCGCCGCCA 468331 29 100.0 32 ............................. TTACTGCCGGTGTCGCCACCGCTGGTGCTCTG 468392 29 100.0 32 ............................. TTAACCGAACAGGCTAAAAACACGCTAAATAG 468453 29 100.0 32 ............................. ACGTCCCGGAAAAGGTGGTGGGACTGGCGAAG 468514 29 100.0 32 ............................. CGCGATATAAAGAGAGGGTGTGCGACGGTGTA 468575 29 100.0 32 ............................. CGTTCGATGCAATGGCGCGGGACCGTTCGGGG 468636 29 100.0 33 ............................. TTGCTGCACAGATTCCTCAGTGGCGTGGCGCCC 468698 29 100.0 32 ............................. CGTCGGCGACATGGAAGCCAAGGGGATATTGA 468759 29 100.0 32 ............................. ATTAAGGAATTCCCTGGCACCATAGATCCGGT 468820 29 100.0 32 ............................. GTGATCGGCTGCAGGCAATCAATGGGGAGCTG 468881 29 100.0 32 ............................. AATTCCATGCTTGTTATAGTAAGGAGGCGACA 468942 29 100.0 32 ............................. CGCGCCCGTGAACGGGCCGCCGCCGAGGGCAC 469003 29 100.0 32 ............................. CTTTTTGTCAATATTGATAAAGTCGGTTTGTA 469064 29 100.0 32 ............................. AAAACCGACTCTCTCAGCCACACTCGCATATT 469125 29 100.0 32 ............................. GGGTCGTCGCGGAACAGAGCACGATATTGAAA 469186 29 100.0 32 ............................. AAACAGGCGGTCAATTATGAGCGCAACCCAAA 469247 29 100.0 32 ............................. GCGAACAGCGGATCCGCGGAGCAGGTGCGGGA 469308 29 100.0 32 ............................. GCCGATTTCTGGCGGCACTGGCAGGAGTGCTT 469369 29 100.0 32 ............................. TCGATATCTTCCCATGCAAGGGCGGTCACCTC 469430 29 100.0 32 ............................. TTTACCCTGGTGGAAGTGCCGGCCGAGCAGGT 469491 29 100.0 32 ............................. CACGAAAACCCCCAAGAAGTTTTGGACCGACA 469552 29 100.0 32 ............................. TCCTGGTAATACCCCTTGGCGGTGGCGGCAAA 469613 29 100.0 32 ............................. CCATGCTTTACACGCTCTTGCTCGGAGCGTAG 469674 29 100.0 33 ............................. GGGTGGAGCAGCCAAGTTTTACGAGACCAGAGG 469736 29 100.0 32 ............................. CTGCAGTTCCTGCCCGAGTATCAGGGCTATGT 469797 29 100.0 32 ............................. TCGGGCCAGATCACCATGACTTCGCGGTCGCC 469858 29 100.0 32 ............................. GCTGTAGTTGCGACCAAAGCTAGCCTGAAAGA 469919 29 100.0 32 ............................. GTGGCATTCGTGGTGGAGTCTATGGTGCTTTA 469980 29 100.0 32 ............................. TAAGCGGGACACCTCAGCCACTTTGGCTGCTT 470041 29 100.0 32 ............................. GCTTGCTAAGGAATTAGCCAAACGGGGGAAAG 470102 29 100.0 32 ............................. GTTAATAGCTCCATTTCCTGAACCTGTGGAAA 470163 29 100.0 32 ............................. CCTTTTCAAGTGCCCGATCTTTTGCCTAACTC 470224 29 100.0 32 ............................. ATTGCCGTGGATATGGTGGGTCGAGTGTTCAA 470285 29 100.0 32 ............................. TTCGGCGGTCTGGCTCTGTCGCCTGACTTGCA 470346 29 100.0 32 ............................. TCGGTGCAGTCGTCCCGTTCGGCCATGATCTC 470407 29 100.0 32 ............................. GTTATTGAAGAAGTGCAGCCCCGCGACTTTAA 470468 29 100.0 32 ............................. TAGACCGGGTGCGGGTAACCATTGGAGTGCCT 470529 29 100.0 32 ............................. GGTGTCGAGAATGCTGCCGCCGGCCTGTGCCG 470590 29 100.0 32 ............................. CTAAAAACACGCTAAATAGATTCAACGTTCAT 470651 29 100.0 32 ............................. GCACTTCACTCGATACGACAATACCGTTAACA 470712 29 100.0 32 ............................. CCACTATCAGACCGGCCAGTATCAGACCGGCG 470773 29 100.0 32 ............................. CGAGACACGGTTACTTGTCATTCAGTCGGTAA 470834 29 100.0 32 ............................. TTCCCGCCGTATCTGGCCGTGGTCGTAAGTCC 470895 29 89.7 32 ..........................GAT TCTGATGCGGAGGCCATTAGCGAGTCACAGCC 470956 29 100.0 32 ............................. CGGCATACGGTCGTGGTACTGAGCGCATACCT 471017 29 100.0 32 ............................. TTTTTGAGCAACACTAGCTGCCGATTCATTAA 471078 29 100.0 32 ............................. GTTGAATTTGAGGTGATCGCATAATGGCTAAC 471139 29 100.0 32 ............................. CCGGCGATCTGGTTTCCACCAGCCAGCTGGGC 471200 29 100.0 32 ............................. ATTGTTGGGCCGACATGCTGCGGGTCAACGAG 471261 29 100.0 32 ............................. GCCGAATTCGCCCAGGGTGTACTGATCCGGGC 471322 29 100.0 32 ............................. CATAACCAGGGCGGATCGGATCGCGGTCGTAC 471383 29 100.0 32 ............................. TTTTCATTGGTCGATCCTCGTTTAATTAACAT 471444 29 96.6 32 ................G............ TTCAGGGGATTGTGATGGACCGAATAGATGGG 471505 29 96.6 32 ............................T CATTATGGCAAATGTCGGACATATCACAAAAC 471566 29 100.0 32 ............................. CGAGCAACAGCTATAACCACATGACCCTGCGG 471627 29 100.0 32 ............................. GAGCTGGGTCGTTCGCTCGGGTCAACCAGGGC 471688 29 100.0 33 ............................. CTCACCCTTATCGAAGTCGATATCTTCCCATGC 471750 29 100.0 32 ............................. TTGACCTATCCCAATAGTGCCGTGGTGGGGCT 471811 29 100.0 32 ............................. TGCTGGAAAAACCTGATGTTGTAATGGTTGGT 471872 29 100.0 32 ............................. AATCATTGGCCACGTTATCGGCAATGATGCCG 471933 29 100.0 33 ............................. GGGATCAGCCCACCCGTCAGGTTGCTGGCATGA 471995 29 96.6 32 .......T..................... TGCCTGTTTGACGCATAGCACCCCTGGCCATG 472056 29 100.0 32 ............................. AGGCCATGGTTGACGTGCTGAACTACGTGGCA 472117 29 100.0 32 ............................. AACGCTTCATCAATGGAATACACCTCCACCGC 472178 29 100.0 32 ............................. CTGGGGTAATCCATGACCATTATCGACGACAT 472239 29 96.6 0 .............A............... | ========== ====== ====== ====== ============================= ================================= ================== 104 29 99.8 32 CCGTTCCCCGCAGGCGCGGGGATAAACCG # Left flank : CTTATTGAAGAAGTGCTGGCCGCTGGTGAAATAGTGCCACCGCCGCCTCCAAAAGATGCTCAGCCCATTGCGATTCCTGAGCCAAAACCGTTGGGTGAAGAAGGACACAGGAGTGGCTGATAATGAGTATGCTGGTGGTGGTAACTGAAAGTGTGCCCTTCCGTCTCAGGGGCCGGCTTGCCGTCTGGCTGCTTGAAGTAAGGGCGGGAGTGTATGTGGGTGATGTATCCAGGCGAGTCAGAGAAATGATTTGGGAGCAGGTCACCGAACTGGCTGAACAGGGCAATGTGGTAATGGCTTGGGCGACTAACTCTGAGTCAGGATTTGAATTCCAGACCTATGGCCAGAATCGGCGCATGCCGGTGGACCTGGATGGGCTGCGTTTAGTGTCTTTTTATCCTGTTGAAAATCAGTAAGTTATGGATCTTTAAAAACATGGAATAGTTGGTGGCTTTTTCATGCCTGGAAAAAGTCATCTAAATCAGTAATATACGTTTAGT # Right flank : GCCGTCTATGTTCTTGGCGATGTATTTGGCGATCCGTTCCCCGCAGGTATGGGCTACCGCTAGTCGAGATTCCGGGTGGACCCACAGCTGCATGTGTGGGGGAAGGTAAAGCAAAATAATTTAGCTTAATCGGCATATATCATGGGTATAAGATATAAAAATATTTGTACCACATGCGAAGTTTGGTGTTGATTCAGAATTTACTTTCTTTATTTCCCTCATGTCTCAGTTGTTATACTCCTGCTCTTCCTCGAGGCTCAGCCCATGAACTGCTACTTTCCCGCCATTGCTCACTGCTCCGATACCCATGATTTTATTCACATTGCGGACGAAGGGGAGCTCGATGAACATCACTGGCATGCCGGTGACCGGCTGATTGACGGCACCGGCCGAGTGCACGTTTTGTCGCAGGGCGAAGGTGAAGGGCTGTACTGGCGGCCGCTGCCAGGGCTAGTATGCCTGCCGGAACTCAACGCCAGCCTGCGCCACTTTGCCGCCGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGCAGGCGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CCGTTCCCCGCAGGCGCGGGGATCAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //