Array 1 12005-16386 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADIXU010000043.1 Vibrio vulnificus strain Vv3 NODE_43_length_36512_cov_21.935227, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 12005 32 100.0 34 ................................ ACATATAATAACGCCAACAAAAACTAAAGGTGAG 12071 32 100.0 34 ................................ TACACAGCCAAAGATAACGCACTGAGTAAAGACT 12137 32 100.0 34 ................................ AGTTCTTTTGTTCTTTCCCCTCCCTCATTTGCCT 12203 32 100.0 34 ................................ TGCCGTTGTCATTTTTGATAAGCATTGGGCTTGG 12269 32 100.0 39 ................................ AATTGAGAATGGCGCTTTCGGAAAGGAGGTCAACGCTTT 12340 32 100.0 35 ................................ ATGTGCTTATCGATGAGGTCGTGTAATTTTTGTCT 12407 32 100.0 33 ................................ TAGGTCGCTGAGCTTTTTGACAACTTCAGCTTT 12472 32 100.0 33 ................................ ATCCTTTAGCTGGATATATCCCTTTAAGCGCAA 12537 32 100.0 34 ................................ AGCGATGACAGTCGGTGTTAGCCCTGCATCAAAA 12603 32 100.0 35 ................................ TCGCAGCATCAGCGGCCGCTTGAAGCGCTTTCTTC 12670 32 100.0 34 ................................ GTTATCGTGAGCTTTGCGCGTCGCAGCAAGAACA 12736 32 100.0 34 ................................ GAGCTCGCTCGGAACAAGATCTTTACTTGATGGT 12802 32 100.0 34 ................................ CGAATTGGTGATGTTCTTCACCGCGTTTGATTTG 12868 32 100.0 34 ................................ GCGATCTGTATCAATGGATTTTGAATGACATCTC 12934 32 100.0 34 ................................ GGATATTTTCGTTGCGTAATCGGTTTCTCCTGTA 13000 32 100.0 33 ................................ ATAAAATCTTCGTCAGAATCACCGGCTGGAACC 13065 32 100.0 33 ................................ TCCATGTCCTATCAGGTGGTGCGCTACCACATC 13130 32 100.0 34 ................................ TGGGAAAAGGTCAGACAAATGGGCTCGATAACCA 13196 32 100.0 34 ................................ TTGCCAGCGTAGGTGTTAAAGTCGGCGTTTTTCT 13262 32 100.0 34 ................................ CGGAATTCAATAAACCTGCTTTCTTCAAGCAAGA 13328 32 100.0 35 ................................ TTCCTCGATAGCGAAGTGCAGAAAAGGCTTGGCAA 13395 32 100.0 34 ................................ TGCTCGTATAGCCTTGCGTGCTTTCTCCATAGCT 13461 32 100.0 34 ................................ AGAAGAGAACCTACAGCAAAATCCTTTCTATCAT 13527 32 100.0 34 ................................ GGTATTGATTAAATGGTCTGGAGGCCGCTCACCT 13593 32 100.0 33 ................................ ACGACGACCCAAAAGCATGGGAAGCCAAACACG 13658 32 100.0 33 ................................ TGGTATCGGTTTACTCGGTCTACACAAGGCGGA 13723 32 100.0 34 ................................ ATTAACAACTACTGGCAGAAGAAAAGATTTAACG 13789 32 100.0 34 ................................ AAGCGCATCAATCTCTTGCTGAGCTGAATTAAGC 13855 32 100.0 34 ................................ ACTGAAACTCAGTTGGCGCAAATTCAAGCCGATC 13921 32 100.0 33 ................................ AAAACCACGCTGATTAAAGCGTTGGCAGATTAC 13986 32 100.0 33 ................................ ATTGTCCCAAATCTCAACCGTTGCCATTCATTC 14051 32 100.0 33 ................................ AAATGAGGGAGGCGTAAGCATCTCAAAACTAAT 14116 32 100.0 34 ................................ TTGCTCTACGCGTTGAATCTCTTGCGCTTGAATC 14182 32 100.0 35 ................................ GCGCTTCTTCGCTTCAACGAACGTATGCACATACG 14249 32 100.0 33 ................................ GACTGCATCAACGTTATTTGATGCCCACACCAC 14314 32 100.0 35 ................................ TTCCAACGTCTTGTATTTTGCAAAATGCGCCTGTA 14381 32 100.0 33 ................................ TCATTTGCGCTATACGCTTTGCCCGCGCTTTGC 14446 32 100.0 33 ................................ ATTAGCAAATGAAAAAGGAGATAGAAAAGCAAT 14511 32 100.0 34 ................................ TGCCCATTTGTTGGCTGAATCGCTCGCACTGCCT 14577 32 100.0 33 ................................ GGCCTGATGTTGTAGGGCTCAACGGGATCAGAT 14642 32 100.0 33 ................................ CATTGCTTTTTTGAACGTTAACCATTTAAAGCC 14707 32 100.0 34 ................................ ATTGCTGTTTAGTACAGTGCCGCGCGATACCGCC 14773 32 100.0 34 ................................ GTCTGATATGAGGCCACCAAGAACGATTGTTTGA 14839 32 100.0 34 ................................ TGGATTAAAACCAGAAGGTGGATCAATTGGTTTT 14905 32 100.0 34 ................................ AACAAGTGCAGAGTACCTTTGAAGAAGTATCGGT 14971 32 100.0 35 ................................ AGCAGAACGTCCTTGATGATGAGGGTAACGTTGTG 15038 32 100.0 33 ................................ CAATTGTCGGCGCGGGGGCATCGAATCAGCGCG 15103 32 100.0 34 ................................ TATCAATACACCAAGTACATGGAAGATTTCGTGA 15169 32 100.0 35 ................................ CAGACCGAAGCGGTTACGGTTAATCACCTGTAACA 15236 32 100.0 33 ................................ TATGACGCAGTGATCGCTGAGGCGGTCGCCCGT 15301 32 100.0 33 ................................ TGAAAACCAGAGGTGGTGATATTAAGTACGGTG 15366 32 100.0 34 ................................ TTTGATCATCAGGCCGTAACGCGCGCGCGCATCA 15432 32 100.0 33 ................................ GCTAAACGGAGTAGCCCTCCATCTCAAAGAGGT 15497 32 100.0 34 ................................ GCTTGCTTAAACGCGACTTTAAGCGCAGCACACA 15563 32 100.0 33 ................................ TTTGCATGAACTAGAACTCGCTCATTCTCGTTT 15628 32 100.0 34 ................................ CGTGACAACATGCGCCGCTTGGCGGAAACGGTCA 15694 32 100.0 34 ................................ CAAGCAACGAGTGCCTGTTTTGCGGACATCACAT 15760 32 100.0 35 ................................ AGTATCGCGATGCTCTGGTGTGCATCTTGATCGAT 15827 32 100.0 33 ................................ CAGCCAAATGTCATGGCCATGCCAAACTTCTGC 15892 32 100.0 34 ................................ GCGCCTTTTTCATCTGGCGAATCAACCAAAGCAA 15958 32 100.0 35 ................................ ACCACAAAGCAGCTGAACACGTAGTCACCTGCTGA 16025 32 100.0 35 ................................ AGAATATGAGGCACTGTAAGTTTTTAGCGCGTCTT 16092 32 96.9 33 .............T.................. TTACCATTGCTAGAGCCAGATTCTGTGCCGAAG 16157 32 100.0 35 ................................ ATGGCAACACTAGCGGCAATATGCCCTGAGTATTA 16224 32 100.0 34 ................................ ATTCGATTTTATCCCTCTATTCAAGAGAGTGAAG 16290 32 100.0 33 ................................ CAGACAAAACCAAGGGTTGCTTGCCCGTTGTTT 16355 32 87.5 0 ...A...............T........CT.. | ========== ====== ====== ====== ================================ ======================================= ================== 67 32 99.8 34 GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Left flank : CCATTTGTGATCAAAAAATAAGGAGCGAGCCATGATGGTATTGGTCACCTACGATGTATCCTTTGCCAGTGAAGATGGTCAAAAACGCCTCAGACAATTAGCAAAGGTGTGTTTAGATAATGGAGTAAGGGTTCAGTATTCTGTATTTGAATGCGACATAGATGCCGCGCAATGGCTGCGCTTTAAAAATAAGCTGCTGTCAATTTACGACCCTGAAGTAGACAGTTTGCGTTTTTATAAGCTCGGTAAAAACTGGCAAAACAAAGTAGAGCACCATGGTGCGAAAGAAGCCATAGATATATTCAGAGATACCCTAATTTTATAGTCGCTAGGCTTGAGTTCTCAGTAAAACACTGGGGATCTAGCGATTGCATAAGCTCTTTAAAAATATAGGAAATAATTATCTGTATAGATTCACACAAAGTAGTTTTGTGCTACCGCGCAAAGTTAGCGGTAACCAATAGAGTGTGTTAGTTTGTACGTGCCTCTAAGAAGAGGCA # Right flank : CGAAATCATCAGGCTATTGATGTCACTGATTGTAACCAGCGTGTTGTTTGATGTAAAAAAACAGAACCTTTAGCACTATTCCCGTATCTGCTTAACTATACTCTTTGCCTTCCTCAAGTATAAAGTGCTCAATCAAGTGACTTTTGATCAACTCTTGTATAAAGCCATTTACAGCGCCTCGAATAGCAGAAATCTGCTGCAAAGGTGGTACTGGATGATGTGGGAGTAATCAGTCAACACCTCATATAATAAAGAACCTCCCAGATTGTATAAATAGGCCGTTCTGGGCGCATAGAGTATATTTGCTTCATACATGGTTTTATTCACGTCCTATCACGGACGGCATCCTATCCAGCGGTATCGCACTACATTTTAGGCTACTAAAAGTTATCCGATGGGGAGGAGCAAGTCTGTGGTCGCAACTCACAAATGTCCATCTTCGAGCTAGCTGGTTGTAGCTAGATCAGATTTGTCCATCCAGACACATTTTTTCAAAGACC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA //