Array 1 226118-224747 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQFV01000021.1 Leptospira meyeri strain 201800270 contig_0007, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 226117 29 100.0 32 ............................. TCAGCAAGGTATGATTAATGGTTCCGAGTTCA 226056 29 100.0 32 ............................. CCCGTCTTTTTTTTTAACCAGCTGAACTTTGG 225995 29 100.0 32 ............................. GTATATTCTGCCACTGCAGGGTGTATTATTTT 225934 29 100.0 32 ............................. CATATTATGAACCGGGGCTTAGACATATTAAA 225873 29 100.0 32 ............................. TAACGGTCACCAGTTTTCATTTGATGGGTCCA 225812 29 100.0 32 ............................. TGTGATAGGACAAGTAACCAATGAACGAACTT 225751 29 100.0 32 ............................. ACAGTTTTTGGATGAAGTGAAGGGGAAGGGTA 225690 29 100.0 32 ............................. TCATCCATGGTGAATCAATCTGCACACCCTTA 225629 29 100.0 32 ............................. GTATTTGTTGCATCAGATAGAATGGCGATTAA 225568 29 96.6 32 ............................T GAACCAACGGAGAGAAAATAAGGTCTGATTTC 225507 29 100.0 32 ............................. TCGTCGTCTATGTCATCCAAATTGATGATCAT 225446 29 100.0 32 ............................. ACAACTAGTTTATTTTTATGAAGGTGCGATGG 225385 29 100.0 32 ............................. GTGAAAAACTTTTTGGTGCAATTGCACAGGAA 225324 29 100.0 32 ............................. GATAAGGGCATCTTTCACACCTGCATCTCTTT 225263 29 100.0 32 ............................. TATTCGGTCTCAGTTTCCATCGAAAACGTCCT 225202 29 100.0 32 ............................. GCGACAAGCTCGGAAATCTTATGTGGAATCGA 225141 29 100.0 32 ............................. TTAAAAACGGGGACTACGACACAAAAGAGCAA 225080 29 100.0 32 ............................. AACAAAGCATGGTTGGAAGAATGGCAAAGTAA 225019 29 100.0 32 ............................. TCATTGTAGACCAAGCGTCGGCGGTTGAATTT 224958 29 100.0 32 ............................. ATGGTGATGAGGACGAACCATGAACCTCTCAT 224897 29 100.0 32 ............................. GAGAGGCGAAGAAGAAAGAAGAAAAACATTTA 224836 29 100.0 32 ............................. ACTAGGATTGAACCGGAAGGGATCAGTGTTCC 224775 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 23 29 99.9 32 CTATTCCCCACACACGTGGGGTTGAACCG # Left flank : CATTCCTTTGGCCTTTGACGTTGTCAAAGAAAGTTCTTTTGATGTAGAACGTCGCGTTAGGTTTCATTGCCGTGATTATTTCAAAGCAGCAAAACTGATGAAACGAATTATACCTGATATGAAGGAGATCATTTATGGTAGTGATATTAATGCAGAAGGCGAAGATTTCCCAGAGGGGAGAGATGTCGCGATTAGCTATTGAAATTAAGGCTGGTGTTTTTATAGCTACTATCAATGCAAGAGTTAGGGATCAATTATGGAAACGAATCACGGAAGAATGGAAAAATCCTGCCATTCTACTTTATTCAACCAACAATGAGCAAGGTTACGAAATCAAAACCTTTGGAGATCCCGAAAGAGAGGCTATAGATTTTGACGGAATCACATTACTTGCGAAACCAAATTCTGCAGACGAAGGTGTCAATGATGAGGTCAGCGAAAGCGAAGATGACCACAATTAGCTTTACGAATTTTCTAGTAATACTAAACAAGTCTTTAGT # Right flank : AGCGAATCTTTTCTTTCTATTTATGGATAACGATTTTTTACATTGTATTCTATATTTTTTAAAAAGAACTTTCCATAAATATAATCCCCCTCCGGATAATTCCAAATGGCTTCCCCATAAGTAGGCACCTTAACCCCATTAAATTCTTTATAATCTCTGACAGGAGTTGACCAACGGGCCTTTCGTAAACTCCCATCATCTTGCAAAGCAAACCGATCATCCGATACAAACGCAACCAACTCGCCTATTTCATTAAAGAATAGAACAGCGGATACCCGATACTTCCCATTTTTAAAAAAAACTTTTGCAGATAAGGGACCATTTGCCTCCCAAGAGATTCTTTGGTCAATGAGTGCCGCAGGTGCAAATAAACAAAGATCGTTTAACACGGTAACGGTTTCCGCAATTGTCAGTTCTTCATTATCTAAATCAACGGCATTAAAAAGGGAAGCCACACGAACTAACATTGTTGCCCTTTCCTCGGAATAGGAATGTAGGAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTATTCCCCACACACGTGGGGTTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTTTCCCCACACACGTGGGGTTGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //