Array 1 35411-35645 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CIJB01000009.1 Streptococcus pneumoniae strain 19F/8, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                	Spacer_Sequence                                  	Insertion/Deletion
==========	======	======	======	===============================	=================================================	==================
     35411	    31	 100.0	    49	...............................	CATCCACAACCTCAAAACAGTGTTTTGAGCTGACTACGTCAGTTTTATC	
     35491	    31	 100.0	    31	...............................	AAGCTGACTTCGTCAGTTCTATCTGCAACCT                  	
     35553	    31	 100.0	    31	...............................	CATCCACAACCTCAAAACAGTGTTTTGAGCT                  	
     35615	    31	  93.5	     0	G...A..........................	|                                                	
==========	======	======	======	===============================	=================================================	==================
         4	    31	  98.4	    37	AACTTCGTCAGTTTCATCTACAACCTCAAAA	                                                 	       

# Left flank :   TTTTGAAAGAAGCCCTCAGACTGGTCTATTTGGATCACTCTGACCACCTCTTTCACCAGACCGACTACCATATCCACTACTTTGAGATGAGACAACGACAAAGTCGTATCCTGAGAAACATGGCCCAACAGATTAACACTTGTCACCTTGCCGCCAGTGAAAGCCTGATCTTAGCGCAACTCTTTTCAAAAATTGCAGGTCAACTGAGCCAGACCAATCCTGCTTCTGATTTGCTAGATGAAATTGAACGTTATCTGGAAGTCTTCCGGAACCGCAGTCTGCCCAAGACAAGAGAAGAATTTGAAACCCGCGCCACCCTTCTTCAACTCCTACGTGAAGCCAAAACCTTCATCCAAGTAAAAGTTGATTTTTACCAAAAATATAGACAGTAATACTCTTCAAACTACGTCAGCTTCACCTTGCTGTATATATGTTACTGACTTCGTCAGTTCTACCGTAGATATATGTAACTGACTTCGTCAGTCTTATCTGCAACCTCA
# Right flank :  ACGGTGTTTTGAGCAGCCTGCGGCTAGCTTCCTAGTTTACTCTTTGATTTTCATTGAGTATAAAAAAGAAAACTTCAGACCAATCCACAAAAGGTGAATATCTGAAGTTTTCTTTTATTTATAAGTAATCACCATAAAGGTTAATAGTAGAATAAATAAAGCCAAACTCACCAATAAAGTGAGCACCTTGACCAAGGTGTTGCTCTGCCAGTAGCTTGGTTTACCAATATTACTAGTGGCATCCATGGAAAATAGTTGATTTTGACGGGGTTGTATAGTTACCAATACAATCAAAGCAAGAGATAGGATAATAGCTAAAACAATTAGTATTTCAATCATAGATCTACCTCAAAATTCCCAGCAAAGTAAAGAGCAAACCAATCAGAATCATTAAGCCCAGTAAAAGTGAAAAAGTTTTACTAATCTTCTCCCCTCGGGTTTCTTTTTCCTTCTTGATGGGTTTTTGTTTCAACTCTTCCATGCGGCCTTCAACGTCTTTG

# Questionable array : NO	 Score: 2.53
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:-0.04, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     AACTTCGTCAGTTTCATCTACAACCTCAAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:64.52%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [0.00,-1.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [58.3-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0.37   Confidence: LOW] 

# Array family : NA
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