Array 1 30818-33008 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXHV01000004.1 Moraxella catarrhalis strain C031 B620ctg3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 30818 28 100.0 33 ............................ AGTTTCTCATATCGACTTTGTCAGCTAATTGCT 30879 28 100.0 32 ............................ AAATTGGCACGACCGCCGATGGCATTTGGGGC 30939 28 100.0 32 ............................ AATGTCTTGCCAGCGAGCGTGGGTAGTACCCT 30999 28 100.0 31 ............................ AATAGTGATAGACCGATAACTACTACTTCTG 31058 28 100.0 34 ............................ CAATTATTTTTAAAGCTTCTACCAAGTCTTGTTT 31120 28 100.0 32 ............................ ATAATAACTACTGCGAACATACTATTCTCCTC 31180 28 100.0 33 ............................ TAAAGTACCTAACTCAGTGTCTGCACCTATGGC 31241 28 100.0 32 ............................ ACTACTCTGTAGTTCGTAAGAACTCTAGAGCT 31301 28 100.0 32 ............................ TTGCTCAATGGTAGCGTTCACAAGCTTTTCAA 31361 28 100.0 32 ............................ TTTTGATGCCCACTTGCCCTTGGTATGCGGTA 31421 28 100.0 32 ............................ TATCTCATAAATAAATGGCTCACTTGGCGGAA 31481 28 100.0 32 ............................ GTTATTTAACTCTAGCTATATTATATGATTAT 31541 28 100.0 32 ............................ CTTACTATTCCTCATTACTTTGGCGATAATTT 31601 28 100.0 32 ............................ ATTATTCAGTGTTTCGCTAATGCGGTAAGTTG 31661 28 100.0 32 ............................ TTGGATATACCAATATTGCTCAAAAATATCGC 31721 28 100.0 32 ............................ GATAAACTGACATTGATTTAAATCACTCATAA 31781 28 100.0 32 ............................ TATCTAAGATAACGGTACCGAATAAGTATTGC 31841 28 100.0 32 ............................ ACAAATCACAGATGATAATAGAATAAATATGA 31901 28 100.0 32 ............................ GTCTTCGAATACGAAGTTTAGGTTCTTAACGT 31961 28 100.0 32 ............................ TCCATCGTATTCACGGCGTTCCAACCATGTAT 32021 28 100.0 31 ............................ GTAAATGACGCAAATTCCACATTTTCCCTAG 32080 28 100.0 32 ............................ AATTTCTAAATTATGTAAATAAAATTTCTACG 32140 28 100.0 32 ............................ ATTATTCAGTGTTTCGCTAATGCGGTAAGTTG 32200 28 100.0 33 ............................ ACAATCGAGCAAAAAGCTAAATATTCAATTCTA 32261 28 100.0 32 ............................ ATACATTGATGGCGATAATAACAAAGCTAAGC 32321 28 100.0 32 ............................ GACGTCTAGCTGTATTAATAGCTGCTTTCTGT 32381 28 100.0 32 ............................ TCTATATCTTGAAATTCAACCGTCATAGTAAG 32441 28 100.0 32 ............................ TGCACTTAATAAAGCGGTTGGCGGCTCTGCTA 32501 28 100.0 32 ............................ TAGAGATAGTCTTTGATTATGTTGATTCTCTT 32561 28 100.0 32 ............................ TTGGTAAAAGACAATATCATTGATACTAATTT 32621 28 100.0 32 ............................ AAGCCATCATTGAATACCCAAAATCACCAAGG 32681 28 100.0 32 ............................ TTTTTGTTCGATTGGGGCAAATGCTTGTTAAT 32741 28 100.0 32 ............................ TCATATTGTTTGGCACATAACTGGCTTCTTAA 32801 28 100.0 32 ............................ TGTGTCGATTAAAGCAGAATTGATCAATCATC 32861 28 100.0 32 ............................ AACACCGTCCGCCAGCTTGGCGTTGATGGCTT 32921 28 100.0 32 ............................ TTTTAACGGCAGGGCTAAAATTTGCGTTGCTG 32981 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 37 28 100.0 32 CTTCACGACCGCACAGGTCGCTTAGAAA # Left flank : GTGCCTGTGCCAAGTAAAATTACTGTGGTATTGGCGATGGGGATATTATAATAGTGGTTTTGGTATTTCGTTTCGGTCAGATATAAGATACGCCCGTCTTTTTGCATGACTCGGCAATGCTCAAGATAAAATAAATTCGCCCGTTTGGAATGTAAAATTGCTTTCAAATCGGTCGGTTTGAGCGTATTCATAATGATACAAATCCATGTTTAATGATTCAATTTTATCCTAACAATTTTCAACATCATTTAATATGATTTTATTGGATTATAAACTAAAAATAAATTTATACCAATCATTTTTTAATTGTATTTAGCGATTAAAATGTTTTAAGATAACCCAACCAGAAGATGGCAAAATAACGGATTGACCCTTTATTTTTTACTATTTAAAAACTTGAATATTTTCAATAAGTTATAACATTCAGATTTTTGATTGGGTTTTTGACAAATTTTATCATAATGGCTTGTTATTTCTTATTATTTTGGTTTATAATAACT # Right flank : ATTTCGTTCTACAACTACGCTGATTATTTAAAATTTTTGTACCAATCCCTTGAAAATTTTATCCTTAACCATTATGAAGATGGGGAATTTATATTAACTTTTTTGGGGTAATTTATGACCGAGCAAACCACCGAACAAACCACCATGGAAGAGATTACGACTGAGACAACAACCGAGCAAGTCGAAGCACTTCACAGCCAAATCCAAGCACTAGAAAGTGAAGTCAAAGAAGCCAAAGAGACTGCTGCGCGTGCCAATGCCGAAAGCTATAACGCCCAACGCCGCATGGAACAAGAAACCGACAAAGCCAAAAAATTTGCACTACAAAAGTTTGCCAAAGAGCTTTTGGAGGTGGTTGACAACCTAGAGCGTGCCATTAAAGATGCTGAAGAGACAGGTGCAGATGACGCATCACTTGAAGGCATTCGCCTAACACATAAAGTACTGCTTAGCGTCCTTGAAAAAAATGGCGTCGTGGCCGTGGGTAATGTCGGTGATAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCACAGGTCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [81.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //