Array 1 800122-798780 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849648.1 Acinetobacter junii NIPH 182 acLrq-supercont1.5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ===================================================================================== ================== 800121 28 100.0 32 ............................ TCTATCCACAAGCTCGTTGTTGACTTTAACCA 800061 28 100.0 32 ............................ ATGCTGATAATCACATCTTCAACGTGTCGAAG 800001 28 100.0 32 ............................ TACTGGATTGCTGTATTCATCTGAAACTATGA 799941 28 100.0 32 ............................ TTGTAGTTGGTGATCTCGCTTCACTCGTTGGG 799881 28 100.0 32 ............................ AGCGCCCATGATCTCGTATTGAGTAGGGTCAA 799821 28 100.0 32 ............................ TAAACGATAGGCAAGATCATTACCTGTATTTG 799761 28 100.0 32 ............................ CTCAAAAAACAGCTAAAAAACCCTGTTATGGT 799701 28 100.0 32 ............................ AGTTGGGTACCATGTCAGGTATTCATGCTGAC 799641 28 100.0 32 ............................ AAATCCAAATTACAATCCAACTAGCCCTCCCA 799581 28 100.0 32 ............................ GCATTCAGGACATGAAACTTCAATCTTGGTTT 799521 28 100.0 32 ............................ TTTTAGGTAGTCTGATAACCGAAAGAATATTT 799461 28 100.0 32 ............................ TGGCTATTTCTGGAAATTAGCAATAATCGCAA 799401 28 100.0 85 ............................ AGTCAATGACAGCAATTTCATTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCA 799288 28 100.0 32 ............................ TGCATAAGGAACAAAAGCAGAAAGCATTTTCA 799228 28 100.0 32 ............................ AGTGGGCTTTTTCTCTGTTCTCGTTAAACATT 799168 28 100.0 32 ............................ CTGCAAAGCTTGTCATCATCCAAAGAGCTATG 799108 28 96.4 32 .....................A...... AGTACATGACTGGGCGTCACATGGCTCTGATG 799048 28 100.0 32 ............................ TAATGTATTCCATTGTACGCGCATTAGCTTTT 798988 28 100.0 32 ............................ AACAATTGTTGCTAATGTCGGAATTCCTATCA 798928 28 100.0 32 ............................ AAAAGCAAGAAAAAGAGGTGATGCTTATTCAA 798868 28 100.0 32 ............................ AGCTACAGTGAACGGCATCTCATCTCGTCTGT 798808 28 92.9 0 ..................T.......C. | T [798784] ========== ====== ====== ====== ============================ ===================================================================================== ================== 22 28 99.5 35 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : TGGAGTGAACGCAATTTGACGTTGTAAATTACTCATTTCAATTGTATCAGCATCTACAATCGTAATTTTTCCAACACCTGCTCGTGCGAGTAGCTCCGCACTAGTACACCCTATTCCACCAGCTCCAATAATCAGTACATTTGCTAATTTTAATTTTTCTTGAGCTTCAATATCCCAACCATCAAGTAAGATTTGACGACTATAAAGATGCATTTCATCATTAGTTAATTCAAATTCGTTTTCTGGATGAATTGACACACTGATTCTCTTACTAGCTCTAAAGACTTTAGATTTTAAGTATATGAATGTACTAATGGAAGATAATTTTTTCATAGATGCATTTTGGCTTTGACTATATCTTGGTTTTAACCCAATAATATAGGCACTCTTTAACAGCATAATAAAATCAATTACTTATGAATTGAGATTAAAACTTTGGTTATTTTATTTTTTTAGAAATAACTCTATGTTTTATTTTGAAATTTTAGGTATATTTTATT # Right flank : CTTTGAACAAAGATACCACCCATTGATTTGGTTACCCTAGTCACTTATATTCTTAAGAATCAAATCCGCTACGCCTTGTGGATCTTTCCACATTGGGACATGTCCCCAATCTTTAGGTTCTAGCCAATTTACATGGTCTGGCAGCTCAGATTTATTTTGACAGTCCTTCTTTCTCAAAAGCCAATCTTTTGTACCAAAGGCAATAGTTAAAGGAACTTGAATATCTTTGCCCCCGATAAAACGTCCAACATTTGCGAATGTTCTATCGAAATCTGTGGCTTTGGAAAAATCATCAATCGAGTTCAAAGCATCTTTTCTAGAAATGTTTCGACCTCCAGTTCCTATCGGGATAGATAAAAGCAACTCTCGAAACAGTGCAAATCCCATCATCTGTCTTGATATATTAGGCATGAATTTAATCGCATTTCTTAAACTAAAAAATACCATCTTTACATGTGCTGGGGATTCATCCCACAAACCTGCGGGTGAAATTGCGACGA # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.18, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-88.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 89766-90156 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849651.1 Acinetobacter junii NIPH 182 acLrq-supercont1.8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 89766 37 100.0 35 ..................................... TCTTAATTTGTATATTTCTTAACCTAAAAGCTCAA 89838 37 100.0 35 ..................................... TTTTGGTTTAATCAAGGATTGGATAATCATCATAG 89910 37 100.0 33 ..................................... GACATTAGATGATTAATCATTTCGCGATAAATG 89980 37 97.3 33 .......A............................. AATACTGATTTCTTTTGTTTGCAAGGAATGCAC 90050 37 97.3 32 .......A............................. GACGTCATTGCACGATCTGCTACCTGAGCTAA 90119 37 91.9 0 .......A.......................G....G | C [90153] ========== ====== ====== ====== ===================================== =================================== ================== 6 37 97.8 34 GTCTGAACAGACTTCCCTGTAGATAAGGGATTAAGAC # Left flank : GATGACAGTTTACTTTATTACTCGCCATGAAGGTGCATTAGAATGGGCTAAAGAGCATCATGTACATTACGATGTGCATTTTACTCATTTAGCAAATTTTGATGAACTGCGTGCTGAAGATACGGTAATCGGGACTTTACCTATTCATTTGGTTGCAGACTTGCATGTGCGAGGTATTCGCTATGTTCATTTATCCATGCATGTGCCTGCACATTTCAGAGGTTTAGAATTAAGCGCACAACAGTTACGCGATTGTCATATCCGATTGGAGGAATTTTATGTTGTACGCCCTAACCCAATTTGATCAGCACGCCCGTGTATGGGATTACAATTCATCTATTGACATAGTATTCGCACGAAAATTATCACAGTATATTGTTTTTTATATTTATAAGAAAAACTGTGAAACATTTTGTCATACAGAAACTTTACTGATACATACTTTGAAATATTTAGCCTCTATAAGTCTTTGCTTTACAGAAGAAAAAAATAAAGGTAGA # Right flank : GGAACAGCAAAGCAGTGCTTTGCCCGAGTGCAAGACGAAAGCTTTGCTTGAGTTAGGCGTGAACCCTCGATAGTAACTGTTTTGGATACTTCCCTAAATAAGCAATTTTAAAAGCCATCAAGACACCATCTTGATGGCTTTTTATAAGCTTACGTTTTAAAAATAAATCAAAAATATCTCTTATTCTCTATACACCAAGCGAACTAGAGAGTAAGAAAATGACGTGTTATTTAAATTTCGAAGATATTGCATTAGGCTTAAGCGTACATGCCTATAAACGACGTACACAACGCGGTATACAGCAACAACATATTGCACATTTATTACGTTTTGGCCGTAAACAATTTCACCGCCATGCGATTTACTACAGCATTGGTCATAAAGAAATAAATAAGTATGCCGATCTTTGTCCGATGCTTAAAAATATGAATGGAATGCATTTGGTCACAGCCACTAATGGCAAAGTCATGACCATGTTCCGCAACCGGGACTTCAGCCTG # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAACAGACTTCCCTGTAGATAAGGGATTAAGAC # Alternate repeat : GTCTGAAAAGACTTCCCTGTAGATAAGGGATTAAGAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.90,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 2 105656-105832 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849651.1 Acinetobacter junii NIPH 182 acLrq-supercont1.8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================== ================== 105656 37 100.0 32 ..................................... ATCTGTAGAGTATTTAACTCGGAAAAAGATTT 105725 37 100.0 34 ..................................... GCCTTGACAAGAAATATGTACTTCTTCTGTATTG 105796 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ================================== ================== 3 37 100.0 38 GTCTGAAAAGACTTCCCTGCTGATAAGGGATTAAGAC # Left flank : AAGGCATACGCTTTGCAGTTCCAAGCAAAATAGTATCCGCATGATTTGGGTAGATTTTTATAAAAATAATTCGCTTTGACTCATGTTGAGTGAGCATTGTGATTTGCTCTATTAGTTGTTTTTTTAAGTCAAAACTTAACTGACACTCAAAAACTGATTTTTGTTGATGTATTCCATAGGCTGAAAGTAGTTTAAAAATTGCAGAACGTAATTTAGGACTACTTACATCATACATACCCAAATAGCTTTTCATCTTTAATTCTCATATTTTGGTCATCATCTAAAAACTAAAATGAATTTTGGATACAGGACATAAAATGCAAGCTTACAAAAAACGTATAGACAGACAATCATGTTGTTTTCTACCACAAAATATTGTTTTTTATACTTATAAGAATAAATGTGAAATATTTTGTAATACAGCAGATTTACTGATACATACTCTGAAATATTTATCCTCTGTAAGTGGCTGCTTTACAAAAGAAAAAAATGAGGGTAGA # Right flank : CATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAAAGACTTCCCTGCTGATAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.90,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA //