Array 1 77005-74114 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFAM010000021.1 Rufibacter sp. XAAS-G3-1 NODE_18_length_81261_cov_31.9889_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================== ================== 77004 30 76.7 42 ....T.TA..A..A...T...........C TTAAATGCCGCCTTTGGGCAGATTTAGAATCTGCTGCAGCTC T [76976] 76931 30 96.7 39 A............................. TAGCAAAAGCCCGGAATTACCTACGGAATAGATTTAAAA 76862 30 100.0 38 .............................. TGTTGGGTGAAAGACCCGAACCTGCCCACGACCAGGTA 76794 30 100.0 38 .............................. TTGGTGGCGGTACTTCTTCGGCTTGGGCTTGGCCTCCA 76726 30 100.0 38 .............................. GCGCGTGCTTTGTAGTCAATACCGAAAGCGTTTCCAGG 76658 30 100.0 38 .............................. GTACCTCGCATTGGCTAGGTTCATCACCACGATCAACA 76590 30 100.0 36 .............................. CGGTTGATACTATCCCGATGGCCGCGCCCACGCCAC 76524 30 100.0 35 .............................. CGCCTTTTTGGCGATGTCAAACAGTTCTTTCCCGA 76459 30 100.0 35 .............................. CGCCTTTTTGGCGATGTCAAACAGTTCTTTCCCGA 76394 30 100.0 35 .............................. CCATGCAAGACTACTCACAACTCTCAGTCCTACTA 76329 30 100.0 34 .............................. CTGAGACAGCATTAGCAACCGGGCTCTATATCAG 76265 30 100.0 36 .............................. AAAGTAGAGTTTCAGGCAGATAAACCACTAAAAGCC 76199 30 100.0 38 .............................. TTGGGAAGATGCGACGGTGAACGGGGTGGAAGATGAAA 76131 30 100.0 33 .............................. CAAATACCGGCACGTTATTGGCCTGGTTATTAT 76068 30 100.0 38 .............................. GGCCACGGACAGCGTACTAATCTTAGAGCCCCAGTCAA 76000 30 100.0 35 .............................. TATGAAATACTGCTGAACCTGTCTTACTTCAGCAA 75935 30 100.0 36 .............................. GCGCTTACCGCCTGATACTTTCGCGGTGGTGTAAGA 75869 30 100.0 35 .............................. TTAAGGCTTCTGAAGAAAGAATGCACCCGATTCAA 75804 30 100.0 36 .............................. TGGTAGCGGTGCCTTCCTGAAGCGTGTACTTCGTTA 75738 30 100.0 36 .............................. GTTGTTGGCATAGGTATCGCGGGAAAGAATCATGTA 75672 30 100.0 37 .............................. CGTGCTTTTGCCAGTTTGAAGCCCATGTCCATCAGGG 75605 30 100.0 37 .............................. TTCTTTTTTTGGTAGCGCAACAGGTCACGGGCATGCT 75538 30 100.0 37 .............................. GAGGCGTGCGATCTTCTGATAACTTCCGTGGTTCCTA 75471 30 100.0 37 .............................. GGAAGGCGAAGGACGATAAGGCGAAGTACCTTATACA 75404 30 100.0 36 .............................. TGAAGGCGCGGGGAACATCGCGGTCACCAGCGATTC 75338 30 100.0 37 .............................. GTGGGCAGAGGCGCACGAAGACGAAAGCATCCTGCAA 75271 30 100.0 37 .............................. TCACCCAGAAACTAGAAGAAGCCATGGCCCTTATCAG 75204 30 100.0 35 .............................. TGGGAAAGCCGTGTTTTGCTAGGTGAAAGTAATGA 75139 30 100.0 38 .............................. TCTGTTGTAGAGTTCTCGAATTGGAATGGAGCAATTTT 75071 30 100.0 37 .............................. TGACACGAAGAGAAGAGACACCTGATTGAGTTTTTTG 75004 30 100.0 37 .............................. TAACTATTGGTGATTCTTGGCGTTAGATGAATTACAG 74937 30 100.0 37 .............................. CTTTATAGAAATAATCCTACGTTTTCGGGTGTTTACA 74870 30 100.0 35 .............................. GATTCCCTTGCTGCCCATGGCGGAGGTAGTCCAGC 74805 30 100.0 35 .............................. TAAATGGCTGATAAACATCACCCAGCGAAAATGAC 74740 30 100.0 36 .............................. TGCCCAGAACAGACAGAGCTTCCTGCAGGATCTTCG 74674 30 100.0 37 .............................. CATATCAAAGCTTACATTCTGCTTCCCGCTCTCCATT 74607 30 100.0 37 .............................. ATTGTCAGAGCGGCACCGGATGAAACCTTTTCTATAC 74540 30 100.0 36 .............................. GGCCTATTGCTCGCCTAGCAGCCATATTGAACCCAA 74474 30 100.0 35 .............................. CTTTTTCCGACTCGTCAACTCTTTCTGGTATTCAG 74409 30 100.0 37 .............................. TTTCCTCCCTCAGTTTCTGGGATTGGGCGTTATACTC 74342 30 100.0 37 .............................. GCGTTCTCCCTGAAGTTACTCCGCAGCATCTTCTTGC 74275 30 100.0 37 .............................. GGTCAGTCGCAGCACCTGCGGTGTGTAAGACCGCTCC 74208 30 100.0 35 .............................. CTTGAGTTTGCCTTTCACGTACTCCATTATCTCAG 74143 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================== ================== 44 30 99.4 37 CTTTCTATACCACTGAGGTGCAATTGAAAT # Left flank : CCTTTTGTGAATGGTCTGGGTACAGGCGTGTGGCGCTCTGTGGATAGACCTATCCCGGCCTACTTTAGGTCAGGCAACTTTCTCTTCATCATTTTAGACCTTAGGTATGCTGGATAAACCATAAGCCCAGGCGGTACACCGCAAAAGGTATATACTTATCCGACACGATACGGAGTAGGGGGGCTTCAAAGGGGGTAGGGATACCGGTATTTGAAAAGAGGTGCATTCTCTTTTACTTGCCAGAATGCCTCATAGGGCAGGAAATCTGGTATCGTTGTTCAGACTCTTGCGATATCGGTGTCCGAATAGTGTCCGAAGGGCAAGAAAAAAGCTCCTCAGAATGAACTGAGGGGCTTTGTAGTAGTCCGTAGGAGTGAATTATCGAACTTTATCCACAGTGATTTGGCTGCTTTAGAAGATTACTTAAAGTTGTAAAAAAACGCTCATAATACTGATAGCAATCCTGTCTTACGTAAAATATGCCTCCAAGCGAGTTTGTC # Right flank : CAACCCTAAAATTAGAAGAAAAAAGCCTTTTCCTGTACATAGGAAAAGGCTTTTCTAGAGAAAACTGCGCTAAAAAAGCGTCAGGCGGTAGTAAGGTAAAATCACCGGGCAGCCGACGACTGGCCTCATGATCTGTTTTTGAGGGGTTTTCATAAAAACAGCCTTGAAACGGACAAGCACTTGCCTCTACCCGCAGGAAGTAGACACCTCACCCGACGACTAGAGAAAACGTTGCGGGCTGCCTTTGTCGGTGCCGAGGACGTGGCGCTCGTGGTAGCGTTCCTCGCGCATGCGGTAGATGACCACGCCGTCGCCTTCCTCCATAAGTTGGTTGGCCTCGTGGCGGAGGCGTTGGTACTGGGCCTCGGTGAGCTCACCCTCAAACACCGAGTTCTGGATCCAGGTGAGATACTTCCGGAAGAGCTTCAGCATTTTGCCCACGCGCTTCTGGCCTACGTCATACACGGCAATAAAATAAGGCATATCAGTTTAAGTTTTTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:0, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCTATACCACTGAGGTGCAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.20,-2.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : NA // Array 1 37353-27855 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFAM010000008.1 Rufibacter sp. XAAS-G3-1 NODE_5_length_340010_cov_33.4339_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 37352 37 100.0 36 ..................................... CGGCTCAAGCTTATTGGCTGAAGAAAGCCTGAACAT 37279 37 100.0 36 ..................................... TCCGGTAAATGATATGATACCCCCCTGAAGGTGTAC 37206 37 100.0 37 ..................................... AAAAAGGCGCACGCTGCCTACGTGGAGCGAGCCAAAG 37132 37 100.0 36 ..................................... ACGGCAGAACCCCCGATAAACGGCCTGTGTGACACT 37059 37 100.0 36 ..................................... CTTCCTCTTCCGGCCAATCAATATCAACGCCCCAAT 36986 37 100.0 36 ..................................... TGAACTTGTAATGCCGGTGCACGGTACTCGACTTCA 36913 37 100.0 36 ..................................... ATGTGTACACGTCTGGCAACGCCACGGCGCAGAACC 36840 37 100.0 36 ..................................... CATGACCTGTACCATGCCCACGGCGTAGATGCTGAG 36767 37 100.0 38 ..................................... ACCCAACCTGATAAACCGTTGCCCGTTTTCCTGCACAA 36692 37 100.0 38 ..................................... CGGGATACTTCTTATTTCCTTATTACGGGTGAGACTAC 36617 37 100.0 35 ..................................... CCGCCAATGAAACTAAGTATCTTCGCCCCGGCCTC 36545 37 100.0 36 ..................................... TGCCTTGCCCGTCTTACAGGCGAATGGGCTACCGTT 36472 37 100.0 35 ..................................... TCCTGATAGGGAACACCGGCAAAGATGCCGAAACC 36400 37 100.0 36 ..................................... CAGGCATCTATTTGTTTCTTGCTACCTAGCCGGGCT 36327 37 100.0 35 ..................................... ATCATGGTCAGGCTTTCTTGCGCCAAAGCCTGTGA 36255 37 100.0 38 ..................................... ACTTATTTTCTTAATGTTGTCAAAGCTAAACCCAGGGG 36180 37 100.0 35 ..................................... TGGCCGGTATAAAGACCTGTCACCATCCCGTAAAG 36108 37 100.0 36 ..................................... CCAGGCTTATTTCCAAAGAACAGGGCAAATCACTTT 36035 37 100.0 36 ..................................... CCTGCTTTTGTCAGGGACAAAATATCTGTTCCGGTT 35962 37 100.0 36 ..................................... TTATCAGCGCAAAGTACACGCGTAAGAATAAAATCT 35889 37 100.0 37 ..................................... TCTTTATCATTCTCTGGGTTGAAGTCTATTTTTGTGA 35815 37 100.0 36 ..................................... AATTGGTGGCTACTTTTAGAAGTGTTTCAAATTCTT 35742 37 100.0 36 ..................................... GGCAGTCAAAGCGCAAAGAGCCGTACAGATAGTACT 35669 37 100.0 36 ..................................... TCAAAACCTTCTTAAAAGCCTTCTTTTTGGCGGCTT 35596 37 100.0 36 ..................................... TCCATGTTGGCAACAAGCTCTTCAATCGGGCTGGAA 35523 37 100.0 36 ..................................... ATTGACATTATACAATACCCCTCACGTATTCCAAAA 35450 37 100.0 36 ..................................... TAAGCTTTATGTAGTTCATACCCGCGCCCAACTATT 35377 37 100.0 36 ..................................... GATAGCCTACCCTTAGAGTGCCGGGGTTGTCGAAAT 35304 37 100.0 35 ..................................... ACTAATGTTTCTATGAGCAGATACGTGCAGAACTT 35232 37 100.0 38 ..................................... AAGAGGCAGAAAAGGGGGAGGAAGCATTTCTAAAATTT 35157 37 100.0 36 ..................................... CCTAGCCCCGGTAGACTGGGGATTGCGGGTGTTTGA 35084 37 100.0 36 ..................................... CATGGAATGCCTCCACAAGCGGGAATATCACCTCAT 35011 37 100.0 37 ..................................... CAGGGTTGTGCCGCCCGAAAAATCAAAGGTAATAGAT 34937 37 100.0 36 ..................................... TTAAAAGAAGATCTTGATTGGAAGCTAATAGAAGCG 34864 37 100.0 36 ..................................... TCGAAATTAGGGAGTTCCCCAGGCAAGGCTACCGTT 34791 37 100.0 36 ..................................... CTAAAAACAGCACAATGAAAACCGCAGAATTTCTAA 34718 37 100.0 35 ..................................... TCCCGCCAAGACTACCGCCCGGTAAACTTGCTATA 34646 37 100.0 36 ..................................... CCGCAGAGGCTAGTTTGGGTTCGTTCTACTTTGATA 34573 37 100.0 36 ..................................... AATTCAGGTACGTAAGTAACTTCAGCCGTTTCTTCA 34500 37 100.0 36 ..................................... GCAGTCACGCATACAGGCCCTGGCGTAAGCAGTATT 34427 37 100.0 35 ..................................... GCGGCCTCAGTAGGTTTCACCCCACCCCTGGTCAG 34355 37 100.0 36 ..................................... CCGGCATCACGCCCTCGTTCGGCATAAGCAGCGCGT 34282 37 100.0 38 ..................................... TACCACTTCTACGGAGCCGCAAACTCACGGCCCAACGC 34207 37 100.0 38 ..................................... GATAGATTGAAGCGGTCTATGCCATGCGTCGCGCAAAA 34132 37 100.0 36 ..................................... ATTCCAAATTGATAATTCGTTCATCAACAAGTTGCT 34059 37 100.0 36 ..................................... CTGTGTTGTTTTCCATGTGTAAAATATTGGTGAATA 33986 37 100.0 36 ..................................... GATCCACCAACCGTTCCTGAAACAACATCAATACCA 33913 37 100.0 36 ..................................... ATTTTCAGTGCCCATGGCTAGATGTTCTTATAGGTG 33840 37 100.0 36 ..................................... CATCCGTTTTTCATTTGGATCATGGCGGGTACAAAG 33767 37 100.0 36 ..................................... CTTTCTGTTCCATAGGTTTTCTCATTTTCCAGCTCT 33694 37 100.0 37 ..................................... TTTGCTTTCCCGCTATAACCATATCACCTGGAACCGC 33620 37 100.0 38 ..................................... GGATACCAGCCTCTTTCCAATGAACATAGGTTTCTGTA 33545 37 100.0 37 ..................................... CTGATTTCTTCTTTTCGCATGAACGCAATAACCTTGT 33471 37 100.0 35 ..................................... TCGGATTTGATGAGCTGACCCACTTCAGCAAAAAG 33399 37 100.0 36 ..................................... TGAAAACCATCTATTTACGTAACGAAAATTACGATT 33326 37 100.0 36 ..................................... CTACATCTTCCGGAATACCTGGCTTCACCTTGAAGC 33253 37 100.0 35 ..................................... CAGCGTATTATATAAGTAATACATCGAAAATAGTA 33181 37 100.0 38 ..................................... CCAACTCCAATCGGGCCAGTTATCAGAACAGAAACGCC 33106 37 100.0 36 ..................................... TTGACTTTGATGTCATAGTTCTTAGGATGCCCCCAA 33033 37 100.0 36 ..................................... AAAAAGAGAATCTTGATTGTATCAATATCTAAAAAA 32960 37 100.0 36 ..................................... CCTCATAGGTGCGGAACTTAGTCGCAGCAAAAGGCA 32887 37 100.0 36 ..................................... TGCTTTCCATGCGGTGAAGAGGTAGAGCAAAGCCGC 32814 37 100.0 36 ..................................... GTTATCTTCCTAGCAAATGAAAGAAGGCTTTCCCCT 32741 37 100.0 35 ..................................... GCCCTGAAACCTTTCAATTCCTGGGAGAAGAGAAA 32669 37 100.0 36 ..................................... GCACCCGCATACACTCATCAAACCCTGCTTTGATAT 32596 37 100.0 37 ..................................... CTTATTCCCAAGTCCTGCAAATACTCAGAAACCGATT 32522 37 100.0 37 ..................................... AGGGTTGCGTTCCATGCCTGTTGGGCGCCCTGAACCT 32448 37 100.0 37 ..................................... GTTATTATCGATGTGGATATTTTGAATGTGTTCACAA 32374 37 100.0 36 ..................................... CCGTCCAGGGAAAGGATCTGCTTGGTGTTGTCCAGG 32301 37 100.0 36 ..................................... AAACATCGAAAGAACAGCGAGCAAGTCACTTAAAAC 32228 37 100.0 35 ..................................... CGCTGAATTGAAATCAATTCCTTCACGCAGTCGGT 32156 37 100.0 37 ..................................... TTCTTTCCAGAAACCTGTTCAACATCTGACGCTTAAT 32082 37 100.0 38 ..................................... CCATTTCGCGCAACTTTGTCTGGTCTGCATGAGCGTAA 32007 37 100.0 36 ..................................... AGTTGCTCCTCAGCAGAGCTTATACGTTCAGAAGAA 31934 37 100.0 37 ..................................... CAAACCTTTGCTGGTTGCCAGCCACAAACAAACGCCG 31860 37 100.0 35 ..................................... CGCCAACGCTCTTGAAATCCAGAAAATCGACAAAG 31788 37 100.0 36 ..................................... ATCATTGATAAGTTTGTCCATTGGCAGCAGCTCCGC 31715 37 100.0 36 ..................................... TCAAAACCAAAGGCGGCGTTTCTGGCCACGTTGTAA 31642 37 100.0 37 ..................................... AATTCAGCTTTGTATCTGATTTGCGCACATACTAACA 31568 37 100.0 38 ..................................... AATTTAAATAATGATTAAGTTTATTTCCCACACTGCCG 31493 37 100.0 36 ..................................... GCGTTCAGCGGCATTTTTGCCAGTTTCGCCAACGTC 31420 37 100.0 36 ..................................... GAAACTTACTGGTGTCTTTCATGGTGCCCCCTAAGC 31347 37 100.0 36 ..................................... GAAACTTACTGGTGTCTTTCATGGTGCCCCCTAAGC 31274 37 100.0 38 ..................................... GAAGTGTTTCAAATTCTTCTCTTGTACAAAATTCTACT 31199 37 100.0 37 ..................................... ATCTTCGTAACAAAGATATGTATTCATTTACATACAA 31125 37 100.0 40 ..................................... ACAACAGAGTAATAGAGTTCACCGATTTAGGTTTATTAAA 31048 37 100.0 36 ..................................... AGCTACTTCGCGAGAAAATCACTCTTTGGCAGGGGA 30975 37 100.0 36 ..................................... AGTACGAGGGGAAGGAATTTACCGTGACAAGAAACG 30902 37 100.0 36 ..................................... AAATACCCCTTAGTTCCGCTTCGCTCATATCTCCGC 30829 37 100.0 35 ..................................... TGAAGTCTTCGGCCAAGTCAATCTTACCGGAGATT 30757 37 100.0 37 ..................................... CCCTGTACTTGAAATCCTTTGTCTTTGCTTGGTAGAA 30683 37 100.0 36 ..................................... TTTTTCTTCTCTTCCAGCACTTCTTCCAGAAAAGGC 30610 37 100.0 35 ..................................... ATGAAAAAAGGGTTCTCTATCGCTAGAGAACCCTT 30538 37 100.0 36 ..................................... TAATGCTTCACTTTGTGCCCGAAAATGAGGCGTAGG 30465 37 100.0 36 ..................................... CTTCTAAGTAATTCATTGATTTCTTTCTGCATTTGC 30392 37 100.0 35 ..................................... TGATGATAGCTCTGATATTGGTTTCATCAATAAAA 30320 37 100.0 36 ..................................... TCCACCTTGCCGCTGATGTCCACATTGGCAAGGCTA 30247 37 100.0 36 ..................................... AGATAACTGTAATTATGCAACTACCTAGCAAATTCG 30174 37 100.0 36 ..................................... TGGAATTCAGACATAGGCTCTGATGATGGGGAATTT 30101 37 100.0 40 ..................................... CATCAATGTTTTCAAGTTTGGTGAGTTCTTCCCTTAAGGT 30024 37 100.0 37 ..................................... ATGTCTGAGAAAGAATAGAGGCTAATGTTGTCATGGA 29950 37 100.0 36 ..................................... GTAAAGAACGTCGGCGCGGCGGCGGTGTCTTCCTTG 29877 37 100.0 37 ..................................... AACCCTAGGGCAGCCTGATGCTGGTACGCAGGGCCAT 29803 37 100.0 38 ..................................... AAAAGAAATAAAAATATGGCATCATTACTTAGAGGGAC 29728 37 100.0 37 ..................................... CCAGATGGTATCAGGCGAACAGCAAACTGACTTCTTT 29654 37 100.0 36 ..................................... TGCCCACGCAGACCAGAGCAAGTTGCGCGCAATGGT 29581 37 100.0 39 ..................................... TAACCTGGAGAGGGAGGCAGAGCAGGCCCGTAGCTTCAT 29505 37 100.0 40 ..................................... GAGATAAGCCTAAGCCTAACACCACAATGTTCGTGAAATA 29428 37 100.0 37 ..................................... TGGAGCAGAATATGAAAAAGTGTGAGCGTTGTGGAGG 29354 37 100.0 36 ..................................... GAAACTGATGCTGCTCCAGGCGTATGCGCACCAGCG 29281 37 100.0 35 ..................................... ACAATGGGAAGGTGGAATACCAAAAAGGGACGGTG 29209 37 100.0 36 ..................................... TTTTCTGGATAGCCCGGCGCACATGGAAGATATTGC 29136 37 100.0 35 ..................................... GCGAGTTTGTTGATCACCTTTCCAGCTCTCTCCAT 29064 37 100.0 40 ..................................... TAAGTCTTTTTCACCGATCAAAAATGAAGTCTTTTTTGAC 28987 37 100.0 36 ..................................... TCTAAGCTTGCCCTATCCACTTTCTAGGGTCCATCG 28914 37 100.0 37 ..................................... GCTATAAGAGCCTATAACCTTGATTCTATAATAGCAA 28840 37 100.0 35 ..................................... GTGTTACTTCCAGCACTCTTCTGGTGTGCTTTGTT 28768 37 100.0 36 ..................................... TTTCAGTCAGCGCCTTCATGGCAATGGTGAGTTGTT 28695 37 100.0 36 ..................................... TGCTCTCAACTACGCTCCTATGAAATTTGGAAAAGA 28622 37 100.0 36 ..................................... GTCTTGCGAACTCCATGGAAAGCTTCTGCTCAAACT 28549 37 100.0 36 ..................................... TATAAAAAAAGACCATTGGAACCCCGCCGTGGGCTA 28476 37 100.0 38 ..................................... AACAAGTTCCTTATTATGATCCAGAAGCGAACCGAGGT 28401 37 100.0 35 ..................................... TCGTCCTGGGCCTCCTTCTCCTGGGCGAAGGGGAA 28329 37 100.0 36 ..................................... CTGTCCTGGCTGTGTTTGGCGACATGAAACCGTTAT 28256 37 100.0 36 ..................................... AACCTTTGCGGCTGCTGGCAAGAAACAAGCGCCGCA 28183 37 100.0 35 ..................................... TCTCCTTTTGCAACTCCACCAGAGAGATACCTAAG 28111 37 100.0 37 ..................................... ATCTTACGCAGATGGAAGAACTGGACATAGAAGAGAA 28037 37 100.0 36 ..................................... CCTCTTTGTCGCGCTCTTTGGTGATGCGCATACAGT 27964 37 100.0 36 ..................................... TGCCGGTGACACCCAGAAAAAGGAAATCATAAGCCG 27891 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 130 37 100.0 36 CTTCCAGTAGCTTTTCCAGAAGAACAAGGATTGAAAC # Left flank : TCCGCTGGATTATAAGTTTGCCCAGTACAAAGACAAAGTATACGAGACGTACCGCACGCAACTCTACTGCTATGCTTGGCTCATAGAAAAGAATTTCGGAAAAGAGGTAAACCGCGGGTACTTGGTATACACCAGGAGCCAGAATAAACTAATAGAAGTACCCATCACTATTACAGACAAACAGGAGGTGGAGCATTGCGCCAACCAGATATACACGATTATTGACCAAAACTATTTCCCCAAGGCTACCAAGTGTCGCAAAAGGTGTTTAGATTGCACATACCGGAATATCTGCATCAAATAGATCCTTTCCGGATACAGATTTATTTTTGGCAACCCAAAAACAAGGTGTAACTTATTGATTATCAAAAAGAAATTTATTCGGAAAAACCGTATAAAGGTATGAAATTATGCTCCTTGACATATTGTAAAACAGGAAATTGGGCTTTAACAAATAACAGATATCTAACTGAAAATCAACCGTTACCGAATAACCACGA # Right flank : GGATCAAGATGATTTGCTTTCCCAAATCCTGAAGCTTTTGGTAAGCATCCGCCAACTGTCGTTGGGCCGCATCGAGGCGGATCTCAATCGTGCACACCTTTGATAAATTCTCCATATAACACAGTAATGCAGAAGGGGTTGAATGTCGCAGTTTTGGGGATAGACTTCTTTAGGGCAAATAAGAGTTGGCGAAATAGAAACTTTTCACCCTGTTATGGTTGGCGAACCGTCAACTATCTGTTATCTTTGCCGTACAATAATTCAAACGGTAACAGAGATGAACGTACTTAGCTTCCCCACCATCAAGGCTTACTTTGAGAAACACGCCGCATCAAAAGCATACCTTCTGGATTGGTACTATACAACCAAGAACTCCAACTGGAACAATATGAACGATCTGCGGAATTATTTCCCAAGTGCCGAGATGGTCGTAGACAACAAGGTTGTCTTTAATATCAAGGCTAATGACTTCAGGCTCGTTGCGATAGTGTTATTCAGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCAGTAGCTTTTCCAGAAGAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : NA //