Array 1 3342-806 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHONG010000021.1 Phocaeicola vulgatus strain DFI.4.81 GCOEKEKI_21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 3341 33 97.0 31 ................................T TGTTAAGGTAAACACCCTCTGACTTCCCATT 3277 33 97.0 31 ................................T TATAGATAAGCTGAATGCCCCACGCTATAGG 3213 33 100.0 32 ................................. AGCGTTGGTTTCCTGCCAACACCACCAGTTTA 3148 33 97.0 32 ................................T ATGATGAACGCTGAACAAAACGCTGCTCTTAC 3083 33 97.0 33 ................................G CTTATTCCGGTATCCGAATATAGTTGCGCAGAT 3017 33 97.0 33 ................................T CGTCTGCTTGCAATGACGATAGTACTTCGATTA 2951 33 97.0 33 ................................T CTCTTTCTTGTCTATAAACGCACAACTCACACT 2885 33 97.0 33 ................................C TCTCTTGCTACAGCTGTTTTGCAATCTGCTGGA 2819 33 97.0 32 ................................T TCAGCAATTGGCTAGTGAGAAGTCTGAACTTA 2754 33 97.0 33 ................................T CTCTGGGATTTGAAAAATACTAATATTCTTAAG 2688 33 100.0 33 ................................. TTTTACGATAACTAGTGCTCATCGTACTCCCGA 2622 33 97.0 32 ................................T CTAATACGATACAATATAATGTATGTGCGTAT 2557 33 97.0 31 ................................T TTAAAGTAAAATATTATAACTTTGTCTAAAA 2493 33 100.0 33 ................................. TTGGTATGGTTGTAGTATATCACGTTTTTAAAG 2427 33 100.0 32 ................................. ATTGTCCATTGTATAGCATGTTGTGCAGCCTG 2362 33 97.0 34 ................................T TTGTCGCTGTTTTTAATGTGGTAAAAGCCATTTT 2295 33 97.0 33 ................................G CTTCGTGGCTTGTAATTTGCCCGCCAATCGTTT 2229 33 97.0 34 ................................T TTTCTTGAGTATCTGTTATGCTCTAATGTTCATT 2162 33 100.0 33 ................................. TTTGGTGATCGTAATCGTCATCAGGTGATTGAT 2096 33 100.0 33 ................................. TAGATATTCGGATAATGTCCATGTGTTTGATCA 2030 33 100.0 32 ................................. AGGCACTGTGTCGTATGACCGTGAAATTAAGG 1965 33 100.0 33 ................................. ACTGCGTTACGCGAATTATCCGAAAGATTACTT 1899 33 100.0 33 ................................. CTCATTATAAAATTATTATTTACCAACACAAAA 1833 33 97.0 32 ................................T ATATACTTCATAAGGATGCTAACCCGTTTATC 1768 33 97.0 32 ................................C GTTACCAAAGATGGCTGCAATCACAATCAATG 1703 33 100.0 33 ................................. CTGAACGCTTAGTTTTATGAATGAGAGAAGAAA 1637 33 97.0 34 ................................C TTCTCCACAGGGTAGGGAACCTCTACCTTTTTCT 1570 33 97.0 36 ................................T CGGCCATAGCAATGGCAAGATAATCATATACCAGTG 1501 33 97.0 33 ................................T TTGTTCGGCGCCGTTTTTGCCCACGAGGCAAAA 1435 33 100.0 33 ................................. TGCTTATCAAGCTGTGGCGGAACGTGGAATGAA 1369 33 97.0 34 ................................C CGACGTGGTAGATGAGCCTTTTTTAGCAAGCAAA 1302 33 100.0 32 ................................. TTCTTTAGAACAAGACTTTGAATATCATCATA 1237 33 100.0 34 ................................. AGCTGATGTTGCTTTTGTTTGGTGACAGAAGCAA 1170 33 97.0 34 ................................C ACCATACAACAGCCAGCAAGCGACAGAAATCAAA 1103 33 100.0 32 ................................. TAGCAGATCCCATCCCTTATAGATATCCTCCA 1038 33 100.0 33 ................................. CTTATAGAGATTTGACAAACAGATATAGGGTAT 972 33 97.0 33 ................................C GTCTGTCTGTGGAGATACACCCGGATGCGGAAT 906 33 100.0 33 ................................. CGCAATCCACCACTATCATAGCTCGGATGAACT 840 33 93.9 0 ....................A.........G.. | TA [817] ========== ====== ====== ====== ================================= ==================================== ================== 39 33 98.2 33 GTCACACCCTGCGTGGGTGTGTGGATTGAAACA # Left flank : ATATTGACGATTATCCGGTATTTCTTATAAAATGATTTTTAATTATGTACATTCTTGTGACTTACGATGTGGATACTACAAGCAAAGAGGGGGCTCGCCGTTTACGATGTGTGGCCAAGGCTTGTCTGGATTATGGACAGAGGGTGCAGAACTCAGTCTTTGAGTGTGTAGTGACGGAAGCGCAATATTCTCTTCTAAAAGGGAGAGTTAGGGATATTATTGATATGTCTCTTGATAGTGTTCGTTTTTATATTCTTAGTAAAAATGAGAATAAGAGGGTGGAAGTAATAGGTGTTGAAACGGCGTATAAACTTGAGGAGGCTCTTATAATATAATGCGAATGTGGTGTGTTACAAAAAAAGTAGTATCTTCGCATGTGTTAATAATCAGTAGATTAAATTATTTGTAGGGTATTTCTTTGTTATGAAGTTGAATAATAATGATGATTCGCATAACAGTGGATTAAATTTGCTGATTTATAATATGTTATTAGATATAGA # Right flank : TTGTTCACTCGTTGGTCAAGTTTATGGAAGAATTGTAAGCATTCGGCCTCTTGTGTATTTCTCTTCAAGCTGTTATAAAGTCAAAAGCCAAACGAAGTACGTTAGGCTTTTGACTTTGTTATGACTGGAAAAAACACGCACAATCCCGGATGCTTATCTTTTGTCTGTCTTCTTTTGTGGTTTCACCTAGGTGACAATACATTGGCATCTAAGTGGAGAGGCGTAGTCACCCAAGTGATACGCTTGCTTCACCTTGGTGAAACTATAAATTCAACTAAGTGTTTCAAAGCAAATATATTATATTTTTATTATACTATCCCTTGTCGTTTATTTGTTATATTGTTGGTTATTAATGTATTATTATCTGTTTGTATCGATTGTTTTTTCTTGTCTTTATAAGATATATTAAAACATAAACTAACATGAAAATTGGTATAATTGACCTTTGTAAACAAATAGAAGATCCTAGTATGAACCGCAAGAAAGTCCATAAAATGGAA # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.57, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCCTGCGTGGGTGTGTGGATTGAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //