Array 1 104093-99662 **** Predicted by CRISPRDetect 2.4 *** >NZ_LRBO01000007.1 Aeromonas veronii strain AVNIH2 NODE_15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =================================== ================== 104092 29 100.0 33 ............................. GCTCGGACATGTTCGACCAGGTACACGCCAAGC 104030 29 100.0 32 ............................. CCTTCGGCGGTAACCTGGACGCAGCGCATTAG 103969 29 100.0 32 ............................. TCGTCTGAACCCGTGAGTAAGTTCTGATGAGT 103908 29 96.6 33 ............................A GGAGACGGCTGAGGGAGGAAGCAAGGAGGGAGC 103846 29 100.0 32 ............................. AGAGGTCTGAAATTCGGTGTTGAGATCCTTAA 103785 29 100.0 32 ............................. GATACGGCTGAGGGAGGAAGCAAGGAGGGAGC 103724 29 100.0 32 ............................. CTTGGCCAGCTCACGCTCATACGTGGACAGGC 103663 29 100.0 32 ............................. GTATACCTGGAGGAGCAGGTGGACTGGCCGAA 103602 29 100.0 32 ............................. GATACTCTTGCCCCTCAGACATTCCGTGACAA 103541 29 100.0 32 ............................. TCGGCGGCCAACTGGTCATCGTCATAGACCGG 103480 29 100.0 32 ............................. GGCGCTTTGCTGCTCGCTTCGGTGCTGCTTCT 103419 29 100.0 33 ............................. GCTGCACGACTGTTCGACAACAAATGCCCAGCC 103357 29 100.0 32 ............................. CGATGCCGAGCGCATCGTATTGCTCGGCAGTG 103296 29 100.0 32 ............................. GTGCAGGGGCATCTGCCGATCGCCCTGGTGCG 103235 29 100.0 32 ............................. CAGCTGGTGATCAGGTTAGCGATCGATCTGCA 103174 29 100.0 32 ............................. ATGCTGATGCTGTACGTGAAATACACGGGTTG 103113 29 100.0 32 ............................. TATCTGCTTTTGTGACAACTCCGGGCTCTAAT 103052 29 100.0 32 ............................. CACTCCCATCACCTGCTGAGTCGCATCAAGCC 102991 29 100.0 33 ............................. CTGTACGACCAGAATGGTCGGCTGTTTGCCAGC 102929 29 100.0 32 ............................. ACCTGTTCGATGTGGCGCGGGTGTACGTGACC 102868 29 100.0 32 ............................. GCGACAACACCGGATCAGGATTTAATGATTTC 102807 29 100.0 33 ............................. AGTGTAACAATGGTCTCCATCATGGTCGGCTAC 102745 29 100.0 32 ............................. GATATTGCTGCTGATCATGCTGCGGCGCTGGG 102684 29 100.0 32 ............................. CGAACCGCGATTTTTCAGCTGATAGAGGCGGC 102623 29 100.0 32 ............................. GCGACCTGCAATTGCACGTTTTTTTCGATGGT 102562 29 100.0 32 ............................. GCTTTGTAGCAATTCACCCCGTCCAGGTGTGA 102501 29 100.0 32 ............................. GTGGCCTGCTATGGTCGGGTGGTGTCATCGGT 102440 29 100.0 32 ............................. TGGGTGAGACGGATGACGGGGCGCCGATTGAG 102379 29 100.0 32 ............................. TCTGCGCTGCGCTGGTTGGGTACACCGCCGGT 102318 29 100.0 32 ............................. TACCGCACCTGGTTTGATTCCATGATGACCTG 102257 29 100.0 32 ............................. CAATATGATCATCGGCAATGAGATCATCGCCA 102196 29 100.0 32 ............................. ATGATCTCGCGTCCGGCAAAAAGCAGATGGGG 102135 29 100.0 32 ............................. CGGCGCGCCTCGAACTCAGCCCGGGATTCAAC 102074 29 100.0 32 ............................. GCCGATCATTGGGCGATCACTCCGTCTGTCAT 102013 29 100.0 32 ............................. TGTATGAACCGCTCCGGAATAACACCGTATAG 101952 29 100.0 32 ............................. GATGGCGGGAGCGATGTCCCCGGCCAGTTTAC 101891 29 100.0 32 ............................. TTAGCCGTACCCAGACCAGCAGGAGAAATCCG 101830 29 100.0 32 ............................. CTGCCAACCGACTGATAGACCGGGAACTTGAG 101769 29 100.0 32 ............................. TTGGCTTTGACCTGCTCCTCGCTCAGGCTGAA 101708 29 100.0 32 ............................. ATCACCCGCTCGGTGGCGGGGAAGAAACTGCG 101647 29 100.0 32 ............................. CAGGAATTCACAATTGCGCTCAAGCGGTTCCC 101586 29 100.0 32 ............................. GGATCGGTGTGGTCGGTGCGCCGAGCGTTATC 101525 29 100.0 32 ............................. ACCACGAGAAAATCCCGCAGGCCATCGCGCTG 101464 29 100.0 32 ............................. TGGAAGCCAGGCGACCGCCCAGCGCTGACCCA 101403 29 100.0 32 ............................. GCCGCTGGCCTGGGAGTGTTTGGATGACGCCT 101342 29 100.0 32 ............................. TGGTGGCGGATGAACAACCTCTACATGATCGA 101281 29 100.0 32 ............................. GGCTTGCGCTCCGATTTTTGAGCACCAAGCAA 101220 29 100.0 32 ............................. GTTATCAAGGCCATCTGCATCGCAGGCCTTGC 101159 29 96.6 32 ..............T.............. GGGTACATGGAGCCGTGAGCGCCAGCACACCA 101098 29 100.0 32 ............................. GCTATACATGAACGATAGACACCAGGATGGGC 101037 29 100.0 32 ............................. CGATGTTGCTTGGCGCCCGGCTCGTTGCCGGA 100976 29 100.0 32 ............................. ATATCTACCGCCAAGGTGGCGCTCTGTGCGTT 100915 29 100.0 32 ............................. CAACAGGCCGTGGCCTGCGCCATCCTGCGCCG 100854 29 100.0 32 ............................. TCTGGTTCTTTACGATAACGAAGCGATCATTT 100793 29 100.0 32 ............................. GTTACCGAGCAGGGTCAGGAGCTGACGGCCGC 100732 29 100.0 32 ............................. CCCTCTTAAAACGCCTCTGGGGGGTTGCTTGG 100671 29 100.0 32 ............................. GCCGATCACACTGTGGTCGATGCCCAGGGGAA 100610 29 100.0 32 ............................. CGTCAGCCGCGAAGAGTACCGCCGCCTGGATA 100549 29 100.0 32 ............................. GGATGTGCCGCGCCATTATCACCCTGGCGGAA 100488 29 100.0 32 ............................. GGGGTGTACCTGCCTCGGGGAGGCATTCCAAA 100427 29 100.0 32 ............................. AGGTGGTGCAGGTGATGCTGTCGGTCGGCTTC 100366 29 100.0 32 ............................. TGATTGTGACCGTCAGCAAAGACGACGAGGAA 100305 29 100.0 32 ............................. CTGGGCGCCAAGACCCAGACCCACATGATTAG 100244 29 100.0 33 ............................. TTTGCGGAGGAATTCACTTGCACTATCACCAAC 100182 29 96.6 32 ............T................ GTAGTTGCTGACTCTGCCAACGCACAGATTAA 100121 29 100.0 32 ............................. TTTCTCCTGTTAGCTATCTCGTTGGTTTGCTA 100060 29 100.0 32 ............................. TTCACGTTGGTGGTGAAGGCCACCAAGGCGGC 99999 29 100.0 32 ............................. TACCCGGAGAAGGCCAAGGAGGTGCGTACCGG 99938 29 100.0 33 ............................. TCGACCACGTAGCCGGTCAACACCAGATCGTTC 99876 29 96.6 31 ............................A GTCTCTGCTGTGGCGTGGCGAGGCGCCATTG G [99849] 99815 29 93.1 32 ...T....T.................... CTCAGTGTCGCAGGATCGAGGAGGAACACTTG 99754 29 86.2 35 .A.........A.C..T............ CGCAGTTGGCCTTGCATTGCTATCAAGGCATCCAG 99690 29 86.2 0 .A............T.TT........... | ========== ====== ====== ====== ============================= =================================== ================== 73 29 99.3 32 CTGCTCCCCGCGCACGCGGGGATGAACCG # Left flank : CCCGCTAATTGAAGAGGTGCTTGCTGCAGGGGGGATCACCCCGCCTGAGCCTCCCAAGGATGCTCAGCCGCCCGCCATTCCCGAACCGATCGGCATGGGGGACGCCGGTCACAGGAGTCAGTGATGAGCATGTTGGTCGTCGTGACCGAAGATGTGCCCCCACGTTTGCGTGGTCGGCTGGCTATCTGGTTGCTGGAGGTCCGTGCAGGTGTGTATGTGGGAGATGTCTCGCGCCGTGCACGAGAGATGATCTGGCAACAGTGTGAGGCATTGGTTGAGCAGGGCAATATCGTGATGGCATGGCCTGCTAACAACGACTCAGGGTTTGACTTTCAAACCTTGGGAGCAAATAGAAGGATGCCGGTGGACTTGGATGGCTGCCGGTTAGTCTCATTTCTACCCTTTGAAAATCAATAGGTTATCGTTCTTTAACAATCAGGATTAGTTGGTAGCTTTTTATGGTTTGAAAAAGCCATTTAAATCAATAACATCCATTAAGT # Right flank : TATGTAGATGTTGAGCTTGATCCCGCGCTGTGCCCTTCCCCACGCTCGTTGGGATGGAGACCAGCTACAGCCACAACTCTAAGTACTCAAATGTCTACCAGCTAATCAACGATGGCCACAGTGCGGAGGACGCATCCCGAATGCTTTGCCTACCGCTGCGAACGGCTAACGACATCCTGGGGATCGAGGAATAAACAAAGGGGCTCACGGCCCCTTTGTTATTGGTTCATCCAGTGTAACCACTATCTCGACAGACTCACCGAAGTGAAGGCGGGCGAGTCTGATTAGTTCTGCCACATCTGGGTAGTTGTCACGGACGTACTGACGCCGTTCCTCCAGTGACATTTCAGCGGACACGCGGCCCCCCTTTTTTCAATTCACTTGGCCACCCCTCAAGAGTCGTAAACCCTTAAAGTTTAAGCCGTTTAAGAATCCTTCCAACTTTTACTTCGCCCCTGCGTGCGAAGCAAACGCAGAGGGGCGTGCTAAAGCCGCTTGAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //