Array 1 96967-102608 **** Predicted by CRISPRDetect 2.4 *** >NZ_VCPB01000003.1 Corynebacterium striatum strain CSc20 Scaffold3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 96967 29 100.0 32 ............................. GAGTCTCCAGCGTCGTCCGCTGCGGCTTTCGC 97028 29 96.6 32 ............................G CCCACCGGCCACAGCACCAGCCGCCACAGTCA 97089 29 96.6 32 ............................T CGTGGTAGGTCACTTGCCTTGTAGCACTCATA 97150 29 96.6 32 ............................G GCGAGACCGGCAGCGTTGAAAATGTTTCGTGG 97211 29 100.0 32 ............................. GTCGCGAAGGAGTCTGTGGGCATTGGTGGGGA 97272 29 100.0 32 ............................. CCACAGCAGAAGAAGCTCGCGATGAGGAGCGA 97333 29 100.0 32 ............................. CATGACTAAGACCCTCGCAGACATGACCCCAG 97394 29 100.0 32 ............................. ACCAAGAGCGATTTAGTGCGCTGCAGGTTCTC 97455 29 100.0 32 ............................. CCTGTCCCGCGAGCGCACAAACACCGTGTCTG 97516 29 100.0 32 ............................. ACGGGGCGCTGATCCTCCGGCACGCTTTCTGG 97577 29 100.0 32 ............................. GACTACCTCACCGCTAAAGAAATGGCAGTCAG 97638 29 100.0 32 ............................. ACACCACCGCCGGTACAAATAGGCGGAGACAC 97699 29 96.6 32 ............................G TTCCGGCTCTCCACGGTATCCACCAGTCTTAG 97760 29 100.0 32 ............................. TTCGACCGCGCTGCCCTGGCGCTGCCGAGCTC 97821 29 96.6 32 ............................T AAGCGTTCCGTTGCGTTTTCCACACCGGAGCT 97882 29 100.0 32 ............................. GTCCAGGGGCTCGCCGTCGCGCGTTGCTTGTA 97943 29 100.0 32 ............................. CGGAACTGCCGGGCCTGAACTTTCCGTACCCG 98004 29 96.6 32 ............................G ACACACGGTAGTTACGATTCCTCGCTGTTTAT 98065 29 100.0 34 ............................. TCTCGCGAGGGTCTCGCGAAAGGTCATCGGCGAA 98128 29 100.0 32 ............................. CTGGGATTGGGTTGGTGGCAGCCATGCGTCGA 98189 29 100.0 32 ............................. ACCAAGAGCGATTTAGTGCGCTGCAGGTTCTC 98250 29 100.0 32 ............................. GGTGACGAGTTCTGCCGGGTCAAGGGTGAGGT 98311 29 100.0 32 ............................. CCACAGCAGAAGAAGCTCGCGATGAGGAGCGA 98372 29 100.0 32 ............................. TTCTCGGATGTCAGTACCAAGGTCAAGTGTTT 98433 29 100.0 32 ............................. GCGGCGGCGTTTAAGAACGCGGCCGACAGCTC 98494 29 100.0 32 ............................. ACATTTGTGATTAATTGATGTCGCCCCAGCGT 98555 29 96.6 32 ............................G AACCAGAAACAACAGGCATAATTTCTCCTTAA 98616 29 100.0 32 ............................. AGCTCGCGACCATCGCCCCGGTACTCTTCGGA 98677 29 96.6 32 ............................A ATGCGGCGGGCTTCTTCGTGGGTGATTTTGCC 98738 29 100.0 32 ............................. TTGACACCCCATACAAAGTTGGCGACACCGTA 98799 29 100.0 32 ............................. ATCACGGTTAACGGCGCGCTCGACGCCGATCG 98860 29 100.0 32 ............................. AACGCCTCCGCGAGATATGCTTCAATGCATTC 98921 29 100.0 32 ............................. GTCTCCGAATTCTGGTATGCGGTGATAAGGCC 98982 29 100.0 32 ............................. AATATGGTCAAGTGAAGCGCTCATAGCATCAG 99043 29 96.6 32 ............................T AAGTCGGCAGTTAACACACCTTATTTTCCGTA 99104 29 100.0 32 ............................. CAGTGCCGTCCGCGCCCTTGGGTCCAGCCGGG 99165 29 96.6 32 ............................T ACGCCGCACCGTATCAGCCAAGACAAAATCCG 99226 29 100.0 32 ............................. AACATTAAGTATGGCGCACATTTTTATAACAA 99287 29 100.0 32 ............................. CCAGGAGGTCGACGAGGACTTTGTGGAAATCG 99348 29 100.0 32 ............................. CACCCCACGAAGCGTCTCAGAACCAACCTCAG 99409 29 100.0 32 ............................. GGACAAGTCGACGTCTCACGTGCCCCGGTATC 99470 29 100.0 32 ............................. GACGAGCGACGCGGGATAGAGTCGCCACGCTC 99531 29 96.6 32 ............................G TCACCGTCCAATCAGCACGGCCCTCAAGAGAA 99592 29 100.0 32 ............................. AAGGCGTGTTTCTTGTCCGGGGTGGTCGCGGT 99653 29 100.0 32 ............................. TGTTGTCTTTGGTGATGATGTGACGCTGCCTG 99714 29 96.6 32 ............................G CGAAGGGGGCTAAAAAGTAATGGGCCTGGGAA 99775 29 100.0 32 ............................. ATAAGTCGGTAGGCCGGTACGCACCGCCCCGG 99836 29 100.0 32 ............................. GGAAAAGTGCAGGGGCGATTTGTTGATGATGA 99897 29 100.0 32 ............................. TCTTCCGCGGTGGCGAGATACCAGCTTATGCC 99958 29 100.0 32 ............................. TTACAGCCGGTTACAATCCGGTACCAGTACAG 100019 29 100.0 32 ............................. TACTAGGGGCAGGCAGCGATGCCGCACACAGA 100080 29 100.0 32 ............................. CACAACACCCTGAACACTAGTACGCACATCAC 100141 29 100.0 32 ............................. TTATAGGGGCGCTGGAAGCGGCGGAGCTTCTA 100202 29 100.0 32 ............................. ACGCATCGTCCGCCGCATGGTCAGCACCCCAG 100263 29 96.6 32 ............................G ATTCTAGGGATGCGGCTGCTGGGTTGGCTGAG 100324 29 100.0 32 ............................. ACCTGGACCGCATTTGCATCACTCATGAACTT 100385 29 100.0 32 ............................. ACCTACATCCTCTCTTTGCTGCGCCGCTGGGC 100446 29 100.0 32 ............................. GTCGCCGGACACGGCCACACCAGCGTCCACAC 100507 29 96.6 32 ............................T CAACCGGCGACATACGCACAGAGAAACGGAGT 100568 29 100.0 32 ............................. ATGCAGGCGGGCGGCTGGGCATTCACCCTGAA 100629 29 100.0 31 ............................. GACCTGGTGACGGTAAAAACGGGGGTAATCT 100689 29 100.0 32 ............................. TCACATCCCTAGCCCAATGGCTCTACTTCACC 100750 29 100.0 32 ............................. ACCACCCAAATCAAACCCCAAATCTGGGCCGA 100811 29 100.0 32 ............................. GCTGGCTATACGTGCAGGAAGTCGGAATCTAC 100872 29 100.0 32 ............................. GACGGTTAACGTCGGCTGATTCTCGTCAGGCT 100933 29 100.0 32 ............................. CACCCATACAGCCCATTGACCGCATCAAAAGA 100994 29 96.6 32 ............................G CATAAGAACCTGACCAGCACGCTAGGAAAGTT 101055 29 100.0 32 ............................. TCGCCGCGCCGTGGCGCGCGCACCCCTTGCTC 101116 29 100.0 32 ............................. CGTCTGATTGGCAGACTGCGCGTCTGTTGGCG 101177 29 96.6 32 ............................G CGTCGGCCACAATCTCCACACCCCTACTGGAG 101238 29 100.0 32 ............................. TGTGTGGTCGCGGGTGAAGGCTGGAATGCTGT 101299 29 100.0 32 ............................. AATTCCGAACACTGTGCGCATAACATCCCACG 101360 29 96.6 32 ............................G AATGGACCGTACAACAGAACTTAGAGATTCTG 101421 29 100.0 32 ............................. ACTAACCCCGGCCATGCTGAAGACATTACTAA 101482 29 100.0 32 ............................. TGGACGGCGGCGTTAACGTACATGCCGGAGTA 101543 29 100.0 32 ............................. AGGAATATTTTGGGGGGAAAGTGACCGCCTGT 101604 29 96.6 32 ............................G TCCTCAAGGGTGACGAGTTCTACCGGGTCAAG 101665 29 100.0 32 ............................. GTCTGAAGGATTTGGGGGCCGTTGATTCTAAG 101726 29 100.0 32 ............................. TCTGGGCCGACAAATAACCCCCCCAACAGCCC 101787 29 96.6 32 ............................T CACGTAGCCGCCACCAGATGACTCAAAAGTAC 101848 29 96.6 32 ........T.................... GAGTCATAGAGCTCATTAAAGCACCCTGAGTC 101909 29 100.0 32 ............................. TCGACGATGAGAACGATTCCTGGATACTGCGC 101970 29 96.6 32 ............................G CACGGAAAGGTGTTCCAGGGTGCGGGCTACCA 102031 29 100.0 32 ............................. CGTAACCGTAGAACTGGAGTAAAAATGACCTC 102092 29 100.0 32 ............................. GAGTTAGAAGCCGAGGTTGGCCGACGGGGCAT 102153 29 96.6 32 ............................G CCTCGCAGGATGCGGCGGCAGGCTCGGCTTCA 102214 29 100.0 32 ............................. CCGGTGACTTACTCCACGCTGAATGAATCCCG 102275 29 100.0 32 ............................. CAGTGGCCCTGGTAAGCCTCTCCGCGGGACGT 102336 29 100.0 32 ............................. CGTTGGGTGGACAGCGGACGGATTAAACCCGT 102397 29 100.0 32 ............................. CGACATCGCGCGACTTTGTGGAATCCCATCTC 102458 29 100.0 32 ............................. GCGCCCAATTCTCTCTTTTCCGCAAGATCCGG 102519 29 96.6 32 ............................G CCGGAGACCCGCGTAGCTGGCGTGCCGCCGCT 102580 29 96.6 0 ...........................G. | ========== ====== ====== ====== ============================= ================================== ================== 93 29 99.1 32 GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Left flank : GTGGACAATAGCGCCGAGTCAATCGATGTAGAGCTGCTTTTGTGGAACGAACTTGAAAATATTGCGGCTGGTGCTAATTGGTCAGACTTTGATCGGAGTTCTCCATGATGGTGCTCGTCGTTACTGCATGTCCCGCCGGCCTGCGCGGTGACCTTACTAAGTGGTTACTTGAGATTTCACCTGGGGTGTTTGTGGGTCGTCCATCAGGGCGCATTCGTGATCTGTTGTGGGAACGTTGCGTAAGTTTGTGCAAAGATGGCCGCGCTATTTTGGTTTTTAGCTCCGATAATGAGCAGGGGTTGGATTTTCGCGTTCATCGCCATGAGTGGGAGCCTGTGGATTTTGATGGTGTCACCCTCATGCGAAGAACCACTGCGCCATCAAAAGCTCAACGCCGTACCGGCTGGAGTGCTGCTCGAAATGCTCGCCGACACTGACCGTTACACCATAAGTCGGATCTGCTAGCCTCGTTTTTGGCTCTTCCACGCTGGTCAGTAAGT # Right flank : CTTCCATTCTGCTGTGGAAGGTACAGAAAGAAAGTCTGACCTGTGAAACGTGGGGATAAGATTTTTCTGTTAAGAAATACCCGTTTGCCCCACAGTTTTCCGCGGATTTGGAAGAGTGTTTTCTGCGGAACGTAGTTTTCAAAATCGGACCACACGGTCCCTACATCCTCATCACAAGATGCGAGCAATCCTCATTTACGCTTTTTCGCAGAGGAAGCGGATGACCTGGACGTACTCGAGTCTGTTGGAAGAAATGCAACATGGTGCTGGAGTGAAACCCTATACAGCGTCGAAGCGACATTGGTTATCTTCGCATACATTGATGACGTCCATGTTGCTACTGGGCCAGTGGAAGATCATTGCTCTAGATCTTGAATTGAGTCACCGAGCGCTGCGCGAGGCGGGGTTGTGAGGATTAGCGGTCGGATGCTCAGTGTGGTTTTAGTAAATGTATTTATCTGCCTTGAAAGTTTGAGCCGTCCCAACTTTTAACCGCCAGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCGTAAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTAAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //