Array 1 75002-77736 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNTW010000003.1 Lactobacillus delbrueckii subsp. lactis strain DSM 20076 DSM20076-i1-1_scf3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 75002 33 100.0 38 ................................. AATCGGCCTGCAGGAGGGCGTTTTGGCCAGTTGACCCG 75073 33 100.0 33 ................................. AATCCGTCGCGCTTGATTACTAAGTCAACCGCT 75139 33 100.0 34 ................................. TGGCTACCACCGGCCTTAGGAAAGGCGAAGCACT 75206 33 100.0 35 ................................. CGGACTTGGCCCTTAATTAACTCCTCTGCGCTACC 75274 33 100.0 34 ................................. ATCGGGTCATTTGCACCGTAAAAGTAAAAAGCTG 75341 33 100.0 33 ................................. TTAACCTCATCGACAAACTGGTCGTGCGTCCGG 75407 33 100.0 33 ................................. ACGGTCAAGGTCTACGGCCCTGAAGCGAGGGTT 75473 33 100.0 33 ................................. TGTAGAAAGCAAAAAGTGGATACTTTAAGCCAG 75539 33 100.0 36 ................................. AGAATTAGAGCCAAAGTTGGTCTGCATCTCTGCCCC 75608 33 100.0 35 ................................. TTTAAAGACATGGTCACCCAGGCAACTGAATCCTT 75676 33 100.0 33 ................................. ACAGTGTCCTCCGGATCACCCCCACAGAAGTGA 75742 33 100.0 34 ................................. TGAGCTCTAACCCCGTTTCCAGCTCTACGTAGAG 75809 33 100.0 34 ................................. CCAGCAGACCAAGGAAATCTTTAACTCAGTTGGC 75876 33 100.0 38 ................................. ATTTACCGCCCAAACAGCCAACTTGCCAATTACATCAA 75947 33 100.0 38 ................................. AATCACCCCTTAATGAAGTAGACACCGGACTTGTCAGC 76018 33 100.0 35 ................................. ACTGTCACACCGATCGACTGGGGTTACTGGGGTGA 76086 33 100.0 35 ................................. TTCCAGGCCCCGTAAGCAAGCCTTAGTTCGGGCTT 76154 33 100.0 35 ................................. CATAACCGTGTTTCCACTGCTTAGACTCTCGCCTA 76222 33 100.0 35 ................................. ATGTCAGTGATGTATTTAGCATGATTGACCGTTAC 76290 33 100.0 35 ................................. AAACTTTACTCCAGGATTATGACCTGGAATGCGAC 76358 33 100.0 38 ................................. ACATGAAACAAATATGTCTGGTCAAAAAGCAGAACCAG 76429 33 100.0 33 ................................. TGGCATGTCCATTGGGGTTGGAACCAAGGAGAA 76495 33 100.0 33 ................................. TCTACCTGGGTGATGTAGGAAGATCTGGTTTGA 76561 33 100.0 35 ................................. AACATCAAAAACGGCAGAAATGTAAAAGTTCCGGT 76629 33 100.0 34 ................................. TCTTGCTCGGTGCGGCTGTCCTGGTCGTAGCTGT 76696 33 100.0 37 ................................. CAAACGTAAGCAGCATTGTCTGAAAAGTAGAGGTCGC 76766 33 100.0 34 ................................. GGCTACGGCGACACGGAAGACGCGTCACAGCCTG 76833 33 100.0 33 ................................. TGTGGATCCTTAGCGCCATCTACCTGAATAGCG 76899 33 100.0 33 ................................. TTTACCACCGTCACGCTTTTCTTGACCTTTTTG 76965 33 100.0 36 ................................. AACTACTACTACCAGCACCCAAACAAAAGACTTTTT 77034 33 100.0 36 ................................. AACTACTACTACCAGCACCCAAACAAAAGACTTTTT 77103 33 100.0 33 ................................. CATGCCGCGAGCTCAGCCTTTGAGGACTCACGT 77169 33 100.0 33 ................................. TGCTGCTCCAGGCTGAGACGCGTCTTCCGTGTC 77235 33 97.0 33 ....................T............ AGTTAAACAAACAGCCGACAGCCTCAACGCCTA 77301 33 100.0 38 ................................. GTTCTCCGTAGCCTGGCAAGGTGCCCAAGAATCTGTCC 77372 33 100.0 33 ................................. GTCTTTCTTTGTTGGGACGTGCAATTTGGTGAT 77438 33 100.0 34 ................................. ACTGCCGACCGCTGCCACGTAAACTGCGTCTTGA 77505 33 93.9 33 ..............................G.G GCTGAAGGGAAAGTAGCAGCAGAAAGAAGAAGC 77571 33 93.9 33 ..............................G.G GCTGAAGGGAAAGTAGCAGCAGAAAGAAGAAGC 77637 33 100.0 34 ................................. ATTTGCTGGTACAAAAGTAACAGAGTTACAACAA 77704 33 84.8 0 ..........A...AA....T......C..... | ========== ====== ====== ====== ================================= ====================================== ================== 41 33 99.3 35 GTCGCATCCCGCATGGGATGCGTGGATTGAAAT # Left flank : CGGATACCCTCCGTTTTTATGGAAGTAAGTGATTGTAGATGATGATGGTAATTGTCAGTTATGACGTGAATACTGAAACTGCTTCGGGAAAGAAGAGACTAAGAAATGTTTCCAAAATATGTAACGACTATGGCCAAAGAGTTCAAAATTCAGTATTTGAGTGTCTTGTAGATTCTACAAAGCTTGAGGAAATGAAGGAACGCTTACTAAAGGTATATGATGAAGAGTGCGACAGCTTGTACTTCTTCAATGTAGGCAAAAAATATGAGAACAAAGTTCAGTCTTATGGGTGTAAACAAGTATTAGACTTGGGAAAGCCAGTTGTCTTCTAATTATCTAGACAGTACGAGTGTGAAGCTAACAGAATTAGGCAGAGGATTCGCACTGTTTTTGACTATTTTTTTGTAGTCTTGAATATAAAATTGCAGTTTTTTAATGCTTTTTATATTTTGTATGCCCAATATTTAGCTGTGAAAATGCTTTTTTAACTAAATGTTGCG # Right flank : TATCGCTTAGATATGTGGATGCTTGATGGTCAAATTCCACTAAAAGCACTCCCTCGCGGGGTGCTTTTTAATATTTTGCTAAATCAAACGCTTCACCAAGCAAGCAGGAAAAGATTATAGTAAAATATACTGGTTATAAAAAAGCTGAGTCAAGCTCAGCATCCCCAAAACAAAACTTAGTTGAGGAGAATAAACATATGCAAGATATTTATATTGTTGCGGCCAAGCGAACTCCATTTGGCCGTTACCACAAGCAATTGGCTGACTTTTCCGCCATCGACCTGGGCCAAATCGCCCTGCACGGCGCATTAAAAGAAGCCGGCCTTGACGCCGAAGCCCTGGATGCCCTCTTCATGGGCAATGTCCTGTCTGCCGGCTTAGGCCAAAACATGGCCCGGCAAGTTGCCCTAAATGCCGGGATGCGGCAGGACTCAGTCGCCGTGTCCATCAACGAAGTCTGCGGTTCCAGCCTCAAGGCTGCCCGCCTGGCTGAAGCTCAA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCGCATGGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCATCCCGCATGGGATGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.40,-9.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //