Array 1 226881-228247 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMTY01000005.1 Streptomyces toxytricini strain JCM 4421 sequence05, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 226881 29 100.0 32 ............................. GTCGCGATGATCCTGGGCCGCTACCTCGGGCG 226942 29 100.0 33 ............................. CCGCTGCCTTTGGGCCTCCGACAGGCCGGCCAT 227004 29 100.0 32 ............................. AGAGGAGGCCGCACCCTTGAAGGGTGCGGCCT 227065 29 100.0 32 ............................. AGCCCCGTCGTGGCGCAGTACAGCGCGCTGCA 227126 29 100.0 32 ............................. TTTTCGACCCGGTCACCAACGCCCGCGCCGCC 227187 29 100.0 32 ............................. GGCGGCGCGACGGGGAGGTGCTGCACCCACGC 227248 29 100.0 32 ............................. CTACGCCCGAGCCCGCGGCAACCACCGCAGCG 227309 29 100.0 32 ............................. ACGATCTGTACGTCGCCACCCTTGGCACGGAT 227370 29 100.0 32 ............................. GGGCCGACGGTCGTGGTCTGGACGCTGAAGGT 227431 29 100.0 32 ............................. GCGGCCAACACGACCGGTGTGGAGGTCGTGGC 227492 29 100.0 32 ............................. GTGACGGTTCACTTAACCTCGTAGGCGGGGCC 227553 29 100.0 32 ............................. GGGCTGCTGCCGCCCGAGGCCACGCAGGGGCA 227614 29 100.0 32 ............................. GGGCCCTTTCTTCCGGGGCGTGGCCCAGGGTG 227675 29 93.1 32 ..............G.......C...... CGCCGCCGCGCCGCCCGTAAGGAGATCGCCAA 227736 29 100.0 32 ............................. GAGACGGTGCGACGGCGATTCGGCAGGCTCAT 227797 29 100.0 32 ............................. CACGCCAAGGACCACCACGGCTACCTGCCGCT 227858 29 100.0 30 ............................. GCGGCCGCTGCGAACAGCCGCGACCCTGCG 227917 29 93.1 32 ...............C........C.... CAGCGCCGCGCGATCCCCCGCGCCGGCACCCG 227978 29 96.6 32 ............T................ CTGCCCATCCTGCACCGCCGAGACCCCTATGC 228039 29 100.0 32 ............................. TCGTCCCGGCCGTACCTCACGACCTCGACGTC 228100 27 86.2 32 A....--.......T.............. CGGGCCGGATGGCTGCCGCTGTGCACCCCCAT 228159 29 86.2 32 ...A....T.TG................. GACGAGGAGTGGGCCCGCACCCTCGGCGTCGA 228220 28 79.3 0 ...........G..G.....CGC.-.... | ========== ====== ====== ====== ============================= ================================= ================== 23 29 97.2 32 CTGCTCCCCGCACACGCGGGGATGACCCC # Left flank : CCGAACTCGCCCGCATGTCGGGGGAGCGGCAGACCGCGGAGCTGCTGCGGCTGTGGACGCTGAAGGAGGCCTATACCAAGGCCCTCGGGCAGGGCCTCCAGCTCGGCTTCACCGAGTTCGGCTTCGGCCTGCGCAGCGGCGGCCTGATCGCCCCGGACGGCACGCCGGCGGGCGGCGGGGAATGGGCGTTCGCGACCCACCCGGTCCTGGCCGACCGCTACCTGCTGAGCACGGCATGCCACGACACGGGCCTGGACCCGGCCCGCGACACGGCGGTGCACACGATGCTGGACCCGGCGTTCATGGCGGCGGTGGAGGACGCCCTGACGACGGGGTGACGGTCGCCCCTGCCGTTTGCCGGCCACCGCGGCGCACGCGCGCCGACCCTGCTGTTCCTCGCAAACGAAAAACCTGATTTGAGTCGTAAACACGAAATGCCGGATACTGCGAAAGTACTCGGAACCGCGTCCCTTGTCGCATAACATCGCAGCTCACGTAGT # Right flank : CTGGAAGCCTGGCCAGAGGTCGTCTCCGCCTGCAAGCGGGGGATCGGGCTTCGTTCGGCGCCTCGGCGTCACGCCCGGTGGCGGAAGTCGGCCGCGTGTTCCTCGGCCCACTGGGTGAAGGTGCGGGCCGGGTGGTGCGTCACCTGCTCGACCGTGTTGACCACCGTCGTGGAGTCCTCGGTCGGCTTCGCGTACCAGCCCACCACGTACTCCGCGTCCGCCCGCGATACGCCCGTCGCCATCAGGCGCTCGATCGCCTGTTCGTGTGTGATGCGGACCAGGTTGATGTCGCGCCCAATCGACCGCGACAGGATCGTGATCCGCTCGCTTGGGGTGAGCGCCTCGGGGCCCGTCAGGTTGTAGGCCTTGCCCGTGTGGCCGTCCTCCAGCAGGGCGGTGGCCGCCACCGCCGCGATGTCGGCTTCGTGCACCAGGGCGCTCGGGAAATCGTACGGCTCGCGCACCACGCCCTCCTGCCGCACCGAGTCCGCCCACGTCAG # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACACGCGGGGATGACCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACACGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 238859-240648 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMTY01000005.1 Streptomyces toxytricini strain JCM 4421 sequence05, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 238859 29 100.0 33 ............................. GGCGGCCTGCGCGGCCGCGGACCGGGCGCGGCC 238921 29 100.0 32 ............................. ACCCTCCCCAGGAACCCCTTAGGAGGCCTCAC 238982 29 100.0 32 ............................. GAGACGCTTCGCCGCGTTTTCCGGGAGGCAAT 239043 29 100.0 32 ............................. AATTTCCATTGAATCCCCATGTCGACTGTGAC 239104 29 100.0 32 ............................. CGCATGTGAGCAGGTCAAGGTCACACCTTCGG 239165 29 100.0 32 ............................. GGGGGCGCGGCCGCGGTCGGGCACTCGTTGCT 239226 29 100.0 32 ............................. CCGGCCGCCGACATCGAGCTCGAGGCACCGCC 239287 29 100.0 33 ............................. CGATGTTGCCCGCGTTCCCCGCAGAGATGCCGG 239349 29 100.0 32 ............................. CCCATGCTCGCGATGAAGTCCTCCGCGATCCG 239410 29 100.0 32 ............................. CAGCGGCCCGGTCCACCGACCCCGCCGCCGCC 239471 29 100.0 32 ............................. TTGCCGCCGAACATGGTGACGCCGGCCGCGGC 239532 29 100.0 32 ............................. CCGCCATGCCGTGCACCCCCGAAGCCGTCACT 239593 29 100.0 32 ............................. AGGCTGAAGGCCGGGTTCACGCCCTGCACGTA 239654 29 100.0 32 ............................. CCGCCTGCGGTTCCTCCTCGGCCGCGAGAGGG 239715 29 100.0 32 ............................. CCGGCCTCGTCGGCATCCCGACCAGCGGCCCT 239776 29 100.0 32 ............................. CCGAGACCTGGTCGGCACAAAGGGAATCGTCG 239837 29 100.0 32 ............................. CGGAGCCGCATCAAGGAGATTGCGGGGATCAG 239898 29 100.0 32 ............................. GTCTCCGGCGTCGAGACGGACACAAGCGGGTG 239959 29 100.0 32 ............................. GGAGCAAGGGACTGCGGGTCCTGCGTGTCCCG 240020 29 96.6 32 ........................A.... ACCACCACCAGCCCGTCACCGGCTGCCCCTGG 240081 29 96.6 32 ........................C.... GGTACGCAAGGCCGGCGAAATGCTTTCGTGGG 240142 29 93.1 32 ......T.................A.... GCCAGTTCCCGGGTTCCGGGAAGTGGTCTGAC 240203 29 96.6 32 ........................A.... TCGGAGGCTTGGCGCAGGCACCAGATCAGCCG 240264 29 96.6 32 ........................A.... GCCCACAGCCGGTCCAGCCAATCGGCCGCCGC 240325 29 96.6 32 ........................A.... CGCGTTCTCGGCCTCGGTCTGCGCCCCCGCAG 240386 29 93.1 33 .............A..........A.... GCGCCCCACACCACCGGTGTGGAGGTCGTGGCG 240448 28 82.8 32 A.......A...T....-......A.... GGCGACGGCCCCTCGTCGCTCGTGCACCCGGC 240508 29 93.1 31 A.......................C.... CGGAGTCCGGAGTGGTCGTCTGCGCGGTGGA A [240518] 240569 29 89.7 22 ......................C.A...A AGCCCACCGACGCGGAGTTCGG Deletion [240620] 240620 29 86.2 0 ............T.T.........A.G.. | ========== ====== ====== ====== ============================= ================================= ================== 30 29 97.4 32 CTGCTCCCCGCACGCGCGGGGATGTCCCC # Left flank : AGGTCATGCTCCAGTCCGACCGCGACCTCATGGTCGCCTCCGGCCGGAACCACGCCGACGAGGTGACCTGGTGACGGTGATCGTGCTGACACAATGCCCGGTCGGCCTCCGCGGCTTCTTGACGCGGTGGCTGTTGGAGATCTCCCCTGGCGTCTTCATCGGAGGGCCGTCCGCCCGGATCCGGGCGGCGCTGTGGGCGGAGGTGAAGCAGTACGCGGGCATCGGCCGGGCCCTGCTCGCCTACAACACGGACAACGAGCAGGGGTTCGCCTTCGAGACGCACGACCACAAGTGGCACCCGGTTGATGTGGAGGGAGTGACCCTGATCCACCGCCCGAAGGACCGCACCACACGGCAGCCCCAGCCGCAGCCAGGCTGGAGCAAGGCCTCGAAGCGCCGCCGCTTCGGTGGTCGGTAGGTCCGGCATGTCGGGTATGCCGAAACCTCTGCAAGTAAGCGAAAGGACCCCAGACCCTCCGAAAACCCGCAGCTCACGTAGC # Right flank : CGCCCCTGTGGTGGGCGCCATGCCGTTTTGGAGCGGTGGCTCGTAGCCGGGATATGCGGCCGCGACCTCAGCGTGGCCGAGGCTTCCTAGTTATCGTCGGTCTCAGCGTCGCTATGCGGTGCGGGCGAAGCGGGTGAGGGTGGTGCCGCTGGGGAAGGCGGTGCGTTCGGTGACGGTGAAGGCCGTGGGGTCGAAGGTGCCGTCGAAGGCCGGGATGCCGGCGCCGGCGACCACCGGGTAGCTCTTGACCACCAGTTCGTCGATTTCCGGCAGGAGGGTGCCTGCCAGTTTGCCGCCGCCGCAGAGCCAGATGTCCAGGCCGTTGCCGGCTTCCTTCTTGAGGTCGCGGACGAGGGGGAGGGGGTCTCCCGGGACGACCGTGACCGCCGGGTCCGGGTTCGGGGTGAGGGTGGTCGAGATGACGTACTGGCGCAGGTGTGCGTACGGGCTGGTGATGCCCGCGTCGTAGGCCGGGCGGTAGGTGCCGAGGCCCATGAGGA # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACGCGCGGGGATGTCCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CCGTTCCCCGCACGCGCGGGGATGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //