Array 1 25651-26543 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJVB010000024.1 Anoxybacillus flavithermus strain WS5446 24_38907_206.327, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 25651 36 100.0 30 .................................... GTATCCGTCGTATTCTTCAACGGAACGAAA 25717 36 100.0 30 .................................... AGTATTATTTTATCATGAAGCATTGACAGA 25783 36 100.0 30 .................................... AGAAATTTCTTTAGCTTGGTTGGACTTGGA 25849 36 100.0 30 .................................... TCTTTAACTGGCTTTCTCCCTTTTTCTTCA 25915 36 100.0 30 .................................... AGCCGAACATGCAGCAAGCTGGATTTTTCA 25981 36 100.0 30 .................................... TAGTTGCACCAGCATTAGCTGTTTTCTTCA 26047 36 100.0 30 .................................... AAAACTCCAATAACACAACCGAAATACACG 26113 36 100.0 29 .................................... TTAAGAATCTTGTAGCATACACGGATCGC 26178 36 100.0 30 .................................... AACGTATAAATGAATTTATTAAGACATTAG 26244 36 100.0 30 .................................... GCTTGAGAATAATTTAAAAGATAAAACTGG 26310 36 100.0 30 .................................... AATTTATACAGTTCTTCAATCGCTTTATCG 26376 36 100.0 30 .................................... CATATTATTATCACCTCGAACATTTTTTGT 26442 36 100.0 30 .................................... AACTTGATCCGCATAGAGCGCATGAAGCAA 26508 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 14 36 100.0 30 GTCATAGTTCCCCTGAGGTTATTGCTGTGGTATGAT # Left flank : TCTTACGTTTGGGACGATTGATGAAGCGATTCAAATGATCAACGATTACGAAAAGCCGCTTGCGCTTTATTTGTTTTCAGAAGATCGCGATGTGCAACAACAAGTATTACAACAAGTTCGTTTCGGCGGTGGTTGTATAAACGATACGGTTGTACACGTTGCCAATCCTCATTTGCCCTTCGGTGGTGTTGGACAAAGCGGCATCGGTACATACCATGGAAAAGCAAGCTTTGATGCATTTACTCATTACAAAAGCGTGCTCAAACAGACGACGAAATTTGATATCCCGTTGCGTTACCCAAACTTTCCACATGCGCTCAAATGGGTGCGGAAGTTATTGAGATGAAAAAAGGCTGATCCAAAGTACGGATTTGTATTATCCCCTACAGGTAGCCAACAAAAAAGTGGACATTTGTTATGGTGTTCTTAAGAGTCTACCTGGAAGGGGTTTTTATGACCAAATGTAAATTATCAATTTATCCTTGAATAAGACACCTAAG # Right flank : TACGTGCATCAAAAAGCCTGTAATATGAACGATTACAGGCTTTTTGATCGTTTTAAAAAAAACGTGAGAAGGGGAGAAGAGTTATCCTTCATCCGTTTTTTTAAAAAAGTGACAGTTGCGTTGTTGTAATTGTTTTTTCCTTGGTAGTAGGTTCTCCTAAGAGAAATTGCATTTTTGCATATTGTTTTTCCGTTACGATCATCGCCCGCACTGATCCTTTCGGTGGCAAGTTTCTTTTCAGCCTATTAAGATGTTTATCAGCAGATTCATGCCCATTGCAAATCCGACTATATACGGAAAACTGTAACATATCATATCCTTCGTTCAATAAAAATGTACGAAATTGTCTGTAGTGCCGTTTCTCCCGATTAGTGACGACAGGTAAGTCAAAAAACACAAGTAATCTCATAAACTTACTCATAGGTGTGTATTTGAATAGGAAGAAGTTCCGGCAATTTTAAAAACGAAGGTTTTTCGTTTCGACTAGCTGTTACGAAGCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATAGTTCCCCTGAGGTTATTGCTGTGGTATGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 97534-95004 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJVB010000002.1 Anoxybacillus flavithermus strain WS5446 2_109755_148.084, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================ ================== 97533 30 100.0 37 .............................. TGGGGTTTTGGGGCCCCATGCGCGCGGCGTGGAGCGA 97466 30 100.0 37 .............................. GATTCAGACACTTTACTGCTTTCGGCAGGTATCGCGA 97399 30 100.0 38 .............................. GCTGATTTGATCGAAAGTATGAAGGCGATCTATGAAGG 97331 30 100.0 38 .............................. CCAACATCCGCAAACCCATCCGAAATATTACTAGAAAC 97263 30 100.0 37 .............................. ACATCCTTTTAAACAATCTTATTTTCCCATCAGTACA 97196 30 100.0 37 .............................. TGTACGCGACTTTCTACTAACGGAGATCATGACGGGT 97129 30 100.0 40 .............................. AACAAGCTATACGGCATTTATACGCTGAAACGATCGGCAA 97059 30 100.0 36 .............................. ATGCAATAGATGACGTTGATAACGTTGGCGCGTATG 96993 30 100.0 37 .............................. GTAAGACGTTGAACGATTGGCTGGACAAGCGGTCGAA 96926 30 100.0 37 .............................. TCATATGGTCACGTTCAACATGCCGTATGTTCCGCAT 96859 30 100.0 38 .............................. TTTATTAGGTGGTGATTTTTTTGAAACGCTTTTTACTC 96791 30 100.0 39 .............................. AAAAAAGGAAAATATGTCATTGCAAATTTTCCGATTAGA 96722 30 100.0 36 .............................. AAGGCTATAAAATGAGCGGCAATGTAGGTGGTGAAC 96656 30 100.0 35 .............................. ATTAATGAGCCGTGCCCTGCTGTAAGATCGGCTAT 96591 30 100.0 38 .............................. TGACAGCATCCGAAGCAATTTTCACATCTTTCACATCA 96523 30 100.0 36 .............................. CCACAATACATCGTTAGACCGTACTCGCTGAACGGA 96457 30 100.0 38 .............................. ATCGAAAACCGTCTTTACCTCTTTAATTTCTTCTTTTA 96389 30 100.0 39 .............................. TTATGTTGTTGTACATCTTTTTGACAAGTCTGGCTTTTT 96320 30 100.0 37 .............................. GTATGATCGCGAATGGTCGTCCAGTCGGTGAACTTGC 96253 30 100.0 38 .............................. TTATGCAAAAAATGGGCGTCCATTCAATGAATACGGTC 96185 30 100.0 36 .............................. AGCAGGTTATCGACTATGTCATTCGCAAAATCCCAG 96119 30 100.0 39 .............................. CCATTTGTAAGACCACTGTTATATAGTGGGGGTAGTGGA 96050 30 100.0 39 .............................. TGTCTGGTATGGTTCGTATAAATACGCGGATCAGTAAGA 95981 30 100.0 35 .............................. CATCCCGCTTGCTGTTATTGTTTTTTTGATTTTCC 95916 30 100.0 38 .............................. TCGGGATATAGGTGATGGCGTGAGTGACTATAAATATG 95848 30 100.0 37 .............................. TCAGCACGAATCACCAGATGCGGACAAGGTTGTTCAA 95781 30 100.0 39 .............................. ACGTTGTCACCAAGAGTTTCGATTTCAGTTCGGTAGAAA 95712 30 100.0 35 .............................. ATCGAAATCCTCTATAATCCCTTCATCCGCACAAA 95647 30 100.0 44 .............................. GCTTTAATTTCTGTTCCTGTGTACTCTTTGATTATCTCATAAAG 95573 30 100.0 38 .............................. TTAAGCCAGTGGAGGAGATCATAAAAAAAGAGGACTTG 95505 30 100.0 38 .............................. CTCCGATAACAACTGTTCTCATATCGCCATCTCCTTTT 95437 30 100.0 37 .............................. TACTTTCCTTACAAGTAAATTATAAACCTGCTAATTA 95370 30 100.0 35 .............................. CAGTAGAAAAATTACTAGCAACTTTTGAAAAACCG 95305 30 100.0 37 .............................. GCAAAAGAACGGTTTCATATGAAGGTTGAGCTTAAAT 95238 30 100.0 39 .............................. ATTCTGTTGGTCGTGCTGGGAAAAATGCGAGTGACGAAG 95169 30 100.0 38 .............................. TCGGACATCATGACGGACATGGAGCGTGAGTTTCGTAT 95101 30 100.0 38 .............................. TGCGCCAGGGCGGACATTATGGCCGGATTACATCGAAA 95033 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ============================================ ================== 38 30 100.0 38 ATTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : TATTGTTTGGCTTTTTTGAAACATATGTGAAATTATCAGACGAAGAAGAACGAAGACTGCGAAGCGAGGTGAATGAAATGGAGACGAAAGAAAAAGAACAAGTGATGGAGTTGATTATTTCGTATGAACAAAAGGCGTTGGAAAAGGGAAGAGAAGAAGGGATAGAACAAGGAATCAAACAAGGAATCAAACAAGGGATGAAGCACCTTGTACAAACGATGGCCAAAAAAGGGATGAGTGTAGAAGATATCGCAAACATCACAGACCTTGCGGAAGATGAAGTGCGTGAATTGTTAGAAAAGGAATAAGTAATTTGCGCATAATTTCACAACCGTCGTCGACCTCCAATCTTGCAAAAACCCCAGGGGATCGACGACAATTTGTTTTTTGCAACTTTTTTAGACGTATCAACGCATCAAGACGATTGACAGAATTTTCGAATGTATGTATAATGACATTGTATAGCTTTTCCAAGTATTGATTTATCAGCACTTTTTGGG # Right flank : ACCTTTGTAAAAATTCTTCAATTACTTGAGCTTTTTCGTTTGGTTTGTATCGTACCTACAAGAACCAGTATGTTAGGGTCTGGATTTTTTTGTATATACCATTTTACTTTTTCTTTAACATTTGTTATAATATAAGGTAGAGAACATCTTTCTTTCCGATTATGGTAAAGTGAGATGTTTTTTTCGTGGAAATATTGATTTCACAAAGAAATGGAGGGATTTCTGATGAAGAAATACGCCATTGTGTATTGTGAACATCAATTTGGTTCCATGGATGGAAAAACAGCGAATGGGCTTGTGCGCGATTCAGGGCTGTATGAGATCGTTGCAGTCATTGATTCGACAAAAGCTGGTCAAGATGCCGGAGAGGTGCTTGATCAAAAGAAAAATGGCATTCCGATTTGTAAAAACCTTCAAGATGCAATAGCCTCCGCAAAAGAAAAACCGAACTACTTCATCTTAGGAATTGCTCCAGCGAACGCTTTTCTCAAAAAAGAAGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 12560-14349 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJVB010000030.1 Anoxybacillus flavithermus strain WS5446 30_30776_152.725, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 12560 30 100.0 36 .............................. CAATCTACTAAAAGCTAAAACTTTGCGTATAAAACA 12626 30 100.0 39 .............................. GAATTGAACACGATTGGCTTTTGCTTTCTGTATCTCTCG 12695 30 100.0 38 .............................. TCCGATGACATAAACTTCATCTACAATCGGAAAATCAG 12763 30 100.0 38 .............................. TTCCCATGTGAAGCCGAGCATTTCGCCAAGTCCGATGA 12831 30 100.0 36 .............................. ACAGTTGATCAAAAATGATGTGGAGGGAGATGAGGT 12897 30 100.0 39 .............................. ACGGTTTGTCGGATGTTGTCGAAGCTATCAAAGGGTTGG 12966 30 100.0 37 .............................. AAACAGGCGATTGACTATGTCATTCGCAAAATCCCAG 13033 30 100.0 39 .............................. TCGAACCATAAATCATCAATGTTGAATTTATCACCAATA 13102 30 100.0 39 .............................. ACGAATGATCTTCGCGTCTGCTTCAAGGTTGCGAATGAA 13171 30 100.0 39 .............................. CATCTTCATAAGCCCATTTCCCGTCCTTCTTTTTATCCA 13240 30 100.0 35 .............................. GTAAATACGATCATTTTTGTTTTGGGATTTGTTCC 13305 30 100.0 38 .............................. TAGACAGCTACAAAGGTAAATTTATCACTGTATTTATG 13373 30 100.0 39 .............................. TGCGCTCCGCAAGCTCCACAAGAACATAGTCAACGACAT 13442 30 100.0 40 .............................. TCGTGAACACCTGCGGAAAAGGTTTATAAGATAATGGACA 13512 30 100.0 36 .............................. ATCTCTCATCATCGTTATCTTTTGTCATGTATTTGG 13578 30 100.0 39 .............................. AAACAAGCTATTGATTATGTCGTTCGCAAAATTCCAGGA 13647 30 100.0 39 .............................. GTCAATAAACAGTGATGCTTCCTCGTAACTCATTTGTGC 13716 30 100.0 35 .............................. CAATGATGGCATCATATGCGCTGCCACCTGCAATA 13781 30 100.0 38 .............................. AAGAAAACGCCACCCCGATCGGAGTGACGCCCTGCTTC 13849 30 100.0 37 .............................. ACGTTGTAGTATTCATCGACTAGCCGCTCGTATGCTT 13916 30 100.0 37 .............................. CGCTAGATGATTTTTCGGGATTTTTCACGCTGCAAAA 13983 30 100.0 38 .............................. CGCTGCAAAAAGTTGTTTCAAAACTCAAAAGGGGGCAT 14051 30 100.0 38 .............................. TGGATTTCAAGTTTATTGATCATTATGATTTTTTTCTC 14119 30 100.0 39 .............................. TCTAAATATTCGCCCGTCGATGTTTCTCCGAACGCAAGG 14188 30 100.0 38 .............................. ATGCTTTCGGATGCTATCCATTATCTGGCCACTAAAAC 14256 30 96.7 34 .............................T AATGGAATCACAATGTTGCCTCCTGCTAGATAAA 14320 30 80.0 0 A.......................A.CGTT | ========== ====== ====== ====== ============================== ======================================== ================== 27 30 99.1 38 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : GAAGCGATCGATGCAACAAAGCGCCCGCTCGTAATCGGAGGTGTATTCGTACTTATGCTTGCATCGATCATTTTCTCTCACCGCGCCAACACATATTTGCGCAAATTAGACAATGAACAGTAAATTCCCCTGTTTTCGTACAAAGAAAAAACATGTAAAATAAAAGAAAATGGGTAAAGGGGGAATAAACGATGATGTGGATGATTACAGGTCTAGTCATTACAGCTGTCATCGGTTTTGTTATTATCGCGGAAGTGAACGCCGAAGCATAAAACAGTCTCTAAACAGGAGACTGTTTTTAATAAAATTTATTTGTGATAAACTTCACAACTGTCGTCGACCTCCAATCGTGCAAAAACTTCGGGGGATCGACGACAGTTTATTTTATGCGAATTTTTTAGCTGTATCAACGGACATAGACTATTGACTGAATTTTCAAATGTATGTATAATGATGTTGTATAGCTTTTCCATGTGTTGATATATCAACGCTTTTTTGGG # Right flank : TTTTTGTATTGAAAAGCAGGGATGTTTATGCCCTGCTTTTATTTTTTTGTTACAACTTTGTTACAACTTTCAGAAAAGTATTGCGCAAAAACTAGTTCGTTTGTATCATCAGTAATATGAGGATATTTTTTGAAAAGGTGGATAAGGGATGAAACTACTAACATTTCTCGGCGCGAATGACTATCGTGAAACAACGTATCGTTTTCGGGAGCGTGTGCATACGGCAAAGTTTTTTCTATCTGTCCTTATTCAAGAACTGCAACCAGGTGAAATATACGTATTTATGACAGATGGGGCACGAGAGAAAAACGAAGCACCGTTGCTTGACGAATTAAACCGATACGGCGTAGATGAAAAGAAAGTGCATGCTGTATGCATTCCCGATGGGCAAACAGAAGAAGATTTATGGAATATTTTTTCTGTTATTGCTGATCATGTGTATGAACATGATGAAATCGTCCTTGATATTACGCACGGATTTCGGACGTTGCCGCTCGTTG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 14847-13101 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJVB010000032.1 Anoxybacillus flavithermus strain WS5446 32_27177_93.9913, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================================================== ================== 14846 30 100.0 36 .............................. CCTTCGTTGCCATGAAAATGCTTCATCGCGACATGA 14780 30 100.0 37 .............................. ATCGCTTGTGTGGATTGGCTTCAGGTCACTTTCAAAA 14713 30 100.0 37 .............................. AGCCATTCACCGCGCCAATGGCGATATTCGCTCCTCT 14646 30 100.0 36 .............................. TAGTTTACCTGCCGCCATCGCTTGCGTGAGCTGATA 14580 30 100.0 39 .............................. ATGCAATAGATGACGTTGATAATGTCGGTGCATACGTCA 14511 30 100.0 35 .............................. GCGGAGTACAAGAAGCGATATGATGAGGCTATGAA 14446 30 100.0 36 .............................. TCATACAGAACCGATTATCGCCGACAGCGCCGAACC 14380 30 100.0 36 .............................. TTTAAAATAATTATTAATTATCATTGATTTCTTTAA 14314 30 100.0 38 .............................. CCTTCTGAAATGATGGACACTACGCGTGCGTTCGTGAG 14246 30 100.0 39 .............................. TCCATAACGCGAATGGTCGCATCCATCGCACGAATCATT 14177 30 100.0 38 .............................. ACGAGCATCGCATCGAAAATCGGTGCTTTCCCTGTTCG 14109 30 100.0 36 .............................. TTGTACTCGCGAATGATGTCGCATGCTTTCGGAGTT 14043 30 100.0 36 .............................. CTGATTCCGTTCAATTTCTGTAGCTCATCTACTGTT 13977 30 100.0 36 .............................. TTAAACAGAGAAAAGGAAAATATCCAAATGAGTTAA 13911 30 100.0 37 .............................. AATTAATTAAAGGTAAAGAATTAGAGCATTTAACATT 13844 30 100.0 44 .............................. CCTTTCTGATGCGACTGTTCAACTCGCATTTCCGCAACGGCTCA 13770 30 100.0 39 .............................. TCGCCACAGTCATGACATAGCAAACGATCCGCGTCATGC 13701 30 100.0 39 .............................. CACTAAACAGCGCAAAGATAAGACTAATGAAACCTCCGA 13632 30 100.0 36 .............................. TCATCATCAACCGATTGAGCCATCTGTCTTTCTCTT 13566 30 100.0 38 .............................. TACCTATACTCTCCGGGATCGCCGCCGGGTTTGCGGTA 13498 30 100.0 36 .............................. AGATCATATCCCGCTTAGCTATTACTTTTCTCCGCA 13432 30 100.0 39 .............................. AGCGTAATGTTTAACGCTTTTTCCTTCTCGAGTGGGAGA 13363 30 100.0 38 .............................. ACAATATCAAGCACCGTCATTGTCATTCAGCTGCCTTT 13295 30 100.0 38 .............................. TTATAAAACCTGGAAGCGTTTCACGCCGACGATTTGTC 13227 30 96.7 68 .............................T ATCAATAAAAAATACCTATGAGGAATTGAAATATCAATAAAAAAATGTTAGCCAAAAAACATTTTGAT 13129 29 83.3 0 ....T............A....-..A...A | ========== ====== ====== ====== ============================== ==================================================================== ================== 26 30 99.2 39 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : ACGTTGGATGGAAAGAAAAAAACACAGTTTTTTGATCCGGACGACGAAGTGTTTTCACATTTAATAGAACGGAATTTTTATAACAAATATGAAGCATATTACGGTGTTCCACCAAGCGATCGGCTACTCATCGAACCTGTCGATGTTCGAAAATGCGATCGGGTCGTAACGAGCTTTAAAGGCTTTTACATTACAGCGTGGAAAGGGCGGTATAAGCTCATTTCTTCTCCGGAAAATTTAACGTTTTTGTACCGTGTAGGTATCGGTGGACGAAACTCACAAGGATTCGGCATGTTCCGCATCATAAAAGAAAAGTGAAACATTTCACAGCTGTCGTCGACCTCCAATCGTGCAAAAACCCCGGGGGATCGACGACAGTTTATTTTATGCGAATTTTTTAGTGATATCAATAAATACAGAGTATTGACTGAATTTTCGGATGGATATATAATAGAGTTGTATAGCTTTTCCATATGTTGATTTATCAACGCTTTTTTGGG # Right flank : AGCTGTTCCGAAGTGTTGTTCGGAACAGCTTTTTTGTTGTCTATACGTTCCAGAGACCTTTCTTTTGTTGGCGTGCTTTTCGTTCGGCTATACATCAGTGTATGAACATTTGTTATAATGTATTTACACGATTATTTCCTTTATTGACAATGATAGATAGATAATCCTTTTTCACTTTTATTTTTTTAGATATTTAAAAACGTGATAGTGAATTTTGTCGAATTTATTCACACAAACGTTATATAATAGTAGTAAAATAAAGGAAAGATAGAAGCTGCAGGAGGTAACACCATGGATTCTATCCAATTTCAAGATAAAGTGTCGTTTATATGGACAAATGCAGATTTATTGCGCGGAGATTATAAGCAATCGGAATACGGAAAAGTGATTCTACCTTTAACGGTGATTCGGCGCATTGATGCGGTGCTAGAGCCTACGAAGGAAGCGGTTCTTTCCCAATTGGAAGAATTAAAAACGATGGGAATGACGATTGAAGACGG # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:-0.07, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.68 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 25628-23836 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJVB010000032.1 Anoxybacillus flavithermus strain WS5446 32_27177_93.9913, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 25627 30 100.0 37 .............................. ACGATCAAGTCTCAAGGACGATAGCGAGACTGTATTT 25560 30 100.0 37 .............................. ATTTTCATTGCTTCTGGAGTAACATAAGAGAAGGCGA 25493 30 100.0 39 .............................. TTTCGGACAAGGTGACGGCGCGGTTTTTATCGGCTATCG 25424 30 100.0 37 .............................. CTCTGCATTCACACGTTTTTGCTAATTCATAACCTTT 25357 30 100.0 39 .............................. AGTTTATAGATCATTTTGATTTTTTTAATGATCGCTAAA 25288 30 100.0 37 .............................. TACCAATCATGTTTACACTTCTTATATAGTTCCTCTC 25221 30 100.0 36 .............................. TCCATGAAGTAAAAATGATCACCGCCACATAAGTTC 25155 30 100.0 39 .............................. AAATCGGTGATGACGGACAGATGTATATTGATTTTGATG 25086 30 100.0 39 .............................. TTTTTTAACTTGCTAATGCGTTCCTCCATGTTTTCAATA 25017 30 100.0 38 .............................. CAATTCCATTGGCTCACTGATAAGTAATTCTCCATCGT 24949 30 100.0 36 .............................. CACGTGTCGCTAAGCCTCTTCGAGAACAGACTTTCG 24883 30 100.0 36 .............................. TTTTTTCTAATCTCTACCAACCCAACTAAATACATC 24817 30 100.0 38 .............................. GAAAAAAGGGAGTTTATGAACAATTTCGTCGACGGGAT 24749 30 100.0 39 .............................. TAACATAAACGTCAATTTAAACACACGTATATACGAAAA 24680 30 100.0 36 .............................. TTGTTCCAGTATCGACGACAGGAAAGGCGATGAACA 24614 30 100.0 39 .............................. GCGGAGGACAAGAAGGAGCTTTTGCAACAATACGCGGAA 24545 30 100.0 36 .............................. TCTTTTTGGCTATCGAGCAATATATGCAACAACAGA 24479 30 100.0 38 .............................. TAGCGATTAATAAGCACACAAAAGGGTGAGGGTAAATT 24411 30 100.0 38 .............................. TTCCCATGTGAAGCCGAGTCGTTCACCTAATGTAAGGA 24343 30 100.0 39 .............................. CTCAACTCGGTGACACGATTGAAGCTGTTTGGAAAGTCT 24274 30 100.0 39 .............................. GAAACGGTTTTTCAAAAGTAATTCGTAATATTTCGGATG 24205 30 100.0 38 .............................. GCTAATTCTTTACGATCAGTGATGATTTTGTTTTTCAC 24137 30 100.0 36 .............................. TGCTCATATGGTATTGAGTTTAGAGACAGCTACATT 24071 30 100.0 38 .............................. CTATACAAACACGAATCATCGAAAGTCAAGTAAAGGAA 24003 30 100.0 41 .............................. TATCATCGTTTTATCTCGGTGTCAACAATATTTTATTATAT 23932 30 100.0 37 .............................. ACGACATTTGTTCAACTTTTTCATACCATATTTACAA 23865 30 80.0 0 ......................G..TGCCA | ========== ====== ====== ====== ============================== ========================================= ================== 27 30 99.3 38 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : AAGATGATTTAAAGCAATTATCCTTTACTTGTCCGCTTGTTTCCGATGAAAAAAATAAAGGACAATCAAGTCGATGAATTTGCTCGCTATTTAATCATTAACTACCATTTTGGAGTTCATATTATTCATCGTGATTATGTAAGAATATGCTATGAAATTCGCTCTAGAGATCGTCTTGTTTGGGTAAATATAGAAAACAAAAATAAGAATTCATGCACATATGTACAAGGTGATTTGAATTTATTTGACGAAGTGTACCATATTTATATTGAATTTGAACGTATCATAAGTAAAGTACTGTAAAATCTACTTATTGTGAATTTATTCACAACTGTCGTCGACCTCCAATCGTGCAAAAACCCCGGGGGATCGACGACAGTTTATTTTATGCGAATTTTTTAGTGATATCAATAAATACAGAGTATTGACTGAATTTTCGGATGGATATATAATAGAGTTGTATAGCTTTTCCATATGTTGATTTATCAACGCTTTTTTGG # Right flank : TTGTGATCAGTTTTATATTTACTTTGTAATGTTTTGTGTTAGGGGTAGTTTCCTTAATTTCCTACTAATCCTTTTTATTTTTTAGAGCGCTGGTCAGCTATCCTCAACCTCTGTTTTTATGTTACTTATTTCAAAGAGTTATATTAATTTAGAAGGAATATATTCCTTTTATGTCGTATTTTATGGTAGGTTAGTTTATTTAGAAACGAGGTGTGATTTTGCTAGCAGAAGCAGTTGTTCGAGTAGGCGAGTCGCTTGTGAGTAGTGATTTACCTTTAACGGAGCGTATTCGTTTGTTAACGGATGTAGATAATGAAGCTTGCAAGAATTTTTTTGAGCACGTCTGGGTTGTGGAATGCATAGAGGAACAAGTGAACGTTCGTTTGATGAGAATAGGAGAAAAGGTGAAGGAAGGTAAAAAAGAAACGTTTGTTGTTGATAGAGCTAAAAACGTTGCCTTTCCTATCATTTATCCTAATGGTGGGAATCCGCTAAATGCC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //