Array 1 740992-738051 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013860.1 Spiroplasma turonicum strain TAB4c chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 740991 36 100.0 30 .................................... AGAAATTATAGAAAAAAATTACTTAAAGGA 740925 36 100.0 30 .................................... TTGCAGCAGAAAATAGACCTGAACCTATAC 740859 36 100.0 30 .................................... ATATTTTAGCCAAACAATGAACCAAGATAC 740793 36 100.0 30 .................................... AAACTGGTTGCTCATAACCATAACTATATT 740727 36 100.0 30 .................................... TATTTGCATTAAATTTAACAACCTTAAAAC 740661 36 100.0 30 .................................... AACTCAACATTTATTAAAACTCTACAATGA 740595 36 100.0 30 .................................... GTAGACATATTTTCAATAACAGTCGTATTG 740529 36 100.0 30 .................................... CTATTAAAGAATTTAACTCATCCTCTGCGT 740463 36 100.0 30 .................................... AAACACTATCAACATTATTTTTAACATCTG 740397 36 100.0 30 .................................... CTAGCAAAGAAGTAGAATTGCCAAATGTGT 740331 36 97.2 30 ...........T........................ AAAAGTGCTATTTCCAAATGAAACTGAAAA 740265 36 100.0 30 .................................... GTTAAAAACTAAAAAAGTGTCTTATCATTT 740199 36 100.0 31 .................................... AGTTTTTTTATTTTACTATTAATACCAACCT 740132 36 100.0 30 .................................... TTTAGGAGACTATACACAATGACAAAGCAC 740066 36 100.0 30 .................................... TTTTATATAAAGTTGTTAACAATAATAATT 740000 36 100.0 30 .................................... AACGTACTTTTGAAACATTTTATGCAAATA 739934 36 100.0 30 .................................... TTTTAACTTTGAAAATCTTTCTATAAACAA 739868 36 100.0 30 .................................... AATATTAAACTGTGAGTTTCTGCTTTTAAT 739802 36 100.0 30 .................................... ATTAACCAAAATAACCAAAAAAGTTAATTT 739736 36 100.0 30 .................................... CGTACACTGTATTTTTATATAGTTTTCCAC 739670 36 100.0 30 .................................... CAATGAAAACATGTTAAAAATGGTTAGAAA 739604 36 100.0 30 .................................... TAGCAGACAAACTCACAAAACAGTCTAACC 739538 36 100.0 30 .................................... TTTAGAATTAGAATTTGATTTAGAAGTAAA 739472 36 100.0 30 .................................... CACAACCAATTAAAAAGGTTTAAGCACCAC 739406 36 100.0 30 .................................... ATTACAAGCAATAACAACTACAATAGCGTT 739340 36 100.0 30 .................................... TAATTAAATCAAAAGCATCAACAGGATTTG 739274 36 100.0 30 .................................... CACCATTGTTTCTAGCTTCCAACCCATTGT 739208 36 100.0 30 .................................... TGGAGGGCAAAAAAGAAAGATTAATAACTG 739142 36 100.0 30 .................................... TTTACGAAATCACTTTATCACCGGAACAAT 739076 36 100.0 30 .................................... ACAGTGAAGCCAAAAAAATACGTGAAAGTA 739010 36 100.0 30 .................................... GTCCAATGATTAACTAATAAATTCACCAAA 738944 36 100.0 30 .................................... CAAAACCAATGCCTATAATTAAGCAAATGA 738878 36 100.0 30 .................................... TTTTGAAATATTTGTTTTATGTGTTAGACG 738812 36 100.0 30 .................................... TAATATTTCTACTCCAATATTGTTTATCTG 738746 36 100.0 30 .................................... CTATTAAATTATATGATAATTTTGCAGAAC 738680 36 100.0 30 .................................... CTTTTAATGACCTTGCTTTACTTAATACTT 738614 36 100.0 30 .................................... ATTAACCAAAAACAATAAAAAAGTTGGTTT 738548 36 100.0 30 .................................... ATTAAGTCATTTAGACTATTTAAGTTTTTA 738482 36 100.0 30 .................................... CAGAAACTCACAGTTTAATATTGACTTGTA 738416 36 100.0 30 .................................... ATGTTAATCAAATTTTATTAAGATTCTACT 738350 36 100.0 30 .................................... CAGTTAATTCTAATTATGAATTAAGTTTGC 738284 36 100.0 30 .................................... TTTACAAAATGCAAAATGATGGAAGTGATG 738218 36 100.0 30 .................................... ATAATGTTGCTTATAGTAAAGAAGACAAAA 738152 36 100.0 30 .................................... TCTTAACAATTAATAACATACTTAACATTT 738086 36 97.2 0 .......................T............ | ========== ====== ====== ====== ==================================== =============================== ================== 45 36 99.9 30 GTTATGGTACCCTGTAAAATTATGTAGTAGTAGAAC # Left flank : CAGAACAAACAATATTAGAGATTAGCCATAAAAACGATAATGATAACGTTGTTTTATTAAATCAAAAAAAATTAAGAAGTATATATATTGAAATATTAAAATTGCTTTTAGTTATCGAAGATAAAAATTTATTCTTTATTTTTATAAATCCTTTTTTTGGTTTAGACTACAATAGCATGAAAGATTATTTTGATGAAATATTAAACCTAAAAAACTATATAATAATAACAGATAAATTTTTAACTGAAGATTATATTGATTATTGAAATTTAAAATTATATATTAATAATAATTTCATTGATTTCTCAAATATTTATGATGATTTAAAGTTTTATATGAATTTCTCTAATACAGATAATTTAGATAAATTTAAAGCTGAATTACTAGAAAATATATATAAAATTATAATTAATTTTAACAACAAGTTAATAGATTTAAACTATCCCGTTTTCCAATATATTATAAACTTATAAAAATTAACTAAAAAGACTTGATTTGAG # Right flank : CATTAACCAAATTTAAATTTAAAAATATTCTGAATTAAGAATATAAATTATAAATATTCATATAAATTTATATAAAATAAAATTATGAAATACAATAGTAAAATCATTAGACACAAGACTAATAGCTCTTTAAAACAAATTAAAAATTATGTAGATAAGAAATTGTTAAATAGTTCTATAATTGACAATAAACTAGAAATGAATGACTATGAATTAATAAAACTTTATAAAATAAAGTTTTTACAATATATAGGATTTAGTTTAGATGATATCAAAATAATTTTTGATAATATGAAAGATATCGATATTTATAAAATGTTTAATTATTTTCTAATTACTGAAAATAATTTATTAAGTTGCTTTGAAAATAACTTTAAAACATTTTTAAATAGTAATTCTTTAATTATAAACATAGATACTTTTGGTTACTTTAAATCTGAATCATTAGGAAGAGGTGTTATGTTTGAATTATATAATTTTAGAAAGATGTGATATCAAGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATGGTACCCTGTAAAATTATGTAGTAGTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTATGGTACCCTGTAAAATTATGTAGTAGTAGAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [88.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //