Array 1 55071-51921 **** Predicted by CRISPRDetect 2.4 *** >NZ_LRDU01000013.1 Acinetobacter baumannii strain AB3340 LV36_contig000013, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================================================================== ================== 55070 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 55010 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 54950 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 54890 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 54830 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 54770 30 100.0 88 .............................. GCTCATCAATACAGCTACAAGAAAATTTGTGTTCATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 54652 30 40.0 30 NNNNNNNNNNNNNNNN............AG CATAAGCATAAAAATTATGTGTGAATATCA 54592 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 54532 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 54472 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 54412 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 54352 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 54292 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 54232 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 54172 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 54112 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 54052 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 53992 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 53932 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 53872 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 53812 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 53752 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 53692 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 53632 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 53572 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 53512 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 53452 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 53392 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 53332 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 53272 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 53212 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 53152 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 53092 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 53032 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 52972 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 52911 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 52851 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 52791 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 52731 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 52671 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 52611 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 52551 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 52491 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 52430 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 52370 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 52310 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 52250 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 52190 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 52130 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 52070 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 52010 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 51950 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== ======================================================================================== ================== 52 30 94.3 31 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:-0.07, 8:1, 9:0.26, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //