Array 1 126079-123431 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFVD01000001.1 Campylobacter sputorum biovar sputorum strain NCTC12475, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 126078 30 100.0 35 .............................. CTCAAATATGGTAAATAGTTTTGATAATCATTGGT 126013 30 100.0 34 .............................. ATATAACCAAAAAGGAATTTACAAAACTTGTAAA 125949 30 100.0 36 .............................. CTGGTGTTGGGATGGCAACTGGCTCAAAAACCGCTT 125883 30 100.0 36 .............................. AATTTGAAGTTGGAAAAAAAATACCCATTGAAGTAG 125817 30 100.0 34 .............................. TAATTTTCACAATGAGTATGTTGGCATAGATAAA 125753 30 100.0 35 .............................. AATACTACAGCTTCTTTGTATGATAGCTTTGCAAT 125688 30 100.0 36 .............................. TGAGCTACATAAAGAATACGATCTAGGGCTAGAAGA 125622 30 100.0 34 .............................. GAAATCTGTTGTCAGTCTATAAACGAGATTAAGG 125558 30 100.0 37 .............................. TGCGATTAAATAGTGCATAATGTCTTTTTGTGCTAAA 125491 30 100.0 38 .............................. CGATGATAGTTATATAGATGATGAAACTCCTAAATTTG 125423 30 100.0 35 .............................. GATTATTTAGCTGCTTTTCTAAATTACCACTAATT 125358 30 100.0 36 .............................. CTAAGTGTTCCAAACTCATGCTTAGTTCTCGATATC 125292 30 100.0 38 .............................. TCGATATGCAAGAAAATATAAAAACAGCTAGGCAAAAC 125224 30 100.0 36 .............................. TAGCCATACCATCTATTACATTTATGGTTCTTTTGG 125158 30 100.0 34 .............................. ACTTATCACTCATTTTCCCGCTATCTTTTCTTGA 125094 30 100.0 34 .............................. TTAGAAAAATAAGGAGGATAAAATGATAGAGATG 125030 30 100.0 34 .............................. ACTTATCACTCATTTTCCCGCTATCTTTTCTTGA 124966 30 100.0 34 .............................. TTAGAAAAATAAGGAGGATAAAATGATAGAGATG 124902 30 100.0 35 .............................. CTAGCACTTCGCTTTCTAAACTCATAAGTGTTCCA 124837 30 100.0 36 .............................. ATGTCATTAGAAAATGTATTAAACTCATCATTTATC 124771 30 100.0 37 .............................. ATGAGATGAAATTAGAAAATTATAAAGATAGATCAAA 124704 30 100.0 34 .............................. TATAAAGAGCAAAAAGAAGTAAAAAATGGCTTGA 124640 30 100.0 37 .............................. TAGATTCTGATGTATCCTCTTTTGTTGAATGGTTAAC 124573 30 100.0 35 .............................. GATATTCAAAACTGGGATTTTTGGGTTGGTATAGA 124508 30 100.0 37 .............................. ATAACTTTGTTTTTAGCATATTTCTTTCTCCATCCAG 124441 30 100.0 35 .............................. TTAATTTGGTTGTAAAACATGATTTAGATATTAAG 124376 30 100.0 36 .............................. CAATAAAAGCCGGTTGGAATATACCAGCCGTTTTAA 124310 30 100.0 35 .............................. GCTACAAAAAACGAAATACTTTTAAAAATACTTGA 124245 30 100.0 35 .............................. AGTTCTCAAGAAGCTATGTTAAATGTAGTATCAAA 124180 30 100.0 34 .............................. ACTATTTCAACTATTGTTTTTATGATATTTTTTA 124116 30 100.0 35 .............................. TTTAATAAAAGGCAATTATGTTGCCCCCCCCGACA 124051 30 100.0 37 .............................. TTTCGCCATAACTAAAATTTAAAGTATGCCCAACAAG 123984 30 100.0 35 .............................. TACGCCACAACAAAAAAAGGTATTTTTTGAGAACA 123919 30 100.0 35 .............................. GGTTGTAGTTCAAGGAACAAAGAAGAGTTTTTAAA 123854 30 100.0 34 .............................. TCGCTAGAATTATATTTTTCACCAGCCCAAATAG 123790 30 100.0 37 .............................. CTTCCATAAAGCTAGATAATGCCGTGCTTTGCTCTTG 123723 30 100.0 35 .............................. TGGAGATGTATCCAAAAAAGCCCTATCCAACATGA 123658 30 100.0 37 .............................. AAGGAAGATGATTAACTAAAATTGAAAGAGTAGGTAT 123591 30 100.0 35 .............................. TAATATGTTCTTTTTCTTCTTGTGTGTATGGTAAA 123526 30 100.0 36 .............................. AAGCTTCATCACTTAAATAATCGTGAACTACAACGG 123460 29 86.7 0 ..........-.C............T...T | A [123442] ========== ====== ====== ====== ============================== ====================================== ================== 41 30 99.7 35 GTTAAAATTTGATCCTATGGATTTTGAAAC # Left flank : TTAGGGGATAATTTGATTTTTAATATGCTAAACAAGGATGAAATCACAGCAAAAGACTTTAAAACTGATGCTGGAAGGATAAGATTTACAAACGAAGCAGTGCAAAAAATAGAGTTAAATATGATAAAAACCCTTACTTCGCAGGTAAAATTTGAAAATCAGCTTCTAACTTACAGGCAGATAATTAGGCGTGAGGCAAATCAGATAAAAAAGTGTATTTGTGAGAATTATCCCTATGAAGGGTATGTTGATTAGTTTTATTGTGCGTAAGGGAAATTTTGTATTTTTTGAGGATTAGTTTTTAAAGCTAAATTTGGAATTATAAATTTTGGTTGGCATTTTGGTAGCGGTCAAACTTTTTTTAAAGCTAAATTTAAGTTTATACGAATGCCTATATTTAGCTATTTTGTTTTATAGACATAGCTTTTATAAGCGGCTTTTAAGCTGGATATATTTATAATAATCTGCAATGGCTGCCGATATATGATGATTTGGTTGCT # Right flank : CCAGCAATCTTTGCGGTAATAGTATCAGACGACATTCAAAATGGGGATATATAATCAAAAATAGTAAAAATCCCATTTTAAATGCAAATTTAAAACATTTAAACACTTTTTAAGCCAATTAACATCTCTTATCAACCCTACAAATTTACCTATTATTTGACACTCACATTCATAATATCTAACAGGTGTATATAAAGGATTATAAGATACTAGCATAAGCTCATTTTCTTGTTTATAGCACTCTTTTATTACAAGTCCATCTGGTGTATTGATAGCATAAATGCTTCCATCTTTGTATATTATATCAATAGCTATAATGCATAAGTCGCTTTCCATGATATGAGGTTCCATACTATAACCCATACAAGAGATTATATCAACTTGATGTATAGTGCCACAATTACTAATTTTTTGAGTATTTTTTTATCTATTATTACTTCATCAAGCTCATTTTCATCATTATATTCTCCACTATCAAGACTAGCTTTTAAGCTAGACAT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATTTGATCCTATGGATTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.60,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //