Array 1 35125-32390 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNTX010000004.1 Lactobacillus delbrueckii subsp. lactis strain DSM 20073 DSM20073-i1-1_scf4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 35124 33 100.0 38 ................................. AATCGGCCTGCAGGAGGGCGTTTTGGCCAGTTGACCCG 35053 33 100.0 33 ................................. AATCCGTCGCGCTTGATTACTAAGTCAACCGCT 34987 33 100.0 33 ................................. TGGCTACCACCGGCCTTAGGAAAGGCGAAGCAC 34921 33 100.0 35 ................................. CGGACTTGGCCCTTAATTAACTCCTCTGCGCTACC T [34920] 34852 33 100.0 34 ................................. ATCGGGTCATTTGCACCGTAAAAGTAAAAAGCTG 34785 33 100.0 33 ................................. TTAACCTCATCGACAAACTGGTCGTGCGTCCGG 34719 33 100.0 33 ................................. ACGGTCAAGGTCTACGGCCCTGAAGCGAGGGTT 34653 33 100.0 33 ................................. TGTAGAAAGCAAAAAGTGGATACTTTAAGCCAG 34587 33 100.0 36 ................................. AGAATTAGAGCCAAAGTTGGTCTGCATCTCTGCCCC 34518 33 100.0 35 ................................. TTTAAAGACATGGTCACCCAGGCAACTGAATCCTT 34450 33 100.0 33 ................................. ACAGTGTCCTCCGGATCACCCCCACAGAAGTGA 34384 33 100.0 34 ................................. TGAGCTCTAACCCCGTTTCCAGCTCTACGTAGAG 34317 33 100.0 34 ................................. CCAGCAGACCAAGGAAATCTTTAACTCAGTTGGC 34250 33 100.0 38 ................................. ATTTACCGCCCAAACAGCCAACTTGCCAATTACATCAA 34179 33 100.0 38 ................................. AATCACCCCTTAATGAAGTAGACACCGGACTTGTCAGC 34108 33 100.0 35 ................................. ACTGTCACACCGATCGACTGGGGTTACTGGGGTGA 34040 33 100.0 35 ................................. TTCCAGGCCCCGTAAGCAAGCCTTAGTTCGGGCTT 33972 33 100.0 35 ................................. CATAACCGTGTTTCCACTGCTTAGACTCTCGCCTA 33904 33 100.0 35 ................................. ATGTCAGTGATGTATTTAGCATGATTGACCGTTAC 33836 33 100.0 35 ................................. AAACTTTACTCCAGGATTATGACCTGGAATGCGAC 33768 33 100.0 38 ................................. ACATGAAACAAATATGTCTGGTCAAAAAGCAGAACCAG 33697 33 100.0 33 ................................. TGGCATGTCCATTGGGGTTGGAACCAAGGAGAA 33631 33 100.0 33 ................................. TCTACCTGGGTGATGTAGGAAGATCTGGTTTGA 33565 33 100.0 35 ................................. AACATCAAAAACGGCAGAAATGTAAAAGTTCCGGT 33497 33 100.0 34 ................................. TCTTGCTCGGTGCGGCTGTCCTGGTCGTAGCTGT 33430 33 100.0 37 ................................. CAAACGTAAGCAGCATTGTCTGAAAAGTAGAGGTCGC 33360 33 100.0 34 ................................. GGCTACGGCGACACGGAAGACGCGTCACAGCCTG 33293 33 100.0 33 ................................. TGTGGATCCTTAGCGCCATCTACCTGAATAGCG 33227 33 100.0 33 ................................. TTTACCACCGTCACGCTTTTCTTGACCTTTTTG 33161 33 100.0 36 ................................. AACTACTACTACCAGCACCCAAACAAAAGACTTTTT 33092 33 100.0 36 ................................. AACTACTACTACCAGCACCCAAACAAAAGACTTTTT 33023 33 100.0 33 ................................. CATGCCGCGAGCTCAGCCTTTGAGGACTCACGT 32957 33 100.0 33 ................................. TGCTGCTCCAGGCTGAGACGCGTCTTCCGTGTC 32891 33 97.0 33 ....................T............ AGTTAAACAAACAGCCGACAGCCTCAACGCCTA 32825 33 100.0 38 ................................. GTTCTCCGTAGCCTGGCAAGGTGCCCAAGAATCTGTCC 32754 33 100.0 33 ................................. GTCTTTCTTTGTTGGGACGTGCAATTTGGTGAT 32688 33 100.0 34 ................................. ACTGCCGACCGCTGCCACGTAAACTGCGTCTTGA 32621 33 93.9 33 ..............................G.G GCTGAAGGGAAAGTAGCAGCAGAAAGAAGAAGC 32555 33 93.9 33 ..............................G.G GCTGAAGGGAAAGTAGCAGCAGAAAGAAGAAGC 32489 33 100.0 34 ................................. ATTTGCTGGTACAAAAGTAACAGAGTTACAACAA 32422 33 84.8 0 ..........A...AA....T......C..... | ========== ====== ====== ====== ================================= ====================================== ================== 41 33 99.3 35 GTCGCATCCCGCATGGGATGCGTGGATTGAAAT # Left flank : CGGATACCCTCCGTTTTTATGGAAGTAAGTGATTGTAGATGATGATGGTAATTGTCAGTTATGACGTGAATACTGAAACTGCTTCGGGAAAGAAGAGACTAAGAAATGTTTCCAAAATATGTAACGACTATGGCCAAAGAGTTCAAAATTCAGTATTTGAGTGTCTTGTAGATTCTACAAAGCTTGAGGAAATGAAGGAACGCTTACTAAAGGTATATGATGAAGAGTGCGACAGCTTGTACTTCTTCAATGTAGGCAAAAAATATGAGAACAAAGTTCAGTCTTATGGGTGTAAACAAGTATTAGACTTGGGAAAGCCAGTTGTCTTCTAATTATCTAGACAGTACGAGTGTGAAGCTAACAGAATTAGGCAGAGGATTCGCACTGTTTTTGACTATTTTTTTGTAGTCTTGAATATAAAATTGCAGTTTTTTAATGCTTTTTATATTTTGTATGCCCAATATTTAGCTGTGAAAATGCTTTTTTAACTAAATGTTGCG # Right flank : ATCGCTTAGATATGTGGATGCTTGATGGTCAAATTCCACTAAAAGCACTCCCTCGCGGGGTGCTTTTTAATATTTTGCTAAATCAAACGCTTCACCAAGCAAGCAGGAAAAGATTATAGTAAAATATACTGGTTATAAAAAAGCTGAGTCAAGCTCAGCATCCCCAAAACAAAACTTAGTTGAGGAGAATAAACATATGCAAGATATTTATATTGTTGCGGCCAAGCGAACTCCATTTGGCCGTTACCACAAGCAATTGGCTGACTTTTCCGCCATCGACCTGGGCCAAATCGCCCTGCACGGCGCATTAAAAGAAGCCGGCCTTGACGCCGAAGCCCTGGATGCCCTCTTCATGGGCAATGTCCTGTCTGCCGGCTTAGGCCAAAACATGGCCCGGCAAGTTGCCCTAAATGCCGGGATGCGGCAGGACTCAGTCGCCGTGTCCATCAACGAAGTCTGCGGTTCCAGCCTCAAGGCTGCCCGCCTGGCTGAAGCTCAAA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCCGCATGGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCATCCCGCATGGGATGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.60,-9.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //