Array 1 1047321-1046355 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB851046.1 [Clostridium] clostridioforme 90A7 acsOa-supercont1.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 1047320 33 100.0 34 ................................. TTGTTTTGGTTGGAACTGTTGTGTATATAGCTTC 1047253 33 100.0 33 ................................. CCATCCATCCGGGATATGGAATGGATTTATTAC 1047187 33 100.0 33 ................................. TTACCGCCTTATCCTCTTCCGGCTCTCCCTCCG 1047121 33 100.0 34 ................................. TAATGTATCCCCTATCATGGAGAAAAGCGAAAAA 1047054 33 100.0 35 ................................. AAATGCAGTAAGGTTATTGTCAATATCCTCTATAC 1046986 33 100.0 34 ................................. GGGTGTGAAATAGTCAATCGGCTTTTTGGTAACC 1046919 33 100.0 35 ................................. TGATTTTGTTATACTGTTGACTGCCTGGACCATTG 1046851 33 100.0 33 ................................. ATACTCTGCTGTGTGGGCAGCCATGACTGCACG 1046785 33 100.0 33 ................................. GGATGTATCTCACATTTAAGGGAGGATAGTTAT 1046719 33 100.0 34 ................................. GACTATCTGGCAATCCCAACAGTGGAAACGGACG 1046652 33 100.0 33 ................................. TTCTTAAATTCCTTGGCCATCCCTTCCATAAAC 1046586 33 100.0 34 ................................. TCATCTGAGATATCACAAATAGTTGTAGACCGGC 1046519 33 100.0 33 ................................. AATTTACTATCCTCCTATACAGACACACGCACC 1046453 33 97.0 33 .........A....................... TTATGACAACTTTGGAAGCCCATTGAACCACAC 1046387 33 81.8 0 ......................CA..CCA...G | ========== ====== ====== ====== ================================= =================================== ================== 15 33 98.6 34 GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT # Left flank : AAGTTCTGGAACTACCTGAAAAATGTGGATTTCTGGCAGTGGCCGGAACAGCGGTGGCCCTGAAGGCGGGAAAGCTGGCTGCTGTAATGGAACGCCAGGGCAGAGTACTGCGTATTTACAATGCAGAAGATATGAAGGAAGTGATGGCGGAATTTGTCCGTGCGTTCAAGCAGGGTGCCATATATCCGGAACAAAAGAGGCTTGTATTGAAAGAGTATCCGGCGGAGGCGGCAGAGGCTTTGCAGCATGCAGGATATATGCGGGAAATGAAGGATTATGTAATATATAAGTAGAGTTGGTTTCTGTGAGTTGGGAGCCCTTCAAACCAGGTGCGAATGCCAAGCTGACATGAAATGCCTGGGAGATTCGCACCTGAAAAACAGAGGAAAAGGCTGTGAAAGCGGGCTGGGTGAATGGACTGAATTGGTTGAACTGGGGAGAGAAGAGCATAATGCATAAAATGTTAGGGGGGATGTGGAGCAGGTTTGGATAATTTTGCT # Right flank : ATACCTGTAAGCCCCTAAATTGATGCAAAAGGAAAATTGCTCCCCACGTACCTAATGCATTGAAAGCAGCCATAATTATATATTGAGAATTCGCAAAACATCAGTTAAAAGAACATATTAACAGTATCCCGGTCAACAGGGAATCCGTTAAGCGCATACCACCCCCCCCCAGCAAATAACATCCGCCCCAAAAAACACCAACATAAACAAAGGAGTAACACATATATGATTGAAATAATCTATAAAGACAAACGCTTTCTTGTTAAGGGCAGCTTTTCCATAGGAATAGCAGGAAACTATGTAAATGAGGATTTTGGGGACGAGAATATCATGATTAACGATACGTTAGAGGAAATCATGAAAGAATTGAAGGATGAGGACTCCTTTTGGTACAAGCCGCTGTTTCCCTATCTTAAATCTGAGACAGCAGACAGTGGCGGAATAGCCAGAGGTCTTACCGCGTACTACAATCAAAAGGAAAAAGAAATCAGGGAGAATGA # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGAGGCTCGCGAGAGCCTTGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.00,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 306891-308198 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB851045.1 [Clostridium] clostridioforme 90A7 acsOa-supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 306891 33 100.0 34 ................................. CTTGGGATTGAGTGAGTGGTTGGCATGGCTGCCG 306958 33 100.0 35 ................................. ATCTGAAGGGATAAAGAGGGATTTTAGCCCCTCTA 307026 33 100.0 35 ................................. CGCTTGTTATACTTGAGTGACAATTTGACCATTAA 307094 33 100.0 34 ................................. GACAAAACCGCCACGGCCATATGAAATATCAACA 307161 33 100.0 33 ................................. TTACTCTCTGTAACATAAAAACACCTCCTAAAA 307227 33 100.0 33 ................................. CGTAAGGGAACCATTCAATCGGTCGTTATCAGA 307293 33 100.0 34 ................................. TTCTATACAGAGTTTTAATCGCGCCTCCAATTCA 307360 33 100.0 34 ................................. ATCAAGAGAAAACAAACAGTATTCCGTGCTGGAA 307427 33 100.0 36 ................................. ATTCCACTGCCTGTCAGCCATGGACTTATACATATC 307496 33 100.0 34 ................................. CCTCTACCGGGATAGTGATAAGCTGCATAAAGCC 307563 33 100.0 34 ................................. AACCATGATAGACGGTAAGAATGTAGAACATACA 307630 33 100.0 34 ................................. AATTTTACATAATTGTTCATATAGACTCATACAG 307697 33 100.0 33 ................................. CACATTTTCAGATGCAAACCGATTTAAAGATTG 307763 33 100.0 33 ................................. TTTCTACGTCGTTAAAAAGGTGCGCATATGTTT 307829 33 100.0 34 ................................. GTTTTGTTCCCTCTGCTGTGCAAGCAGCTGCTGG 307896 33 100.0 34 ................................. AGGAGGAGTTTGGCCGGCTCTTGAATCTACTGGA 307963 33 100.0 36 ................................. CCTGGACATTGGGAATGTGTTTAAGGTCTGGAAGTA 308032 33 100.0 34 ................................. GACAGCTCCTCTCAGGCCCACCAGCGACATAGCC 308099 33 100.0 34 ................................. ATTATGATGAGACATTTGTTGTTGATATGTCGGA 308166 33 81.8 0 .............C...........A..TTCC. | ========== ====== ====== ====== ================================= ==================================== ================== 20 33 99.1 34 GTCTCCGTCCTCGTGGGCGGAGTGGGTTGAAAT # Left flank : TGCTGATACTGATTACATATGATGTGAATACGGAAACCGCTGCAGGCAGGACCAGGCTGAGAAAGGTTGCAAAGCAATGCGTTAATTACGGCACCCGCGTCCAGAATTCTGTATTTGAATGTATTTTGGATAATACCCAGCTGATAAAGCTAAAAGCCATACTGACAGATATCATTGATGAGCAGACGGACAGCCTTAGATTTTACAACCTGGGAAATAAACACACTACAAAGGTTGAACATGTTGGGGTGAGTAAAGGGATTAAAGTGGAAGAGCCGCTGATATTCTGATCTGGCTGCGGGTGGTAAGGAGGTTTCAAATAGTTTGGTGCGAACCAGAAGCAAACATGAATTTACGGGGGGATTCGCACCGGAAAAACTGCACAATGAGAACGGTTTTGGATGTGTGCAGGGTAGGTTGGCGGTGATTTGAGGGGGTATGATGTGATTTGATTGTGGAAATGTGATGAAGAATTGTTGGTTTTTTTGTGTAGTATTGCT # Right flank : TTTCCGGTCAGTCTCCGCCCTCACAGCGAAGTAAGCTGAGAAGCCATCAAATTCAGGATTACGTTTAGTCAAAACATCATTCCCCTTTTTCTAAGAAAACAGTATAGTTTGAACCATAAACGTTAGCTATAACTAACAACACGCAGCAAAAAAGGTGGGCGAACACCCACCTTTGCCATAAACCTGTTATAGGGTATAAAGAATGCGGGCCTCCCTCACCCTTTCCATGCCCGAATCTCTCTAAGCCCCGGCACCAGCACCTTGGCGCTGGTTTCCAGAATGATCCGTCCTTTTTCAGCCGTGGCGCCTGACGGGTCTCCGCCGATTCCTATGGGTTTGCCGTCTGCTGTTTTCCAGTCCTCGGATACCCAGCCAATGGATACGTTTCCATAAGGCCTCAGTGCCTGATTGTCCTTAAATGCAGTCGGAATTCCTGCCTCTGAGGTATCTAACTTTACCAGAGACGGGTCCACAGCCATGACCATGGAGGTTTCCATCTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGTCCTCGTGGGCGGAGTGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTCCGTCCTCGCGGGCGGAGTGGGTTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.60,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //