Array 1 59976-59213 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CAAIJK010000006.1 Streptococcus pyogenes strain K24525, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
     59975	    32	 100.0	    34	................................	TTTTATTTTTGTAAAAAGGCTTACCAGTGAGATG  	
     59909	    32	 100.0	    35	................................	CTGTACCTTGCGTTACCGTTATGCCGCTTGGACGG 	
     59842	    32	 100.0	    34	................................	ATATCAGACCACTGAGGAGACTTAACGAGCGATC  	
     59776	    32	 100.0	    36	................................	ATACTTAGTACCTGACCAATCCTTGACTGTGTTATC	
     59708	    32	 100.0	    35	................................	TCGTCATAGGCATTGCCAATAGAATCAGAAAGGTT 	
     59641	    32	 100.0	    34	................................	TTTTATTTTTGTAAAAAGGCTTACCAGTGAGATG  	
     59575	    32	 100.0	    33	................................	TTATTGGCCCTGCGCCAGTCATCAACTAGCCCT   	
     59510	    32	 100.0	    35	................................	CTAAAATATCCCTCATTAGCAGTGAGCTTATTAAA 	
     59443	    32	 100.0	    35	................................	TTAAATTTAGTATCTAATTTTGATTTTGCATCCTC 	
     59376	    32	 100.0	    35	................................	ACCTCTCATAATATCTTTAAGTTCTCTTACCTCAC 	
     59309	    32	 100.0	    33	................................	TATCTGATTTTTAAATCTGAAATAACTTTTAAA   	
     59244	    32	  96.9	     0	...............................G	|                                   	
==========	======	======	======	================================	====================================	==================
        12	    32	  99.7	    35	GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	                                    	       

# Left flank :   AAGGCCATACGAGGAGATTTAGAAAGCTATCCACCTTTTATGGTTTAGGAGATGTTATATGATGGTTTTAGTCACTTATGATGTAAATACGGAAACACCTGCTGGTAGAAAAAGATTGCGTCATGTTGCCAAACTCTGTGTGGACTATGGGCAACGTGTTCAAAATTCTGTTTTTGAATGTTCTGTGACACCCGCAGAATTTGTGGATATAAAGCACCGCTTAACACAAATCATTGATGAGAAAACTGATAGTATTCGCTTTTATTTATTGGGGAAAAATTGGCAGAGGCGTGTGGAAACACTTGGTCGCTCAGACAGCTATGACCCAGATAAAGGTGTCTTATTATTGTAAAAATCTCTTGTGCGAAGCTAGCTTTCACAGAAAAACCTTGCTTGCTCGCGCAAAAATAACTTAAAAAAGAAGCGAAATGGAGATAAAAAGGCTTAAAACACCTCTATGTGTGCCATCCGTTTCTCTATAAACTGTGTCATTTGGCGCA
# Right flank :  ATGAATCCGACCTCTCTTTTAATGAGGTCGGGTTTTTACATGCCTTTAGTCAACCATTTATCTGATAGCGTATCAAATTCAAGTTTTTGCATGTTCTAGTCTATGGTTTGCGCCACTAGCTTTCGGTAAACTAAGGGTAACTTAAGAGAGGAGTTATTTATGACACTATCACTTGTATTAATGGTATCGGTTTTTGGGGCAGGCTTGTTATCCTTTTTCTCTCCGTGTATCTTTCCGGTCCTTCCTGTTTATTTAGGTATTTTACTGGATGCAGATGATTCAAAGACGATTACTATATTTGGTAAAAAACTCTATTGGTATGGCATTGTCAAGACCTTAGCCTTCATTTTTGGGTTATCCACTATCTTTGTGATTTTAGGTTATGGGGCTGGTTTTTTGGGAAATATCCTTTATGCGGTATGGTTTCGGTCCTTCCTGGGAGCCTTGGTCATTATCTTGGGGATTCATCAGATGGGCCTCATTACCATTAAGAGCTTACA

# Questionable array : NO	 Score: 9.25
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCACCCTTCATGGGTGAGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.12%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-4.70,-5.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : NA
//