Array 1 31373-30551 **** Predicted by CRISPRDetect 2.4 *** >NZ_RPSH01000041.1 Bacillus sp. 2B10 N44, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 31372 29 100.0 32 ............................. GCGCGGAACGCATCGGTCGTACCGTCGCCAAG 31311 29 100.0 32 ............................. GACGTCCAGCCGCAGCACGCCCATCAGCAGCA 31250 29 100.0 32 ............................. GATGAGCGCGGCGCTTATGGGACGCTGCACAT 31189 29 96.6 32 .C........................... AACACCCATTCCGGGTACCAGGGCGGCGACGA 31128 29 96.6 32 .C........................... CGTTTCGTCGCTGTCGTTCACCCGGTCGTGAT 31067 29 96.6 32 .C........................... CATCAATGGGAGACGACCACATGCAGACGATC 31006 29 96.6 32 .C........................... GCCGGAGAGCGATGGCCGGGAATGAGTCCACA 30945 29 96.6 32 .C........................... TAGTCCCCAGTAGTCCCCAGCCTCCCCAATCG 30884 29 96.6 32 .C........................... GACGTTCGCCGCTAACAGGGGGTCGTGAACCG 30823 29 100.0 32 ............................. ATGCCCATGCCGGCCGCCGTTTTATTCATCGT 30762 29 100.0 32 ............................. CGCGCAGGCGAGGCGATGCCCGCCAAACTTCA 30701 29 100.0 32 ............................. TGGGCGCATGGGTGCGGCAGGGGGCGGATGGC 30640 29 100.0 32 ............................. ATGGCTGGAGCGGCTTCACCCTCACGATGCGC 30579 29 86.2 0 .C..................A.A.....T | ========== ====== ====== ====== ============================= ================================ ================== 14 29 97.6 32 GTCTCCCCCGCACCCGCGGGGATCATCCC # Left flank : CATGACCCCCGACCCCGC # Right flank : TGAGCAGAACCCCAGCCTCAGCCGTCGGGCGGCAGGCTGACGAACAGCCCGCTCGCCACGATCGTGCGCATCGCGGGCATCAGCCACAGCGTTTCCAGCACAGCGGACGCACTTTCTACCCCCGCCCCCGGGCGCAGGCCGAAGACCAGCATCACGCCAACCGGCGACACCATCGGCGATCGCCCCGTCCGTCCACTCGCGCGATACCCCGCCCCGCCGCTGACCCTGGCGGGGCGGCACCGGTTACTCCGCAGCCTCCGCGACTGGCGCAACGCTTTCCTTCCACGCCAGCACGGGTTTACGTGCCGCCAGCGTCTCGTCGAGGCGGCGGCGCGGCGCGAAGTGCGGTGCCGACTTCAGCGCCTGATCGCCCGCCTTGGCGCGTTCGCCGACTGATTTCAGCGCACCGATGAACTGGTCGAGCGCCGCCTTGCTCTCCGTCTCTGTAGGCTCCACCAGCATCGCGCCGTGGACGACCAGCGGGAAATACACCGTCATCG # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCCCGCACCCGCGGGGATCATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACACGCGGGGATGATCCC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [28.3-10.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1332-22 **** Predicted by CRISPRDetect 2.4 *** >NZ_RPSH01000051.1 Bacillus sp. 2B10 N54, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1331 29 96.6 32 ............................G TCGCTGGGCCACGCGGCGCTCGACGAACTCAC 1270 29 100.0 32 ............................. GTCGGGATGATCCCGTTCACCCGGTCGCGGCG 1209 29 100.0 32 ............................. CCGCGGCCGGTTAGCGACTCCACCGCATCGAG 1148 29 100.0 32 ............................. TCGTCTTTCTCCTTCTTGTCGTCGGCGCCCGC 1087 29 100.0 32 ............................. GGGGCGAAGCTCACGGGTTTGCCCCGGCCGCT 1026 29 100.0 32 ............................. TGCGCATCCACCGTGACCGGGTGCTGATCTTC 965 29 100.0 32 ............................. AGCAGGCCGCTGACTGCGGATGACAGGTTGAT 904 29 100.0 32 ............................. CCTCGCCAGCACGGCGTGTGGAATGCTGAGAT 843 29 100.0 32 ............................. GCGGTCAGCGGGGAGGTCATGCGGGCCCCCTG 782 29 100.0 32 ............................. AACCTCCAACGTGCCTTCGACCTGCTCGACTT 721 29 100.0 32 ............................. GGGGCGAGCGGATGCGAACGCCGTTCTGCTGA 660 29 100.0 32 ............................. AGAACGCCGTGACCGGCCGCCGACGAGTTTGG 599 29 100.0 32 ............................. CTCCGGGGTCAGCATGTCGACGATCGGATGAT 538 29 100.0 32 ............................. GCCGTGTTCGTGTTCAACCTGTCCGGCGGAAA 477 29 100.0 32 ............................. TGGAGAGCGTGGCGGACGTGGTCACAGTCGCG 416 29 100.0 32 ............................. ATCGGGTTGGGCCGGGACGTATCCGGCGAATC 355 29 100.0 32 ............................. CGCTTGGCCGGTATCGGTTACGAGTGGCACCG 294 29 100.0 32 ............................. TGGCGATGGCTTCGCAGACTGGCAGCTTTGCG 233 29 100.0 32 ............................. TGTGCGGCCAAGGTCAGCGCGGCGCGGACATC 172 29 96.6 32 ............................A GCGCAGCCTCGTACTCGTCAATCATGTCCATG 111 29 96.6 32 ............................T TGTGTGACGACGGATACGCCGATCATGCTGGC 50 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.5 32 GTCTCCCCCGCACCCGCGGGGATCATCCC # Left flank : CGCAGCGTGATCCCGGGCATGATCGACCGGATCAAGACGCTGCTGATGCCCGGTGAAGCGGTTGCGGCGGACACGGGTGCGGGGGTGGCGACCTGATGCCGCTGACCGTCGTCATCACCCGCGACGTCGAGGACCGCTATCGCGGCTTCCTCGGCTCGGCGATGCTCGAACTGGCGCCCGGCGTCTATGCCCAGCCGCGGATGAGCGCGGGCGTGCGCGGCCGCATCTGGGCGGTGGTCGAGGAATGGCATGGCCGCCTGCGCCGCGGCAGCATCGTGATGTGCTGGGCCGAACCCGCCTCGGCGGGCGGGCTCGGCCTGTCGGTACTCGGCGAACCGCCCAAGGACGTCGTCGCGCACGACGGCATCCTCCTGGTCCGCCGCACCCTCTCGGCCTCGCAACAGCCGGCCGGCTGAGGCACGTCTTTGACATCGTGAAGAATGTCGAATTGCAACCATGTCCCCGACATGGCAAGCAAGTTGAACATCTTGCGCCCAAGA # Right flank : CCAGAAGGCCACCCCATGACCC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCCCGCACCCGCGGGGATCATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [2-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [11.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA //