Array 1 13235-13865 **** Predicted by CRISPRDetect 2.4 *** >NZ_PTUF01000021.1 Enterococcus faecalis strain CVM N60100F N60100F_S47_L001_R1_001_contig_21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 13235 37 97.3 29 ....................................T TTCGATATCAATTCTACACGTGGTGATTA 13301 37 97.3 29 ....................................A CATAAATTTCACGCTTAGTCAATGCTAAT 13367 37 97.3 29 ....................................G TCTTTTTTCGTATAGTACACGTATGCCCA 13433 37 97.3 29 ....................................A TTTCAATTTGAATGCAAGTTTTGACTTGT 13499 37 97.3 29 ....................................T TGATCATTAACAAGGAGTTGCGCAATATT 13565 37 100.0 29 ..................................... CTGGTTTAACAACCAATGGCCAGTCGCAC 13631 37 100.0 29 ..................................... CTGGTTTAACAACCAATGGCCAGTCGCAC 13697 37 91.9 29 ....................A.........T.....T TCAACTTTAGAGATAATAACGTAATCTGA 13763 37 94.6 29 ....................A...............A CACTAACAGAATGGGGATTGTTGAGCTTG 13829 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================= ================== 10 37 97.3 29 GTTTTAGAGTCATGTTGTTTGGAATGGTACCAAAACC # Left flank : GTATATCCTCATCAAGTAGTAAATGCTTCTTTTGACTTTCAAGAGGGACGAACAACAGAAGGTGGAGAAATGACACACATGATTGGCTTTGCCACTTTGCAAGAAAATATCTATGAAGATTTGGAGCAACTAAGCGTACCTGCTCATACATGGGCGGTTTTTCCTAATGAAGGTCCTTTCCCACAAACATTACAAGAAACCTGGGCAAGGATATTCTCTGAATGGTTGCCTTCATCTGGTTACCAAGTCGTTGCAGCACCAGAAATTTCGTTTACGCAATATCAAGGACCAGCAGAAGCTAAGTACAGTGAAATCTGGCTCGCTGTTACAGCTACTAAATAAAGAAAACCCACCATTGAAAAATGGTGGGTTCTTCCGCCAAGAAGGAGAAAGTTTGGTATAATAAACGTGAAGAAAAAAATCAGACCTTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGACTACGGAATCATGGAGAAAAAAATAATTCTCCGAG # Right flank : CATATTGGGAACAATTAGGATATATGAGAAGTTTTATAGCCATGTTGTTAAAAAACAAACTATCACCACAAGCAATCCGTAATTTTCATCACAAGATTAGAATTTTTATCATCAAAGACGAGCTGCTTCAATTTTCGAAAACTAATCAAGTGATAAGTCAAAATGTTGATAGATTGAGATTAGTTCTTCCTTTTTTTAGGAAGGGCTTTTTTTATTGATAGAAGAAAGGGAAGAAATCTTGGTAGCACCTAAAAAAATTGTGAGAAATGCTTCTGTATTGTTTGGTTTCTGCCTCAGAAAGTTGTATACTTAGATTGGAATTATTCTATATTACATGCATTTTCACACTTTTTGGAAAAGTTCACTTGAATTTTCTTTTAGTTTCGTAGATAAAAGGAGTCATCGCTAATGGAAATGAACAATTCAGGTAAGCTTGTTTCTTTGTGTGGAGGCAAATCAGGGAGGAAATAATATGTTTGATATTGTAACATTGGCGAGAA # Questionable array : NO Score: 5.63 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTGGAATGGTACCAAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //