Array 1 3906-4526 **** Predicted by CRISPRDetect 2.4 *** >NZ_UYIN01000003.1 Clostridium carnis strain NCTC10913, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 3906 30 100.0 36 .............................. TCTTCATATGCTAGTGTTTCATCTTCTAGTAATTCA 3972 30 100.0 35 .............................. TCTCGTATGTTTTCTTCTATGAACTTAAAGTAGTC 4037 30 100.0 35 .............................. ATACGTTTTTCGTAATTTATTTTAAATATTTTTAT 4102 30 100.0 36 .............................. AAATATCAAACTGTAAAGTCCGCTTTCATTAATTAA 4168 30 100.0 36 .............................. AGATAGTATGTTAGCTCAATGTCATATTCAAATGTT 4234 30 100.0 35 .............................. TATGTTTTAGCTGCTTCAATAACTTCCTTATATTC 4299 30 100.0 35 .............................. GGAAACTTTGGCCACGAAGGAAGACCAGGTGAAAT 4364 30 100.0 36 .............................. AGGTACCAAATATCTTCTACCTTCCGATTAAGTGCT 4430 30 100.0 35 .............................. AATCCATTAGATTTCATATCTTTATCATCACAAAC 4495 30 80.0 0 A.....A...G....T.....A.......G | A,A [4515,4520] ========== ====== ====== ====== ============================== ==================================== ================== 10 30 98.0 36 GATTAAGATTAACATGAGATGTATTTAAAT # Left flank : GAATTTATTCCCTTCAGTTTAAAGGAGGGGATGTAGTGGGAAAAGTAACTAATTATAACTATGCATTTGTGTTTTATGATGTTAATGAAAAAAGAGTTCAAAGAGTGTTTAAGGTCTGCAAAAAATATTTATCACATTTTCAAAAATCAGTCTTTAGAGGAGAAATGTCACCGTCAAAATTAATTAGATTCAAAACAGAATTAAATAAAGTAATAGATAAAAATGAAGATTTTGTTTGTATAATAAAGCTTATGAATGATAATGTATTTGGTGAAGAAGTACTTGGATGTTCAGCCAATAATACAGGAGAAGATTTAATAATATAAATTTACCAGGTAGAAATTTCAGCTATCTTTGTTAAAGCTAGAAATGATAGGATATTTGATAGTTTTAACATATTTTTATCAGAAAAACTTCATTCCTTGGTAAATTTTTTGTGATGTGGTATTATTACAAGTATAGAGGAATTTTTGAAGTTTAAGAATGCCTAAATCGCGTTG # Right flank : GTATGAAAAATGGTAATAAATAAGCAGAGATAAAGAGCATAATATTCTTGATAAAATCAAATTTTAAACCTATTAACAGAAAGGAAAAACTGCCTATGCTAAATAAAATTGCATTGATTGTTATAGATATGCAGAAGGATTATATTGGAGAAGAAAGCAGACATAATTACTATCCTAATACACTTATAGATAAGGTTAATGAAAGAATTGCCATAACAAATAATAATGGACAAATGATTATATATGTTAAGAACAAGGGGAAGCGAAAAAAGGAAATATATATATCTGATTTTGTGAAAGGATTATCTATTGCTTCAAACTTTATTATAGAAAAAGGCAAAGCAAGTATGTTTGATGATGATATTTTCTTTGAATTGTTAAAAAATAAAGATATATGCAAAATAGAGACGATGGGAATTGATGGAAATTGTTGCGTTGCTTCTTCTGCCTTAGATGCAATGAAATTAGGTTTTTCAGTTATTTTTCCTTTAGAGTATATT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAAGATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 23387-23677 **** Predicted by CRISPRDetect 2.4 *** >NZ_UYIN01000007.1 Clostridium carnis strain NCTC10913, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 23387 30 100.0 34 .............................. TTCCAGTTGCATATCCTCCAGCAGTAGCCATATG 23451 30 100.0 35 .............................. CTAAATCTAATATACTTTCAGCATCAAAACTTGCA 23516 30 100.0 36 .............................. TTGCATAAATCGGAGATAATTCTTTTACTTTCTCAA 23582 30 100.0 36 .............................. ATCTTTATATCGTTTTAGCACAGATGCTACTTCAGT 23648 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 5 30 100.0 38 ATTTAAATACATCTCATGTTAATCTTAATC # Left flank : TACGCTTTGAATAATATTCAGGTATCTTATACGAATTGTGACACTCAATAACATTTTTAATTAACTCATCTTCACTTGTATCTTCAATGAATTCTCTTATTTTACCCTCTTCAAATAAAATCTCTACCCCAAGCCTAGCATGATCAATTGACTTAGAATCATTAAATGTTCCATATCTTCTTACCTGTTCAAATCTTCCTATATCATGTAACAGTCCAGTAAACCATGCAATATCAATTTCTTCATTTGTCATCTCTAAGCTTGGTGCTATTTTTTCACATAGTTCACTTACACGATATGTATGATCTATTTTTAATTTTATTTTTTCATTGCTGGTATCATACTTCTCAACATAATCATTAAATACTTTTTTAGATTTAATTTTGTCTATATACATCTTGCAGACTCCTTTATTTTTATAAAAAATCCTTTTGTATTATAAAACCATTAGTTTTATATTTTTAATATTTTACATAATAATTAGAAAGCTATTTAATCAT # Right flank : CCTTAGAAAAATAGCCATTCTAAAAATAAAAGAATTCTTCTATCCAAGAAATAACGCTATTCTTCAAAAAATTTACCAAGTGTTTTCTATTTTTTCATTTTTATTATAATGAACTCAGATAAAGTCACTATTGTTGCAGTGTTTTACCTAATTATAAATTAAAATCGCTTGGTAAATACAATGTATACTTTAATAAAACATCAATGATTATTTCACAAGCTTTTATTTTTATGGGCAATGTTTTGCTTCACATGCTTTATATCCTGCTGCTTGTGCTTTTGATCTGCTCATAGCTGTTGAATTTTTCATTCCATGAGCATTTGCTGTATTATGATATATTCCTTTGCTAGATACATAAACTGTATCTGATGCATTCTTTACAACTCCACTTGAAACATCATTATTATCAATAGTTGAGGGTGTATTTACACTAGTATTTTGTATTTGAGCTGGAACACTTGTTGTCCATGCACCATTACTATTTAAATAATATCCTTCAA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTCATGTTAATCTTAATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [86.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //