Array 1 54569-55130 **** Predicted by CRISPRDetect 2.4 *** >NZ_LOCK01000050.1 Desulfitobacterium hafniense strain DH Scaffold5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 54569 30 100.0 35 .............................. ATATAGATATCCAAGAAGCTGTTGACCTGGGCCTG 54634 30 100.0 35 .............................. CTCGAAGGGGCATTGCAATGGTGAGAGCAAGTAAA 54699 30 100.0 39 .............................. ACGAATGAAGCAGAACAACGATATGCCACGACCGAAAGT 54768 30 100.0 36 .............................. TTGGTATCGTTTTAGGGTTAACCATCACTCTTAGTT 54834 30 100.0 40 .............................. AGGGCAAAACAGTCGAATTCAGCGACGGTAGCATCATCAG 54904 30 100.0 36 .............................. TAGATTCCTCCACATGGACCGCAGGGTCAATAACGT 54970 30 100.0 34 .............................. ACTCAAAAAATTGTCATCCGTCCCGGGCTGGCAG 55034 30 100.0 37 .............................. TCTACTGTAGGCTCTATAATGGGTTGGGGTTTCATTC 55101 30 83.3 0 ....C........T...A...A.C...... | ========== ====== ====== ====== ============================== ======================================== ================== 9 30 98.1 37 GTTGTTAGCTTACCTATGAGGGATTGAAAC # Left flank : GGGGCCGAAAGAGCTGCTTCAATTGGCCGTCGATGGAGGAATAGGAAGTAAGAACAGCCAGGGATTCGGGTGTGTGGAGATTATAACTGGATAGTAAACGTCGTCGCTGGGTCTGTCCGAAATAGGTACGCGCGTACCTATTTCGGACAGACCTTTTCCTGGCAAAGTGATACTGGAGTTTGGTATTAAAGAGTTTACTTTTTCAATCATCCCAGAATTTCGATTTTGATCTAATCCCTTGCTGTGCTAATATTAGCATGAGAGATAGGGCTGATTTCGTTTTAGATAAACTAGCAGGTTTATTACTCCTACCACTAGATTAGGGGGAGGATAAAAGGCTAAGCTTTAATCGTAGCTCTTGTCGTCGATGTGCAGTAAGGTAAAATGCCTGGGGATCGACGACAAAGAATATGGCTAAATAAGCGGGCTAAGAAGAGAAGTGCTGATTTGGTTAATTTTGGTCAATGGCTGTAATGGCTTATTTAATGCTGGTGAAATGG # Right flank : CGTTTCATGGGTTCTATGGGAGTGTCACCCGAACTGTGTATCGCAAGATAGGGCAATGGTGGAGACTGACCCGAGCAGCGGTGCGGATTTTACTATGAAACGGATGGCCGACGCTGTCCGTTTTTTTCCGTTTCTACACATTAAGGGAATAGGCATAACCTCGGGTTCGACAGTCAAATTGCATTTCAGGCACATGGAAAAAACTGAGACCCATCAACCACGCGGGTTTAAGGGGTTATCCACAAGTGAATATCTCGAAAATACGTAGGCACACGAATATGTGGATAACTTTAAATATTATTAGATTATCTATTGATCGAGTAGGTACACAATGGTAAAATGGAATTATGTATATTCGTGTAACTTCTCGTAAAAACAAAGATTATAGTGTTGTGAAATATGTCCAATTAGCTCATAATGTCCGTAATCCGAAGACGGGTACACCGCAGGCAGAGGTGATTCATAGTTTCGGACGGATGGATGAGCTCGATATGGATGGC # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTAGCTTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA // Array 2 57696-59117 **** Predicted by CRISPRDetect 2.4 *** >NZ_LOCK01000050.1 Desulfitobacterium hafniense strain DH Scaffold5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 57696 30 100.0 35 .............................. CTATTCCGGCCGGACAGACAGCGGCGACAGTTAAG 57761 30 100.0 35 .............................. ATTTTAGAGGCCCTTCTTATAGTACAGGGTATGCC 57826 30 100.0 36 .............................. AAGGTCACCTCCCACTCAAAGCTATGGAATTTTTCC 57892 30 100.0 35 .............................. CTCTATGACAGACGAAAAGAACTTGAATCTCAAAT 57957 30 100.0 36 .............................. CACTTACAGGCATCGCAAGTATATCTCTGGTTCCCG 58023 30 100.0 36 .............................. TGCGTTCCAAAAAGTTTATACAGCGTGGATGGCAAA 58089 30 100.0 36 .............................. CTCTCAGTGGCAGGTCGTGGCGCATTGCATAAATCC 58155 30 100.0 36 .............................. ATTTCGCTAATGATTCTCCTGAATTCAGGCCATAAG 58221 30 100.0 36 .............................. AGATGGCAAAAGTTGCTTAACCCTGCTTCAAGTGGG 58287 30 100.0 35 .............................. TCACATCTAATGCCATGCCAAAGTAGGCACTATCT 58352 30 100.0 36 .............................. TTTCTGTTAGCCGGGTTCCATTCGTGACCATGCTGG 58418 30 100.0 37 .............................. CATTATGAATGGGCATTTGAGGTGGTGTGCTGATGTC 58485 30 100.0 36 .............................. AATGATATCTGCTATAACAATGTAGCATACAGGGAA 58551 30 100.0 38 .............................. TAGAATATATGAGTATAGTAGCCTGTAAATATGATGAG 58619 30 100.0 35 .............................. ACCACCCTCGAAGAGGCGGACAGAAAAAACGCCCA 58684 30 100.0 38 .............................. GCTAATGATAAGGTGGTGGTAGTGTAATGGCACAGTTA 58752 30 100.0 39 .............................. TACTCAATCGGCCTGGACGAACGTACCATGCCGGCCAAA 58821 30 100.0 37 .............................. TTTTTGTACTCTTCCCGGAGCAGAGCCCCCTGTGAGA 58888 30 100.0 35 .............................. CTTTTCACCTCCGTAACGAAGAAAAGAATATTGTC 58953 30 96.7 37 .................G............ AGCATATATGGAAGAAATACTTCCTCAAACTGGACCA 59020 30 93.3 38 .............T...G............ CCGGGTTTTGTGCGGTCCATCCTGTACCGCCTGGACGA 59088 30 90.0 0 ........T........G...A........ | ========== ====== ====== ====== ============================== ======================================= ================== 22 30 99.1 36 GTTGTTAGCTTACCTATAAGGGATTGAAAC # Left flank : TGTGCCTACAGACTGTCGAACCTGAGATAACAGCGGCGAAAGTATGATCCAGTGATTAAAAAGCGAAGTACTATTCAGGAATATGGTGGATAGACTATGCAAGATTAAAATGTTCAGTTATTGGAGTGCGGTAAAGGCGGCGGATATCATGTCGGGATTTGGAGGAGATGAAAATTGGTTGGTTCTTATCTGCGCCTTTTTCAACAGTCCCAGAATTTTGATTTTGATCTAATCCCTCCCTGTGCTAATATTATCATGAGGGATAGGGCTGATTTCCTTTTAGATAAACTAGCTGGTTTATTGCTCCAACCACTAGATTAGGGGTAGGATAAAAGGCTAAGTTTTAATCGTAGCTCTTGTCGTCGATGTGCAGTAAGGTAAAAATGCCCGGGGATCGACGACAAAGAACATGGCTAAATAAGCGGGCTAAGGAGGGGAGTGCTGATTTGGTTAATTTTGGGTCAATGGCTGTAAGGGTTCATTTAATGCTGGTGAAATGG # Right flank : CTGCCAAGTATCGATCATTCCATTCCAAGCTTAACTACGTAGAAGGAAAGGTCTGTCTGAAATCAGTACGCGCATACTAATTTCGGACAGACCTTTTTATGAATGAAGGAGGGTCTGGGGATAGTTCAACTGTTTCAAGTGAGAGTACTTTTCGACAATAACCAATTTCTTGACAAAAGCCACCGTCTATTCGGTGGTTTTTCATCAACTGAAGCGGGTAAAATAGTTAAGAAACATCCTGTGTCTCAATGTACTCACTTTCTCCATCACGCTGGGCATCCTGAAAATGATTGCTTACGACGATTTTTTTATGAAGTGAAATTAGAATTACTGGCTTTATGGTTGATTTGGTACGGGTAAATGGTTTTTAGCTTACTTTGTGAGGGCTTGAAATTGGTAATCTCTCATCCGCAGGCATCAATCCTTATAACAGTTATAGGCTGAGAGAAAAGTCTGTCCGAAATCGGTACGCGCGTACCAATTTCGGACAGACTTTTGTT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTAGCTTACCTATAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 3 67933-68370 **** Predicted by CRISPRDetect 2.4 *** >NZ_LOCK01000050.1 Desulfitobacterium hafniense strain DH Scaffold5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 67933 30 100.0 35 .............................. CATAATACTGAGCTGTATGACTATGGCTACCTGTT 67998 30 100.0 40 .............................. ATTATTTCGTGCATAATCTCCTACCCAATCACCATGCCAA 68068 30 100.0 41 .............................. GATACTCCTCCTTTTGTGCCAATCATTCATTCACGGTGCAT 68139 30 100.0 36 .............................. GGTGGATGCTAATTCGCTGGCATGAGATTTTTCCAT 68205 30 100.0 37 .............................. CTAATGAGTTTTGCCCGAAAAGAATATTTACCAATTG 68272 30 93.3 39 ..T..................A........ CTAAACACAATTGTTCCATTGTGGCAGGTTAATATTAAG 68341 30 73.3 0 ..T.................T..CCTTTT. | ========== ====== ====== ====== ============================== ========================================= ================== 7 30 95.2 38 GTCGTTAGCTTACCTATAAGGGATTGAAAC # Left flank : ACATGCAATAAGGACTATCTTGGAAATTACTTACGATGATCTGTTTAGAAAGTGAAATAAGAATCTATACAATTCTGGAGCTGGCTTATCGATTGAGCTTGGGCCTTTGAGAGCTTCATTCAAGTCACCTCCTGCCGCTTATTCTGGAGCAGAGGTGGTTACACAGAAAGGTTTTAAGAATTCTGAGAAAAATCCTTTTAAAGGAGTTTGTCTTTGATTTCATCGCTCTATATGCTAACATTATTTAGTAGGGTAAAATTGATGACCTGACGCTAAAGGGGTGAAAGAAGAGATCAGCTAGAGTTTATGATTCGAAGTACATGAGGTTAGTAAGCGGTTGGATTCAATTATGTAAATTTGTCGTCGATGTGCAGTAAGGTAAAAATACCCTGAGACCGACGACAAAGAATATGGCTTAATAAGCGGATTGAGGAGCAAAGGGTTAAGTTTGGATAATGTTGATGTTTGCTGAACTTGCTGATTTAATGCGGGTGAAATGG # Right flank : CTCGATAAAACAGACACTCCAGAGTTTAGAGATTCCCTCAGAATCGCAAGATGGCTTCTTTTTTCATCTCAGGTAAATACTCCAAGCTGCTCTCTCAGCGGCCAGCCCCTGAAACCCCGCCTCCGCCGGGTGGCAGAAGAACGGTCTTTAAACCGTTCTGAGGCATAAGGGTCTTGGCCATGTTAGCCAATCAAGGGCAAGGACTTCGTCTCGGCTGACGCCGCCCCTTGACAAGCATTTACTGAGTTGATAATCAGCATCACAGATAAATTTTTCCCGGCAATAGTGTCAGGTGTGACAACATTGCCGGGAAATTCTATATTAAGGGATTAAATATGGAGAATAAAAGCAGGCTATGATATACTGTTTCCATACAATGGATATTAAGGTCGATAGTGATAGTTTCATAACGGAGGATGATCACGATGTCAATGGATGTAGCGGAGATAAAAGATAAACTTTTTCCTATATTTGAGGCTGCCCCTATTTACCAGGCGATA # Questionable array : NO Score: 9.02 # Score Detail : 1:0, 2:3, 3:3, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTTAGCTTACCTATAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 4 73293-74119 **** Predicted by CRISPRDetect 2.4 *** >NZ_LOCK01000050.1 Desulfitobacterium hafniense strain DH Scaffold5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 73293 30 100.0 34 .............................. TTCTTGATCCACCATGCGGCCGATTCCTGGGCCG 73357 30 100.0 38 .............................. CGATGCACATCTATTCCACCGGATACCCCGACATTATC 73425 30 100.0 35 .............................. AAAGAACAAATTGATAATGCGCGTGAAGAATTCAA 73490 30 100.0 36 .............................. TAGTCATACCAATCAACATGAAGATCGTAGGCCAGC 73556 30 100.0 36 .............................. CGATATGCTTCAACATAACCATCAGCACCGGGATAA 73622 30 100.0 37 .............................. AGTGTAACTATTGTCCCGATATTCTAAAAACCAATAT 73689 30 100.0 35 .............................. GCACATCTTTGACGCCCCCCAATCTCCCTGCTAAA 73754 30 100.0 36 .............................. GGGATTTAGAGCGCGCTATAAAGCAGCATGCCCAAA 73820 30 100.0 36 .............................. CCGTCTTTAACCAATACAACCCAGATCTGCGCCAAT 73886 30 100.0 39 .............................. AGCAAAAGGATTATGGGGAAGCGTTTGATATAGGACGAA 73955 30 100.0 38 .............................. AGCTGAAAAAATATGTTTCCTACGCAGCCAAAAAGGAA 74023 30 100.0 36 .............................. AGGAATGCCAACAAGCACCATGCCGGGGGAACCTGG 74089 30 80.0 0 .G...............A...A.C..G.G. | A [74110] ========== ====== ====== ====== ============================== ======================================= ================== 13 30 98.5 36 GTTGTTAGCTTACCTATGAGGGATTGAAAC # Left flank : TGACTAAGCCGATACTCTATAAGGTCTACCCGGAAGTATCTTATCCGGTGGCGGAGGGAAAGGAAATTGAGATGAGGACAGTTGTGCCTACGGCTCTTATCCGGGAGATCGTTCTCAAGGCGGATCGCTACTATTGCCGGGCAGGTGGGTATTTGTATGAGTATAAAGGGCAGCGGACCTTTGAGAAATCAGTGGATTTCCTTTATGAGAAAGACGGGAAGCCTATTGCGTTTATCCCTAAAAGCGATGGCCCGGATTCGCCTTTGGATCTCAGAGTGGCGCAGTTTGGAGAGGACTTGGTATGTCTTGTTTAATGGCCTTGGCTTAATGGGCGGAGATTATTTTACTATATGAAATTGTCGTCGGTGTGCAGTAAGGTAAAAATGCCTGGAGACCGACGGCAAGGACTATGGCTTAACAAGCAGCTTGTGGGGGAAAACGCAGATTCTCCGGGCTGAACTTGTTAAGCCATAAATGCTGATTTTATGCGGGTAAAATGG # Right flank : CACAGAAATTACAAAAATAATATCACCGTAGCTTAGTGTAATGTAAAAAATATGTGTAATACATTTCGTCGGCTGCAGCTTCTGGGATTGTATTACAAATATCGTTATGGTAACATAAAATTCAGGAGGGATAAGGCATGGACAAGTTAGATATTATTTTGCAAAGGTTGGATAGTCTCGATCGTATTGAAGCTGAGATTAAGGCGTTAAAAGCTGATCATCGAGAAACATATAAAAAACTTAGTAAGATTGATGAAATTTCCGTTATGCAAGGATTAACATGGAGAGCTATTCAGGAATTAAGGGATGATAAAACTGAGTTGAACGAACTCCGCAAGAGAATAGAAATTTTAGAATCAAAATTAGCAATGTAATACATACCCGGTCCGCATCTCCGCGGCCGGCTTTTCTTTTTGTATTATAAAATTTCTGGAGCGGGGTTGTTAGCTTACCTATGAGTTGAAATTTTGCGACCTATTCAGCAAGCCCTAATTACAACG # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTAGCTTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 5 75745-77096 **** Predicted by CRISPRDetect 2.4 *** >NZ_LOCK01000050.1 Desulfitobacterium hafniense strain DH Scaffold5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 75745 30 100.0 36 .............................. CTCATTACTATCTACTCCTTACCAAATCTCCATTCC 75811 30 100.0 40 .............................. AGATAGTAGGTGTCAGTGGCGAAAAGAAGCTTTTCTCCGG 75881 30 100.0 35 .............................. AATAAATACTCCGACATTTTTTACTCATCATAACA 75946 30 100.0 35 .............................. GTTGAAGTAGGCGCCTTGCTTGATGTCGTGGATGT 76011 30 100.0 33 .............................. GCAACTGCCAGTTCCTGCAACACTGCATTGTCG 76074 30 100.0 36 .............................. TTTTCATTCCAACACAACTCCCCTATTCTCCCGCAT 76140 30 100.0 39 .............................. AATGCAAATTCTTCCTTGTGCAAATCAATGCACCTCCTA 76209 30 100.0 37 .............................. TCAATAAACACCATCAACATCGGCAAAGCCCTCCTTA 76276 30 100.0 35 .............................. AGGAAATACTTAATCAACCTGAGCAAAAGGAATTC 76341 30 100.0 37 .............................. GGCGAAATGATAACGACATGGGAACTTCCCGCAATTG 76408 30 100.0 36 .............................. ATGCAGGGGTGGCTAAAATGAGTGCGGAAGCCCTGA 76474 30 100.0 37 .............................. CTCCGTAATCGACGATAACCAGAATGGGACCATATCA 76541 30 100.0 35 .............................. ATTTATCACCTCCTAAGTACAGTGCAGCAAATTTC 76606 30 100.0 36 .............................. TATACCAAGGCAGTAAATACCCATTGGCATCGATCA 76672 30 100.0 36 .............................. ATTTTGTAATCGGAGTGTTTACGGGTGATTGGGAAA 76738 30 100.0 38 .............................. ATTGACCCCAGAAACGCCGTATGGCCTGCCCGGGTATA 76806 30 100.0 36 .............................. CTCGAAACTACTGTTCTACTGGCCGATGAACAGATC 76872 30 100.0 34 .............................. CCCAAACCTACGCCGAAGCCCTCCGCGAACTATC 76936 30 96.7 35 ....................A......... ATGATTCGAGTAATTTTACATTAGCCTGCAATTCA 77001 30 93.3 36 ........T............A........ TAAAAAATGTGACCCTCTTCTTGTAATCGCCCTAAT 77067 30 90.0 0 .................A...A.......T | ========== ====== ====== ====== ============================== ======================================== ================== 21 30 99.0 36 GTTGTTAGCTTACCTATGAGGGATTGAAAC # Left flank : CTGCATGGGATAAATTTAGCCTTGATGAAAAGGCTTTGAAATTTTCAAAGTATATGGCGGAGCTCTGGAAGATACATTGCTTTCGAGAAGGGAATACAAGAACTGTAGTGACCTTCTGCTGTCAATTTGCAGAAAGCAGGGGATTCAGCGTAGATAGAACATTATTTCAAAAACATAGCGCTTATGTAAGAACGTCATTAGTGGCAGCATCAGCCTACTTTTCGGATCTAGGAGATAGAGCGCAGCCTGAATACCTGATTAGAATTGTTAGGGACAGTATCGAAAGAGGACGAAGGAAAGCCTAGCAGAGAAACGTTTAATTATAAGACAAGAAAGAGCATAAGCGTTACATTGAAGTTGTCGTCGATGTGCAGTAAGGTAAAAATCCCCGGGGATCGACGACAAAGAATGGGGCTTGGTAAGCGGACTAAAAAGAAAATGGCTGATTTGGTTAATCTTGATCAATGGCTGTAATGGCTTATTTAATGCGGGCGAAATGG # Right flank : TATGAACTTGGTAGGGCTTTGTTTGATGTTCGTTATCTTGAAAAAAGTTTCAAGACCCTTGATAATTCCCTTAAGGCCTGTGAGCAGAGTTTAAAGAATATATGTAATACATTTCGCTGGCTGCAGCTCCTGGCATTGTATTACATATATCCTTGTGGTAACATAAAAATTAGGAGGGATAAGGCATGGATGATAAATTAGATTTGATTTTAGACAGATTAACGGCAATGGATAGAGGCTTAAAAGCTGAGATAAGTTCTTTAAAATCTGAGATAGGTTCTTTAAAACCCGAAATAGGTTCTTTAAAATCTGAAACTCAGGCGATTAGTAAAAAGGTGGATATGACATGGAGAGCCATTCAGGAATTAAGGGATGATAAAACTGAGTTGAACGAACTTCGTAAGAGAATAGAAATTTTAGAATCAAAATTAGCAATGTAATACATACCCAGATGGCAGCTCCGCGGTCGGCTTTGCCCGGGGATGGAGGCGAAACATCGG # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTAGCTTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 6 82743-84485 **** Predicted by CRISPRDetect 2.4 *** >NZ_LOCK01000050.1 Desulfitobacterium hafniense strain DH Scaffold5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 82743 30 100.0 38 .............................. CTTGCTCACTGACGTCAACTACGTACACTGGCTCCCCA 82811 30 100.0 39 .............................. ATATGGGAAGACCATGGAAAGATACAGGAAAATTGGCCT 82880 30 100.0 36 .............................. AAAACCTTGGCAAAGAGGCAGTCATTAAAGGCAAGG 82946 30 100.0 35 .............................. CCTTTATCGCCTCCATGACCTTTGCATGGGGCATG 83011 30 100.0 37 .............................. CTTGAGTATAAGGAATTTGGGAAGAAATCAGTCGTAG 83078 30 100.0 38 .............................. TACACTTAATGTTTATGCCTAACCTAGTCAATCCTCTT 83146 30 100.0 35 .............................. AAATTTTTTTCTAGCATAATTATTCAACCTCTTTC 83211 30 100.0 35 .............................. TTAAGTTTTTCAAGTGATTTAATTGCTCTTTCTTT 83276 30 100.0 35 .............................. TCTACTTCAACCTCAAATAAATGACTAGCCTCTTT 83341 30 100.0 35 .............................. TGTAATGTGGTCATAATAATCATGGCCTTGTATCC 83406 30 100.0 35 .............................. TGAGGAGGGAGTACGGAAGTTGGAGTACATACTAA 83471 30 100.0 35 .............................. CTCCACTAGTAAAATTAACTTCTCTGCTATCAATA 83536 30 100.0 35 .............................. CTTCTTGTCTCAGGCAGGGATCACGGAGATGAAGC 83601 30 100.0 36 .............................. TAAGGAAGGCCGCAGTTAAGGCTACAACCACAGTAA 83667 30 100.0 36 .............................. TGTTTTTTACCTTAATTTCTCCAGTCTCATCATTTA 83733 30 100.0 36 .............................. CTTTCATATCAAATTCTCCTTTCATCAACTATTCAT 83799 30 100.0 36 .............................. ATTTTAGTCATCTCAATTCCTTCTTTCTTTTTAAAA 83865 30 100.0 36 .............................. TGTTCTATCCTGACTAAATCACTCGGATATAAGCAG 83931 30 100.0 35 .............................. TATAAATTCCATCCCTTTCAATATCAATCTCTCTA 83996 30 100.0 36 .............................. TCAGGGAATGTATCTCAGGAAGACATAACAAATCTA 84062 30 100.0 34 .............................. CTGCTGAAAAAGACGGGCAAGGATTGGGGCGCAG 84126 30 96.7 36 .................G............ ATCTCTGATAATGCGGTTAAGTTATTCGTCTCCCTC 84192 30 96.7 35 .................G............ GTCAATGCGCTGCCTAATGGAGCGACGAAGACGGA 84257 30 96.7 35 .................G............ AGCGTTAGCTCACTAAGACCCTCAAGGCGTTTTCC 84322 30 96.7 36 .................G............ ATGCGACTCCAGTCTCCGTCTCAGCCCTAGAAGATA 84388 30 93.3 38 ........T........G............ AATACATTAAGCTTTTCCGACAAATCGGAACGGTCTAG 84456 30 90.0 0 .......A.........G...A........ | ========== ====== ====== ====== ============================== ======================================= ================== 27 30 98.9 36 GTTGTTAGCTTACCTATAAGGGATTGAAAC # Left flank : GAGAACACTATCGAATAGACGGTATGCAGCGACTTTTGAAAGGGATAGGCATAAATTTGGGGGAGAGAAAATCCGGAAGATGAGGTATAATTATGTTTGTGATCTTAGTCTATGATATGGGGGAAAAGCGGGTAGCCAAAGCACTGAAGCGGTGCAGAAAGTACCTGAACTGGGTGCAGAATTCTGTCTTTGAGGGAGAGATTTCGGAAAGCAATCTGGCAAAGCTGAAGATGGAGCTGGACAGGATTATAGTGCCGGAAGAAGATTCGGTTATTATTTATACACTGAGGACGACCCGATATTCTGAGCGGGAGATCATGGGCTTGCGAAAAGGAGGCCAGAATTTAATCATATGAAATTGTCGTCGATGTACAGTAAGGTAAAAATCCCTGGAGATCGACGACAAGGGATGTCGCTTAGTAAGCGGTCTGCTGAGAAAGGTGGAATTTTTGAGATGGCTTTGGGGAGCTGTAGATGTTGATTTTATGCGGGAAAAATGG # Right flank : CTGCCGATTGAGGATTCCCGGGAGTCTTTCACCGCGGGTGTTTGACCTACCTTAATTCGGTTTACTAGCGGGCCGTGAAACGGGCTGCTGACAACGCAACAGGCTGTATGCTCCCATAAGAGGGAGTATACAGCCTGTTTGTTGTGGGGGATGGGTGTGAGAGCCATGCCCGCCAGAATCCCTGTAAGGAGAACGAGCAGAAAGCGAGCGGAGAGCTGGACGATGATGTCGCGGCTTGTAAATCCATAGGGTCATGAGCAGTGCCCCAAGGAATCCTCTGGCAGAGACGCTTCCGGGCGATCGTCTGGGCGACATAACCGTCGATATCGGCAATCTTGGCAAAGGGAAACTGTCCGGTGTAGTCTCTTACCTTGTCACGAATAGAACTATTGGGAGTTATTGGAGGAGGAAAAAAGACAGTTGTTCGCACAATGCTGACTCGGGAATCGGAACATTGATCTTGACCTTGCCCCTGCTCCCTGCTTTCATTCTTACTCTTT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTAGCTTACCTATAAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA //