Array 1 27-524 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMJV010000002.1 Bifidobacterium angulatum isolate MGYG-HGUT-02397, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 27 36 100.0 30 .................................... GATTGGATTACGCAGACTCAAGGCCGATAT 93 36 100.0 30 .................................... CGCTCTACGACGTGCCAAAGGAAAAAGTCA 159 36 97.2 30 ..........C......................... GGAGCAGCCCGGATCAGTATGAGACGGATA 225 36 100.0 30 .................................... TGACTCGGATTCCCCAGCCGGTCAGGCCGA 291 36 94.4 30 ..........C.........T............... TTGCTGCCTGCGGGGATGAGGTGGAATCGT 357 36 97.2 30 ..........C......................... AAACGAGATCAGCCTAATCGCGCTCAACCA 423 36 94.4 30 ..........C..............G.......... CCTTGTCAGGGAATCCGTAGTGGTCTGTGC 489 36 86.1 0 ............................C...TATG | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 96.2 30 GTTTCAGATGTCTGTCAGATCAATGACCTAGACCAC # Left flank : GGTACGGCCAAGATAGGCAACGAACAG # Right flank : GGAGATGACACTCTTTTTGAAAATGGCTTAGATGCTGCAGTTTTCCTGGCTGTGCCTTCTGCAGGTAAGGAAAAATCATTATCTGTAGTTATATTCGCCGCTTAACTACATTTATCCGAATAAGTGTAACTAACGAGTGGCTTAAGCTACACTTATTGCGATAAGTGTAGCTAACAAGAATCAGAGCGACAGATAAAAGCTCTTGATTCTCCTCGTGGTTGCAGTGCATAGTAATTAAAGGCTCTACTACAAGCTGTTATTCAATGTGTTTAATGCTCCTGCGCTTATATACCACATCCCGGCCAGTCCAGCACAGCTATTGGTTTTTCCTGGGTATGCTTATTCCGGTTGTGTATTTATCGGGGAAGATAGCCCGTCTTGGGTTATCCAAAACTAGTGGGGGAAGAATAATGGATTTCTTTGTGTCGTTATGGAACGGGTTCATGGTGTGGCCGGCATCGTTTCGGTACCTGGTATTGGCTGTAATCGTTCTACTGTTT # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGATGTCTGTCAGATCAATGACCTAGACCAC # Alternate repeat : GTTTCAGATGCCTGTCAGATCAATGACCTAGACCAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.30,-3.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 829-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMJV010000013.1 Bifidobacterium angulatum isolate MGYG-HGUT-02397, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ================================ ================== 828 35 100.0 30 ................................... AGGCACCGCACCGTACTAGCCCGTCAAGGG 763 35 100.0 32 ................................... ATCTCCTTTATGGAAAAGCCCCGCACGTGGGT 696 35 100.0 32 ................................... TAAATTAATGACGTTAATATCCTGCATATTGG 629 35 100.0 31 ................................... TCATGGGCGTTCGGCGTACACTGTGCATGAG 563 35 100.0 31 ................................... TCACGACACAGGAAGATGTTCTGGTACTCAG 497 35 100.0 32 ................................... GTTGTAATCATGGCTGATATCTACCGCACAGT 430 35 100.0 32 ................................... ACGACTCTTTGTGACCATACTTCGATGGAGGT 363 35 100.0 31 ................................... TCACAAGGTGAAAGGTAAGAAGAATGCTGTG 297 35 100.0 31 ................................... TTGCGTATAAGGATAATAAGCCGGATTGTGG 231 35 100.0 31 ................................... CTCTCTTCTGATGATGAAGTTTTCTGAATAG 165 35 100.0 31 ................................... GCAGGCCGTTGCGGACGAGGGCGACGTAGAG 99 35 97.1 31 .............C..................... CACGCGAAGCCAAGCGACCCGGTTGTGTCGG 33 32 91.4 0 ................................--- | T [4] ========== ====== ====== ====== =================================== ================================ ================== 13 35 99.1 31 TTTCAGATGTCTGTCAGATCAATGACCTAGACCAC # Left flank : CTGCTGCAGCGCGTACGTGA # Right flank : C # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTCAGATGTCTGTCAGATCAATGACCTAGACCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.50,-3.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-11.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 1 39-203 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMJV010000015.1 Bifidobacterium angulatum isolate MGYG-HGUT-02397, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ================================ ================== 39 34 100.0 31 .................................. CTGCGTTGCCTTACTCCCGACGCTTGCAGCT 104 34 100.0 32 .................................. ACTACGATGCGCCAAGCTGAATGGTCAGCAGG 170 34 100.0 0 .................................. | ========== ====== ====== ====== ================================== ================================ ================== 3 34 100.0 32 GTGGTCTAGGTCATTGATCTGACAGACATCTGAA # Left flank : TCTGAAACGGTTTGGGGCATCCGGTGCGCCTGAGCTGTG # Right flank : ACTTGTTCCGTATCCCTGTTTTAGGAGGATA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCTAGGTCATTGATCTGACAGACATCTGAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.88%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.50,-3.30] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [25.0-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 263435-264197 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMJV010000003.1 Bifidobacterium angulatum isolate MGYG-HGUT-02397, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 263435 36 100.0 30 .................................... TCCTATACACGTACGGAATGCGAATCGTAG 263501 36 100.0 31 .................................... CACGGCGTACAGGCATTACCACGTGAGACAA 263568 36 100.0 30 .................................... TCTGATTCATTCAGTCTGTTTGTTTGGTTT 263634 36 100.0 30 .................................... TTTGGACTAATCAAGGCGGGCACATTCATC 263700 36 100.0 30 .................................... GTCGGCCATCACTCACCCGAGTAGGCCGTA 263766 36 100.0 30 .................................... CTCCTTCACTGGTTCCGGCGTGGATGCCAA 263832 36 100.0 30 .................................... ACGCCACGGTGTCCAGCCAATGCTCGAAGT 263898 36 100.0 30 .................................... CGTAAGCCCATCGAGGAAACCGGTAACGAA 263964 36 100.0 30 .................................... GTGGTTAGGGGGCATGTGTATACGTTTATA 264030 36 100.0 30 .................................... TGGCCGTGGCGTCCCTGGCTGCGGCGTGCC 264096 36 100.0 30 .................................... CAAAACCGACAATTACGCCCTCAATCTCTA 264162 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 12 36 100.0 30 GTTTCAGATGTCTGTCAGATCAATGACCTAGACCAC # Left flank : ATTGTGCTGATGCTGTTGATTATGATGCATTATTTCAGAAAGCGGCGATTAAGCGAATTCTTGATGAGTTTGACCCTGATAAATTAACGAGGATTCTGGCGCTTCAATCAGAATTGAAGACAATAATTCAGAATGAAATTTGGAATGATGATTTGCCTTTGACTATTTCATCTTCTTTGGATTTAAAATCTGCCGTAATGATGACTAAACCGCGTGTTGATCTAGGCTCTGTGGGGTCCCTTTTTGATAAAATTCAACTGGTAGTTAATACTGCTGGTGCTCTTGCCGAGAGCAAGATGCTCGTGATGCTTCATACAATTCAATATTGTGATAACGACCAATTAATGTATTTGCACAAAGACCTATTAAGACACCATATGCAGCTTCTTGACCTGGAACGCTGCAACGAGAAGATCACCCTGACAGGGGGAAGAAGCTATTATGTTGACGGAGATTATGTTCAATTTTCATGAACTGTTCAGCAATCTCCAAGACTATCG # Right flank : | # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGATGTCTGTCAGATCAATGACCTAGACCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.30,-3.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //