Array 1 8639-6888 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNGE010000015.1 Streptococcus salivarius strain 1001175B_160314_H3 NODE_15_length_55386_cov_82.8028, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 8638 36 100.0 30 .................................... AATGTATCATTCCATAGTGCCTTCAATGAG 8572 36 100.0 30 .................................... AGGCTTCGAACAAACAAAGAACTACTTCAC 8506 36 100.0 30 .................................... GTAGTGGTTTCAGCCAAACCGACACTGACA 8440 36 100.0 30 .................................... GTTTTCATCCTCTTCTTCTACATTACTAGA 8374 36 100.0 30 .................................... CCCAACGTGGAGTGATATTAATAAAGTCCT 8308 36 100.0 30 .................................... CTACTGCCATGATATCCCTATTGCAGTGTT 8242 36 100.0 30 .................................... TGTTATCCTGTAATGCTACAGAATTACCCA 8176 36 100.0 30 .................................... TCTACAATCAATCCCAGTCCACTATGACAT 8110 36 100.0 30 .................................... GTAACAATGAAGCTAATATCAAGCAGCTTA 8044 36 100.0 30 .................................... TGGTTTGCGAGATTTTAAAAAAGGTATATA 7978 36 100.0 30 .................................... AGGGCCTGTGCAAGAAATAACATCTATACA 7912 36 100.0 30 .................................... TAAATATCACATCCAATCATCTGATTTATA 7846 36 100.0 30 .................................... CAGATATCTAGCTGGTCTATGTACACCATC 7780 36 100.0 30 .................................... CCCATGACCGAAAATGAAATCCGTAGGGCA 7714 36 100.0 30 .................................... AATCAATCAAAACGGTGTAGCGTTTGGTTT 7648 36 100.0 30 .................................... GTGCAGCTTTTTCCGCATAGCACAGATTGA 7582 36 100.0 30 .................................... TTAGTCAGATTGATATTTCCGTTAGGTAAT 7516 36 100.0 30 .................................... ACCGTCCCTTCCTTGCCATCCGCAGCCTTC 7450 36 100.0 29 .................................... GCTTGGTTGCGACAAATTCAAAGTGAGTC 7385 36 100.0 30 .................................... ATGTGGATACTGGTGAGCCTACAGCGCTTA 7319 36 100.0 30 .................................... ATCACGGCAGTGGTCAAAGGTATCCACGCA 7253 36 100.0 30 .................................... CAAATCAGCCAATTTAAGCAAATCACAATT 7187 36 100.0 30 .................................... GCAGCGTTAGAGATATGACGACCAGCGTAT 7121 36 100.0 30 .................................... TATTTTTCAGAAAGAGGAGAATTAGGGGAC 7055 36 100.0 30 .................................... AGTAGAAGGCTTTTCAATGGCTTTCGAAGG 6989 36 100.0 30 .................................... TGAACTAATTAAGACGATTGGAGAACACAA 6923 36 80.6 0 ............CC...............T..CCCT | ========== ====== ====== ====== ==================================== ============================== ================== 27 36 99.3 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : AAGAGAATTTTGGTGTTCGTCAATAGTTTGTCGTATTTTTCTAATGATGAAATTTATCAAATCTTGGAATATACAAAGTTATTACAAGCTGATGTATTATTTTTGGAACCTAGAAAGATTAAAGGTATTCAACAATTTATTTTGGATAAGGATTACATTTTGATGCCTTACAATAACTAGTAATTTGGTAATAAGTATAGATAGTCTTGAGTTATTTCAAGACTATCTTTTAGTATTTAGTAGTTTCTACATGAAGTTGAGTGGAAGAATCATTTTGTTAGAGAGTAGGTTATAAGCTATCTGATAGGTGAGAAGGTAAGTTGATTGGAAAAAGATTTCTAAAATTTTTTCGATATAGCGACAGCTCTATTTGTTAAAACGTTGTTATATAAGGCTTTTTAAGGTATAATAAACATAAAAATGGAATCATTTTGAAGCTGAAGTCAGGCTGAGATGAATAGCGCGATTACGAAATCTGGTAGAGAAAAATGACCTACGAG # Right flank : CTCTTTGTAACGATTTTGGGTTGACTTCTCCTTAAACTCATCCTATCATAGAGGAGTCTAGTATTGAAATGGGGGAAGAGACATGTTATACGAATATCCAGCGATTTTTCACACGATTGAGGAAGGTTATCAAATTAGTTTTCCTGACTTTGGTCGTAGCATTAGGGCAGATTCTTTGCCTCTTGCCATGACGAAAGCATCTGTGTTTTTATCACATATTATTAAAGGGTATGAAGATAAGCCTTTACCTGAGCCGACTGCGGTTAGCAGTATTCCTAATGAGGAAGAACTCGTCGTGTTGATTCAAACAGAGCTTGATTAAGACTAAAAAACTCTCGGAAGATTAATTCCCGAGAGTTTTAGGTTTTATTGGCTACATAGACGCCCAGGACGACTAAAATGCCTGCAAAAATTTGTAGCTGCGAGAAGGGTTCTCCTAAGACGACAACAGCAGCTAGAATTGAGATAATGGTCGAAATCCCAATAAAGGATGCTGTTCG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //