Array 1 78893-79044 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHMMC010000006.1 Streptococcus pneumoniae strain S307 Spne_S307_ctg6, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence             	Insertion/Deletion
==========	======	======	======	================================	============================	==================
     78893	    32	  96.9	    28	.............................C..	ATGGTACTACCTCAACAGCAATGGCGCT	
     78953	    32	 100.0	    28	................................	ATGGTACTATCTAAACGCTAATGGTTCA	
     79013	    32	  96.9	     0	.....A..........................	|                           	
==========	======	======	======	================================	============================	==================
         3	    32	  97.9	    28	ATGGCGACAGGATGGCTCCAAAACAATGGTTC	                            	       

# Left flank :   AAGTTAAAAAAGCGGAGCTTGAACTAGTAAAAGAGGAAGCTAAGGAATCTCGAAACGAGGAAAAAATTAAGCAAGTAAAAGCGAAAGTTGAGAGTAAAAAAGCTGAGGCTACAAGGCTAGAAAACATCAAGACAGATCGTAAAAAAGCAGAAGAAGAAGAAGCTAAACGAAGAGCAGCAGAAGAAGATAAAGTTAAAGAAAAACCAGCTGAACAACCACAACCAGCGCCGGCTCCTCAACCAGAAAAACCAACTGAAGAGCCTGAGAATCCAGCTCCAGCTCCAGCTCCAAAACCAGAGAATCCAGCTGAAAAACCAAAAGCAGAAAAGCCAGCTGATCAACAAGCTGAAGAAGACTATGCTCGTAGATCAGAAGAAGAATATAACCGCTTGACTCAACAGCAACCGCCAAAAGCAGAAAAACCAGCACAACCATCTACTCCAAAAACAGGCTGGAAACAAGAAAATGGTATGTGGTACTTCTACAATACTGATGGTTCA
# Right flank :  ATGGTACTACCT

# Questionable array : NO	 Score: 2.57
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATGGCGACAGGATGGCTCCAAAACAATGGTTC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [10,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-1.90,-2.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [1-1] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [61.7-11.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.64,0.37   Confidence: LOW] 

# Array family : NA
//