Array 1 32562-31007 **** Predicted by CRISPRDetect 2.4 *** >NZ_AFIM01000081.1 Streptococcus anginosus SK52 = DSM 20563 strain SK52 contig00059, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 32561 36 100.0 30 .................................... TATACTGTTTTAATCCTCACACTCAAAGTT 32495 36 100.0 30 .................................... ACTAGCGTTAGAGCACGCACTACAGCATAT 32429 36 100.0 30 .................................... CTCAAAATGTGTCTTACCATACAGCGCAAT 32363 36 100.0 30 .................................... ATTCCCGCGAGGAATATAAGTAATTCTCAA 32297 36 100.0 30 .................................... ACGGCGAGACCATGAGTGGTAAGTCTTATC 32231 36 100.0 30 .................................... TGATAAAGAAAGATAGGAGGTGAGTATCAT 32165 36 100.0 30 .................................... GCTTCTACTAATTGTTCATTCAAAGCGTCA 32099 36 100.0 30 .................................... TAATCAAAACATCCAGCAACCAAGGCGACA 32033 36 100.0 30 .................................... TGCTATCTTTCTGCTATAATAAAAGCAGAA 31967 36 100.0 30 .................................... ATTCTTCTTCAAAGCTCGACGAATGAGCTT 31901 36 100.0 30 .................................... TTGGCGGGCGCGTTTGTCAATCACTTAGAT 31835 36 100.0 30 .................................... AAAATAAGGTTTTGAATTTTCTTCTTCTTC 31769 36 100.0 30 .................................... AATTTTTAGCCCCTCCATTTCCTCGACAAA 31703 36 100.0 30 .................................... TAAAGGGGAACGTGTTGACGTTCGTGGTAT 31637 36 100.0 30 .................................... GTCCTAGCTCAAAATCTCTGAAACTCCTAT 31571 36 100.0 30 .................................... AATTTTTAGCCCCCCCATTTCCTCGACAAT 31505 36 100.0 30 .................................... CTCCTGTTTTGCGCCCTTGGTTGCTGATAT 31439 36 100.0 30 .................................... CCCAATATTCGCTTTAAATTGTTCTGTCAT 31373 36 100.0 30 .................................... GAAACTGGTCGATTATTGGGTAGTCCCTTA 31307 36 100.0 31 .................................... AAGTCGGCAAGTGATGATGAGTTGCAAAGAA 31240 36 100.0 30 .................................... TAAAGGAATGTTGAAAGAACCATTTTATAA 31174 36 100.0 30 .................................... CAATCAGATTATTAAATTCCCCTAATTTGG 31108 36 100.0 30 .................................... ATTATTTAGGATCAAAGCGAAGGTTGCATT 31042 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 24 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : ACAGTTGAATGAAAAGTCTGAAGTGAAATCTATGTTAGAAAAATTAGTTGCAACTATTACAGAACTAATTGCTTTTGAATGTTTAGAAAACGAGCTGGATTTAGAGTATGATGAAATAACAATTTTGGAATTGATTGATGCTTTAGGTGTAAAAATTGAAACACTAAGTGACACTGTTTTTGAGAAAAGTTTAGAGATTGTTCAGGTGTTTAAATATCTTTCTAAAAAGAAACTGCTTGTCTTTGTGAATGTATCATGTTATCTGTCTGAACATGAACTAGCTAAATTGGTAGAATATATTCAACTTCATAATATAAATGTACTGTTTGTTGAACCAAGAAAAGTATACGACTTCCCTCAATATGTAGTGGATGAGGACTATTTCTTATCTTGTGAGAATATGATATAATATTAGTAAATATAAGGAATCATTTGAGCTGAAGTCTAGCTGGGACGAATGGCGCGATTACGAAATTTCGAGACAAAAATTGGTCCACGAG # Right flank : ACAATACATTTTAATCATAGGGCTTGCAAATTTTTCCAATCGTGTTATAATACTTTTTAGAGACATATCACCTACAGGAAATCTTTCAGAGAGCGTGTGGAGCTGGGAATCACGCAGAGGATGTAGCTGGGACTACTCGATTTATTTTTATGCAAACATAAAACGGTGGCTACGTTAGAGCCAATCAGAGGTGTCAACAAACTTTTTTGTTGTACATGAATGAAGGTGGAACCACGTTGCGACGTCCTTTTAGGATTGCCGCTTTTTATTTTGTCGGAAGGAGGAAGAGTTATGCTCTATATGATTGGTGGATCGCCTTGCAGTGGGAAGTCAACAATTGCCTCCCTTCTTACTCAGCAGTATGGGCTGCTTCATATCAAGTTAGATGATTTGACAGACCAGATGATGGATCAAGCAAGAGCGAACGCAAAGCCGATTTCCCTTCTGAGACAGGACAGAAGTCCGGATCAAATCTGGCTGAGACATCCAGAGGAGATGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //